RNA–Protein interactions for RNA: ENST00000587094.2

PTBP1-211, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 273 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-211ENST00000587094 PHRF1Q9P1Y6 1649 aaKnown RBP16.67■□□□□ 0.26
PTBP1-211ENST00000587094 GPRASP1Q5JY77 1395 aa16.66■□□□□ 0.26
PTBP1-211ENST00000587094 FAM83GA6ND36 823 aa16.65■□□□□ 0.26
PTBP1-211ENST00000587094 PAK3O75914 559 aaPredicted RBP16.65■□□□□ 0.26
PTBP1-211ENST00000587094 COL14A1Q05707 1796 aaKnown RBP16.64■□□□□ 0.25
PTBP1-211ENST00000587094 NUTM2GQ5VZR2 741 aa16.63■□□□□ 0.25
PTBP1-211ENST00000587094 CABP2Q9NPB3 220 aa16.62■□□□□ 0.25
PTBP1-211ENST00000587094 ACEP12821 1306 aa16.62■□□□□ 0.25
PTBP1-211ENST00000587094 ATAD2Q6PL18 1390 aa16.62■□□□□ 0.25
PTBP1-211ENST00000587094 CENPJQ9HC77 1338 aaPredicted RBP16.61■□□□□ 0.25
PTBP1-211ENST00000587094 CCDC9Q9Y3X0 531 aaKnown RBP16.6■□□□□ 0.25
PTBP1-211ENST00000587094 POLR3AO14802 1390 aaPredicted RBP16.6■□□□□ 0.25
PTBP1-211ENST00000587094 VPS72Q15906 364 aa16.59■□□□□ 0.25
PTBP1-211ENST00000587094 NBPF8Q3BBV2 869 aa16.59■□□□□ 0.25
PTBP1-211ENST00000587094 BTG4Q9NY30 223 aa16.59■□□□□ 0.25
PTBP1-211ENST00000587094 SRPK2P78362 688 aaKnown RBP16.58■□□□□ 0.24
PTBP1-211ENST00000587094 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
PTBP1-211ENST00000587094 PPIP5K1Q6PFW1 1433 aa16.58■□□□□ 0.24
PTBP1-211ENST00000587094 NRKQ7Z2Y5 1582 aa16.57■□□□□ 0.24
PTBP1-211ENST00000587094 SEPT12Q8IYM1 358 aa16.57■□□□□ 0.24
PTBP1-211ENST00000587094 PLEKHG3A1L390 1219 aa16.56■□□□□ 0.24
PTBP1-211ENST00000587094 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
PTBP1-211ENST00000587094 ROCK2O75116 1388 aaKnown RBP16.55■□□□□ 0.24
PTBP1-211ENST00000587094 KIAA0232Q92628 1395 aa16.55■□□□□ 0.24
PTBP1-211ENST00000587094 ZC3H6P61129 1189 aaKnown RBP16.54■□□□□ 0.24
PTBP1-211ENST00000587094 FAM98CQ17RN3 349 aaKnown RBP16.54■□□□□ 0.24
PTBP1-211ENST00000587094 AKAP12Q02952 1782 aa16.54■□□□□ 0.24
PTBP1-211ENST00000587094 PRDM11Q9NQV5 511 aa16.53■□□□□ 0.24
PTBP1-211ENST00000587094 CABP1Q9NZU7 370 aa16.52■□□□□ 0.24
PTBP1-211ENST00000587094 PIK3C2AO00443 1686 aa16.52■□□□□ 0.23
PTBP1-211ENST00000587094 THSD7AQ9UPZ6 1657 aa16.52■□□□□ 0.23
PTBP1-211ENST00000587094 LMO7Q8WWI1 1683 aa16.51■□□□□ 0.23
PTBP1-211ENST00000587094 A0A0G2JS52 829 aa16.51■□□□□ 0.23
PTBP1-211ENST00000587094 ONECUT3O60422 494 aaPredicted RBP16.51■□□□□ 0.23
PTBP1-211ENST00000587094 MYT1Q01538 1121 aa16.51■□□□□ 0.23
PTBP1-211ENST00000587094 ABTB2Q8N961 1025 aa16.51■□□□□ 0.23
PTBP1-211ENST00000587094 FAM182BQ5T319 152 aa16.5■□□□□ 0.23
PTBP1-211ENST00000587094 CAMTA1Q9Y6Y1 1673 aa16.5■□□□□ 0.23
PTBP1-211ENST00000587094 SPATA31A5Q5VU36 1347 aa16.49■□□□□ 0.23
PTBP1-211ENST00000587094 SPATA31A7Q8IWB4 1347 aa16.49■□□□□ 0.23
PTBP1-211ENST00000587094 USP6P35125 1406 aa16.49■□□□□ 0.23
PTBP1-211ENST00000587094 STRN4Q9NRL3 753 aa16.49■□□□□ 0.23
PTBP1-211ENST00000587094 RGPD5Q99666 1765 aa16.49■□□□□ 0.23
PTBP1-211ENST00000587094 USP19O94966 1318 aa16.48■□□□□ 0.23
PTBP1-211ENST00000587094 KRT27Q7Z3Y8 459 aa16.48■□□□□ 0.23
PTBP1-211ENST00000587094 EVC2Q86UK5 1308 aa16.47■□□□□ 0.23
PTBP1-211ENST00000587094 DEFB132Q7Z7B7 95 aa16.47■□□□□ 0.23
PTBP1-211ENST00000587094 SSH2Q76I76 1423 aa16.46■□□□□ 0.23
PTBP1-211ENST00000587094 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
PTBP1-211ENST00000587094 BLMP54132 1417 aaPredicted RBP16.45■□□□□ 0.22
PTBP1-211ENST00000587094 MON2Q7Z3U7 1717 aa16.45■□□□□ 0.22
PTBP1-211ENST00000587094 ZBTB7CA1YPR0 619 aa16.45■□□□□ 0.22
PTBP1-211ENST00000587094 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
PTBP1-211ENST00000587094 COL18A1P39060 1754 aa16.45■□□□□ 0.22
PTBP1-211ENST00000587094 SPATA31A1Q5TZJ5 1347 aa16.45■□□□□ 0.22
PTBP1-211ENST00000587094 GCP02774 474 aa16.44■□□□□ 0.22
PTBP1-211ENST00000587094 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
PTBP1-211ENST00000587094 USP35Q9P2H5 1018 aa16.44■□□□□ 0.22
PTBP1-211ENST00000587094 TNS1Q9HBL0 1735 aaKnown RBP16.44■□□□□ 0.22
PTBP1-211ENST00000587094 SLIT3O75094 1523 aa16.44■□□□□ 0.22
PTBP1-211ENST00000587094 LARP1Q6PKG0 1096 aaKnown RBP16.43■□□□□ 0.22
PTBP1-211ENST00000587094 NLRP13Q86W25 1043 aa16.43■□□□□ 0.22
PTBP1-211ENST00000587094 RGPD1P0DJD0 1748 aa16.42■□□□□ 0.22
PTBP1-211ENST00000587094 CPDO75976 1380 aa16.42■□□□□ 0.22
PTBP1-211ENST00000587094 NLRP6P59044 892 aa16.42■□□□□ 0.22
PTBP1-211ENST00000587094 CCDC125Q86Z20 511 aa16.42■□□□□ 0.22
PTBP1-211ENST00000587094 SRCAPQ6ZRS2 3230 aa16.41■□□□□ 0.22
PTBP1-211ENST00000587094 TTC21BQ7Z4L5 1316 aa16.41■□□□□ 0.22
PTBP1-211ENST00000587094 CPSF1Q10570 1443 aaKnown RBP16.4■□□□□ 0.22
PTBP1-211ENST00000587094 EVA1CP58658 441 aa16.4■□□□□ 0.22
PTBP1-211ENST00000587094 ZRANB1Q9UGI0 708 aa16.4■□□□□ 0.22
PTBP1-211ENST00000587094 COL5A2P05997 1499 aaPredicted RBP16.4■□□□□ 0.22
PTBP1-211ENST00000587094 WNK3Q9BYP7 1800 aa16.4■□□□□ 0.22
PTBP1-211ENST00000587094 SOX12O15370 315 aa16.39■□□□□ 0.21
PTBP1-211ENST00000587094 CD163L1Q9NR16 1453 aa16.39■□□□□ 0.21
PTBP1-211ENST00000587094 BRD4O60885 1362 aaPredicted RBP16.38■□□□□ 0.21
PTBP1-211ENST00000587094 KTN1Q86UP2 1357 aaKnown RBP16.38■□□□□ 0.21
PTBP1-211ENST00000587094 PARP4Q9UKK3 1724 aaKnown RBP16.37■□□□□ 0.21
PTBP1-211ENST00000587094 SBNO2Q9Y2G9 1366 aa16.37■□□□□ 0.21
PTBP1-211ENST00000587094 LTN1O94822 1766 aa16.36■□□□□ 0.21
PTBP1-211ENST00000587094 NFAT5O94916 1531 aa16.36■□□□□ 0.21
PTBP1-211ENST00000587094 SF3B2Q13435 895 aaKnown RBP16.36■□□□□ 0.21
PTBP1-211ENST00000587094 AXIN2Q9Y2T1 843 aa16.36■□□□□ 0.21
PTBP1-211ENST00000587094 USP54Q70EL1 1684 aa16.35■□□□□ 0.21
PTBP1-211ENST00000587094 EN1Q05925 392 aaPredicted RBP16.35■□□□□ 0.21
PTBP1-211ENST00000587094 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.35■□□□□ 0.21
PTBP1-211ENST00000587094 SLC12A5Q9H2X9 1139 aa16.35■□□□□ 0.21
PTBP1-211ENST00000587094 LRRC37A3O60309 1634 aa16.34■□□□□ 0.21
PTBP1-211ENST00000587094 BARGINQ6ZT62 677 aa16.34■□□□□ 0.21
PTBP1-211ENST00000587094 TCP11L2Q8N4U5 519 aa16.34■□□□□ 0.21
PTBP1-211ENST00000587094 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
PTBP1-211ENST00000587094 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
PTBP1-211ENST00000587094 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
PTBP1-211ENST00000587094 SBF2Q86WG5 1849 aa16.33■□□□□ 0.21
PTBP1-211ENST00000587094 TRIM37O94972 964 aa16.33■□□□□ 0.2
PTBP1-211ENST00000587094 NME9Q86XW9 330 aa16.33■□□□□ 0.2
PTBP1-211ENST00000587094 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
PTBP1-211ENST00000587094 CRB1P82279 1406 aa16.32■□□□□ 0.2
PTBP1-211ENST00000587094 TTC21AQ8NDW8 1320 aa16.32■□□□□ 0.2
PTBP1-211ENST00000587094 TESK2Q96S53 571 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms