RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 BRD4O60885 1362 aaPredicted RBP18.76■□□□□ 0.59
SMARCA4-210ENST00000586892 USP47Q96K76 1375 aa18.76■□□□□ 0.59
SMARCA4-210ENST00000586892 FNBP4Q8N3X1 1017 aaPredicted RBP18.74■□□□□ 0.59
SMARCA4-210ENST00000586892 CABLES1Q8TDN4 633 aa18.73■□□□□ 0.59
SMARCA4-210ENST00000586892 PUS7Q96PZ0 661 aaKnown RBP18.73■□□□□ 0.59
SMARCA4-210ENST00000586892 TESK2Q96S53 571 aa18.73■□□□□ 0.59
SMARCA4-210ENST00000586892 CRYBG1Q9Y4K1 1723 aa18.73■□□□□ 0.59
SMARCA4-210ENST00000586892 USP6P35125 1406 aa18.73■□□□□ 0.59
SMARCA4-210ENST00000586892 SOCS7O14512 581 aa18.72■□□□□ 0.59
SMARCA4-210ENST00000586892 AKAP12Q02952 1782 aa18.72■□□□□ 0.59
SMARCA4-210ENST00000586892 ZNF692Q9BU19 519 aaPredicted RBP18.71■□□□□ 0.59
SMARCA4-210ENST00000586892 USP21Q9UK80 565 aa18.71■□□□□ 0.59
SMARCA4-210ENST00000586892 PLEKHG5O94827 1062 aa18.7■□□□□ 0.58
SMARCA4-210ENST00000586892 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-210ENST00000586892 CPSF1Q10570 1443 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-210ENST00000586892 RXRBP28702 533 aa18.69■□□□□ 0.58
SMARCA4-210ENST00000586892 ABTB2Q8N961 1025 aa18.69■□□□□ 0.58
SMARCA4-210ENST00000586892 QTRT2Q9H974 415 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-210ENST00000586892 PHRF1Q9P1Y6 1649 aaKnown RBP18.69■□□□□ 0.58
SMARCA4-210ENST00000586892 SLIT2O94813 1529 aa18.69■□□□□ 0.58
SMARCA4-210ENST00000586892 BCL9LQ86UU0 1499 aa18.68■□□□□ 0.58
SMARCA4-210ENST00000586892 NWD2Q9ULI1 1742 aa18.68■□□□□ 0.58
SMARCA4-210ENST00000586892 SSH2Q76I76 1423 aa18.67■□□□□ 0.58
SMARCA4-210ENST00000586892 PLCH1Q4KWH8 1693 aa18.67■□□□□ 0.58
SMARCA4-210ENST00000586892 MON2Q7Z3U7 1717 aa18.67■□□□□ 0.58
SMARCA4-210ENST00000586892 TRPC5Q9UL62 973 aaPredicted RBP18.67■□□□□ 0.58
SMARCA4-210ENST00000586892 NINLQ9Y2I6 1382 aa18.67■□□□□ 0.58
SMARCA4-210ENST00000586892 CDK12Q9NYV4 1490 aaPredicted RBP18.66■□□□□ 0.58
SMARCA4-210ENST00000586892 TMF1P82094 1093 aa18.66■□□□□ 0.58
SMARCA4-210ENST00000586892 NRKQ7Z2Y5 1582 aa18.66■□□□□ 0.58
SMARCA4-210ENST00000586892 KTN1Q86UP2 1357 aaKnown RBP18.66■□□□□ 0.58
SMARCA4-210ENST00000586892 ATRNO75882 1429 aa18.66■□□□□ 0.58
SMARCA4-210ENST00000586892 COL14A1Q05707 1796 aaKnown RBP18.65■□□□□ 0.58
SMARCA4-210ENST00000586892 RBM6P78332 1123 aaKnown RBP18.65■□□□□ 0.58
SMARCA4-210ENST00000586892 NUTM2GQ5VZR2 741 aa18.65■□□□□ 0.58
SMARCA4-210ENST00000586892 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
SMARCA4-210ENST00000586892 TMC1Q8TDI8 760 aa18.65■□□□□ 0.58
SMARCA4-210ENST00000586892 PIK3C2AO00443 1686 aa18.64■□□□□ 0.57
SMARCA4-210ENST00000586892 UNC5CLQ8IV45 518 aa18.64■□□□□ 0.57
SMARCA4-210ENST00000586892 USP19O94966 1318 aa18.64■□□□□ 0.57
SMARCA4-210ENST00000586892 CD163L1Q9NR16 1453 aa18.64■□□□□ 0.57
SMARCA4-210ENST00000586892 FAM83GA6ND36 823 aa18.63■□□□□ 0.57
SMARCA4-210ENST00000586892 CDCA8Q53HL2 280 aa18.63■□□□□ 0.57
SMARCA4-210ENST00000586892 SLC12A5Q9H2X9 1139 aa18.63■□□□□ 0.57
SMARCA4-210ENST00000586892 TTC21BQ7Z4L5 1316 aa18.63■□□□□ 0.57
SMARCA4-210ENST00000586892 TTC21AQ8NDW8 1320 aa18.63■□□□□ 0.57
SMARCA4-210ENST00000586892 HDGFL2Q7Z4V5 671 aaPredicted RBP18.62■□□□□ 0.57
SMARCA4-210ENST00000586892 TERF2IPQ9NYB0 399 aa18.62■□□□□ 0.57
SMARCA4-210ENST00000586892 NLRP6P59044 892 aa18.61■□□□□ 0.57
SMARCA4-210ENST00000586892 PRDM11Q9NQV5 511 aa18.61■□□□□ 0.57
SMARCA4-210ENST00000586892 KIAA0232Q92628 1395 aa18.6■□□□□ 0.57
SMARCA4-210ENST00000586892 NRAPQ86VF7 1730 aa18.6■□□□□ 0.57
SMARCA4-210ENST00000586892 SLIT3O75094 1523 aa18.59■□□□□ 0.57
SMARCA4-210ENST00000586892 EDC4Q6P2E9 1401 aaKnown RBP18.59■□□□□ 0.57
SMARCA4-210ENST00000586892 A0A1W2PP64 1363 aa18.59■□□□□ 0.57
SMARCA4-210ENST00000586892 EIF4G2P78344 907 aaKnown RBP eCLIP18.59■□□□□ 0.57
SMARCA4-210ENST00000586892 CPDO75976 1380 aa18.58■□□□□ 0.57
SMARCA4-210ENST00000586892 GCP02774 474 aa18.58■□□□□ 0.56
SMARCA4-210ENST00000586892 GJD4Q96KN9 370 aaPredicted RBP18.58■□□□□ 0.56
SMARCA4-210ENST00000586892 BTG4Q9NY30 223 aa18.58■□□□□ 0.56
SMARCA4-210ENST00000586892 RGS12O14924 1447 aa18.57■□□□□ 0.56
SMARCA4-210ENST00000586892 ZC3H6P61129 1189 aaKnown RBP18.57■□□□□ 0.56
SMARCA4-210ENST00000586892 VPS72Q15906 364 aa18.57■□□□□ 0.56
SMARCA4-210ENST00000586892 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
SMARCA4-210ENST00000586892 ANKRD36BQ8N2N9 1353 aa18.55■□□□□ 0.56
SMARCA4-210ENST00000586892 GLI3P10071 1580 aa18.55■□□□□ 0.56
SMARCA4-210ENST00000586892 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.55■□□□□ 0.56
SMARCA4-210ENST00000586892 HSPA5P11021 654 aaKnown RBP18.54■□□□□ 0.56
SMARCA4-210ENST00000586892 CHRNA2Q15822 529 aa18.54■□□□□ 0.56
SMARCA4-210ENST00000586892 KCNH5Q8NCM2 988 aa18.54■□□□□ 0.56
SMARCA4-210ENST00000586892 USP31Q70CQ4 1352 aa18.54■□□□□ 0.56
SMARCA4-210ENST00000586892 LMO7Q8WWI1 1683 aa18.54■□□□□ 0.56
SMARCA4-210ENST00000586892 MYOM1P52179 1685 aa18.53■□□□□ 0.56
SMARCA4-210ENST00000586892 CCDC9Q9Y3X0 531 aaKnown RBP18.52■□□□□ 0.56
SMARCA4-210ENST00000586892 NME9Q86XW9 330 aa18.51■□□□□ 0.55
SMARCA4-210ENST00000586892 AATKQ6ZMQ8 1374 aa18.5■□□□□ 0.55
SMARCA4-210ENST00000586892 CAMTA1Q9Y6Y1 1673 aa18.5■□□□□ 0.55
SMARCA4-210ENST00000586892 NFAT5O94916 1531 aa18.49■□□□□ 0.55
SMARCA4-210ENST00000586892 EP400Q96L91 3159 aa18.49■□□□□ 0.55
SMARCA4-210ENST00000586892 OVOS2A0A0J9YW53 1432 aa18.49■□□□□ 0.55
SMARCA4-210ENST00000586892 OVOS2Q6IE36 1432 aa18.49■□□□□ 0.55
SMARCA4-210ENST00000586892 ZRANB1Q9UGI0 708 aa18.48■□□□□ 0.55
SMARCA4-210ENST00000586892 SPATA31A5Q5VU36 1347 aa18.48■□□□□ 0.55
SMARCA4-210ENST00000586892 SPATA31A7Q8IWB4 1347 aa18.48■□□□□ 0.55
SMARCA4-210ENST00000586892 COL18A1P39060 1754 aa18.47■□□□□ 0.55
SMARCA4-210ENST00000586892 ONECUT3O60422 494 aaPredicted RBP18.47■□□□□ 0.55
SMARCA4-210ENST00000586892 EVA1CP58658 441 aa18.47■□□□□ 0.55
SMARCA4-210ENST00000586892 ARHGEF25Q86VW2 580 aa18.47■□□□□ 0.55
SMARCA4-210ENST00000586892 STRN4Q9NRL3 753 aa18.47■□□□□ 0.55
SMARCA4-210ENST00000586892 COL5A2P05997 1499 aaPredicted RBP18.46■□□□□ 0.55
SMARCA4-210ENST00000586892 ABCC6O95255 1503 aa18.46■□□□□ 0.55
SMARCA4-210ENST00000586892 ZBTB7CA1YPR0 619 aa18.46■□□□□ 0.55
SMARCA4-210ENST00000586892 SOX12O15370 315 aa18.46■□□□□ 0.55
SMARCA4-210ENST00000586892 SPATA31A1Q5TZJ5 1347 aa18.45■□□□□ 0.54
SMARCA4-210ENST00000586892 LTN1O94822 1766 aa18.44■□□□□ 0.54
SMARCA4-210ENST00000586892 BRWD3Q6RI45 1802 aa18.44■□□□□ 0.54
SMARCA4-210ENST00000586892 FAM98CQ17RN3 349 aaKnown RBP18.43■□□□□ 0.54
SMARCA4-210ENST00000586892 SEPT12Q8IYM1 358 aa18.43■□□□□ 0.54
SMARCA4-210ENST00000586892 COG3Q96JB2 828 aa18.43■□□□□ 0.54
SMARCA4-210ENST00000586892 POLR3GLQ9BT43 218 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms