RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.49□□□□□ -0.57
NPC1-204ENST00000586718 PMFBP1Q8TBY8 1022 aa11.49□□□□□ -0.57
NPC1-204ENST00000586718 YTHDC1Q96MU7 727 aaKnown RBP11.49□□□□□ -0.57
NPC1-204ENST00000586718 PPP2R1AP30153 589 aa11.48□□□□□ -0.57
NPC1-204ENST00000586718 ESCO1Q5FWF5 840 aa11.48□□□□□ -0.57
NPC1-204ENST00000586718 GGNBP2Q9H3C7 697 aa11.48□□□□□ -0.57
NPC1-204ENST00000586718 TTC21BQ7Z4L5 1316 aa11.48□□□□□ -0.57
NPC1-204ENST00000586718 OVOS2A0A0J9YW53 1432 aa11.48□□□□□ -0.57
NPC1-204ENST00000586718 OVOS2Q6IE36 1432 aa11.48□□□□□ -0.57
NPC1-204ENST00000586718 TRPM3Q9HCF6 1732 aaPredicted RBP11.47□□□□□ -0.57
NPC1-204ENST00000586718 COG3Q96JB2 828 aa11.47□□□□□ -0.57
NPC1-204ENST00000586718 LTBP4Q8N2S1 1624 aa11.46□□□□□ -0.57
NPC1-204ENST00000586718 SSH2Q76I76 1423 aa11.46□□□□□ -0.57
NPC1-204ENST00000586718 SCAF1Q9H7N4 1312 aaKnown RBP11.46□□□□□ -0.57
NPC1-204ENST00000586718 FYB1O15117 783 aa11.46□□□□□ -0.57
NPC1-204ENST00000586718 CFAP53Q96M91 514 aa11.46□□□□□ -0.57
NPC1-204ENST00000586718 CENPBP07199 599 aaPredicted RBP11.45□□□□□ -0.58
NPC1-204ENST00000586718 NME9Q86XW9 330 aa11.45□□□□□ -0.58
NPC1-204ENST00000586718 CDK12Q9NYV4 1490 aaPredicted RBP11.44□□□□□ -0.58
NPC1-204ENST00000586718 SMG6Q86US8 1419 aaKnown RBP11.44□□□□□ -0.58
NPC1-204ENST00000586718 MARF1Q9Y4F3 1742 aaKnown RBP11.44□□□□□ -0.58
NPC1-204ENST00000586718 SHPRHQ149N8 1683 aa11.44□□□□□ -0.58
NPC1-204ENST00000586718 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
NPC1-204ENST00000586718 WDR43Q15061 677 aaKnown RBP eCLIP11.44□□□□□ -0.58
NPC1-204ENST00000586718 FAM9BQ8IZU0 186 aa11.44□□□□□ -0.58
NPC1-204ENST00000586718 NHSL1Q5SYE7 1610 aa11.44□□□□□ -0.58
NPC1-204ENST00000586718 MAP2P11137 1827 aaKnown RBP11.44□□□□□ -0.58
NPC1-204ENST00000586718 AATKQ6ZMQ8 1374 aa11.43□□□□□ -0.58
NPC1-204ENST00000586718 USP31Q70CQ4 1352 aa11.43□□□□□ -0.58
NPC1-204ENST00000586718 ALS2Q96Q42 1657 aa11.43□□□□□ -0.58
NPC1-204ENST00000586718 NPHP3Q7Z494 1330 aa11.43□□□□□ -0.58
NPC1-204ENST00000586718 PSME1Q06323 249 aa11.43□□□□□ -0.58
NPC1-204ENST00000586718 CCDC184Q52MB2 194 aa11.43□□□□□ -0.58
NPC1-204ENST00000586718 INSRP06213 1382 aa11.42□□□□□ -0.58
NPC1-204ENST00000586718 PAK3O75914 559 aaPredicted RBP11.42□□□□□ -0.58
NPC1-204ENST00000586718 ORAI2Q96SN7 254 aa11.42□□□□□ -0.58
NPC1-204ENST00000586718 PHRF1Q9P1Y6 1649 aaKnown RBP11.41□□□□□ -0.58
NPC1-204ENST00000586718 BLMP54132 1417 aaPredicted RBP11.41□□□□□ -0.58
NPC1-204ENST00000586718 LTN1O94822 1766 aa11.41□□□□□ -0.58
NPC1-204ENST00000586718 COL3A1P02461 1466 aaPredicted RBP11.4□□□□□ -0.58
NPC1-204ENST00000586718 IQSEC2Q5JU85 1478 aa11.4□□□□□ -0.58
NPC1-204ENST00000586718 PNISRQ8TF01 805 aaKnown RBP11.4□□□□□ -0.58
NPC1-204ENST00000586718 TNS3Q68CZ2 1445 aa11.4□□□□□ -0.58
NPC1-204ENST00000586718 MED1Q15648 1581 aaPredicted RBP11.4□□□□□ -0.58
NPC1-204ENST00000586718 SBNO1A3KN83 1393 aa11.4□□□□□ -0.59
NPC1-204ENST00000586718 SLIT3O75094 1523 aa11.4□□□□□ -0.59
NPC1-204ENST00000586718 ROBO1Q9Y6N7 1651 aa11.4□□□□□ -0.59
NPC1-204ENST00000586718 PXDNQ92626 1479 aa11.39□□□□□ -0.59
NPC1-204ENST00000586718 FOXO3O43524 673 aa11.39□□□□□ -0.59
NPC1-204ENST00000586718 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
NPC1-204ENST00000586718 ABTB2Q8N961 1025 aa11.39□□□□□ -0.59
NPC1-204ENST00000586718 MTHFSP49914 203 aa11.38□□□□□ -0.59
NPC1-204ENST00000586718 NLRP6P59044 892 aa11.38□□□□□ -0.59
NPC1-204ENST00000586718 KRT28Q7Z3Y7 464 aa11.38□□□□□ -0.59
NPC1-204ENST00000586718 SLAIN2Q9P270 581 aa11.38□□□□□ -0.59
NPC1-204ENST00000586718 NUDCQ9Y266 331 aa11.38□□□□□ -0.59
NPC1-204ENST00000586718 NFAT5O94916 1531 aa11.38□□□□□ -0.59
NPC1-204ENST00000586718 RTL1A6NKG5 1358 aa11.38□□□□□ -0.59
NPC1-204ENST00000586718 ARHGEF10O15013 1369 aa11.38□□□□□ -0.59
NPC1-204ENST00000586718 AHDC1Q5TGY3 1603 aaPredicted RBP11.38□□□□□ -0.59
NPC1-204ENST00000586718 BRINP3Q76B58 766 aa11.37□□□□□ -0.59
NPC1-204ENST00000586718 ZRANB1Q9UGI0 708 aa11.37□□□□□ -0.59
NPC1-204ENST00000586718 KIF24Q5T7B8 1368 aa11.37□□□□□ -0.59
NPC1-204ENST00000586718 PEAK1Q9H792 1746 aa11.37□□□□□ -0.59
NPC1-204ENST00000586718 ABCA3Q99758 1704 aa11.36□□□□□ -0.59
NPC1-204ENST00000586718 CRYBG1Q9Y4K1 1723 aa11.36□□□□□ -0.59
NPC1-204ENST00000586718 XPCQ01831 940 aaPredicted RBP11.36□□□□□ -0.59
NPC1-204ENST00000586718 LMOD2Q6P5Q4 547 aa11.36□□□□□ -0.59
NPC1-204ENST00000586718 KCNH5Q8NCM2 988 aa11.36□□□□□ -0.59
NPC1-204ENST00000586718 FLT4P35916 1363 aa11.36□□□□□ -0.59
NPC1-204ENST00000586718 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
NPC1-204ENST00000586718 SOX12O15370 315 aa11.35□□□□□ -0.59
NPC1-204ENST00000586718 POLKQ9UBT6 870 aa11.35□□□□□ -0.59
NPC1-204ENST00000586718 PNPLA6Q8IY17 1366 aa11.35□□□□□ -0.59
NPC1-204ENST00000586718 ABCC6O95255 1503 aa11.35□□□□□ -0.59
NPC1-204ENST00000586718 DIAPH1O60610 1272 aaKnown RBP11.34□□□□□ -0.59
NPC1-204ENST00000586718 NUTM2GQ5VZR2 741 aa11.34□□□□□ -0.59
NPC1-204ENST00000586718 EMILIN1Q9Y6C2 1016 aa11.34□□□□□ -0.59
NPC1-204ENST00000586718 USP19O94966 1318 aa11.34□□□□□ -0.59
NPC1-204ENST00000586718 ZBED9Q6R2W3 1325 aa11.34□□□□□ -0.59
NPC1-204ENST00000586718 PHLPP1O60346 1717 aa11.33□□□□□ -0.6
NPC1-204ENST00000586718 RRS1Q15050 365 aaKnown RBP11.33□□□□□ -0.6
NPC1-204ENST00000586718 SPATA31A3Q5VYP0 1347 aa11.33□□□□□ -0.6
NPC1-204ENST00000586718 U2SURPO15042 1029 aaKnown RBP11.32□□□□□ -0.6
NPC1-204ENST00000586718 AMPHP49418 695 aa11.32□□□□□ -0.6
NPC1-204ENST00000586718 PNNQ9H307 717 aaKnown RBP11.32□□□□□ -0.6
NPC1-204ENST00000586718 FAM208AQ9UK61 1670 aaKnown RBP11.32□□□□□ -0.6
NPC1-204ENST00000586718 SOS2Q07890 1332 aaPredicted RBP11.32□□□□□ -0.6
NPC1-204ENST00000586718 MAP3K19Q56UN5 1328 aa11.32□□□□□ -0.6
NPC1-204ENST00000586718 RGPD1P0DJD0 1748 aa11.32□□□□□ -0.6
NPC1-204ENST00000586718 TOM1O60784 492 aa11.31□□□□□ -0.6
NPC1-204ENST00000586718 NEFMP07197 916 aa11.31□□□□□ -0.6
NPC1-204ENST00000586718 U2AF1L5P0DN76 240 aaPredicted RBP11.31□□□□□ -0.6
NPC1-204ENST00000586718 U2AF1Q01081 240 aaKnown RBP eCLIP11.31□□□□□ -0.6
NPC1-204ENST00000586718 ADAMTS8Q9UP79 889 aa11.31□□□□□ -0.6
NPC1-204ENST00000586718 MAPK8IP3Q9UPT6 1336 aa11.31□□□□□ -0.6
NPC1-204ENST00000586718 COL22A1Q8NFW1 1626 aaPredicted RBP11.3□□□□□ -0.6
NPC1-204ENST00000586718 COL16A1Q07092 1604 aaPredicted RBP11.29□□□□□ -0.6
NPC1-204ENST00000586718 DDX17Q92841 729 aaKnown RBP11.29□□□□□ -0.6
NPC1-204ENST00000586718 ZBTB7CA1YPR0 619 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms