RNA–Protein interactions for RNA: ENST00000586287.1

TREM1-203, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

TSL 2

Gene TREM1, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-203ENST00000586287 FYB1O15117 783 aa11.27□□□□□ -0.61
TREM1-203ENST00000586287 KRT28Q7Z3Y7 464 aa11.27□□□□□ -0.61
TREM1-203ENST00000586287 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
TREM1-203ENST00000586287 UBAP1LF5GYI3 381 aa11.26□□□□□ -0.61
TREM1-203ENST00000586287 XPCQ01831 940 aaPredicted RBP11.26□□□□□ -0.61
TREM1-203ENST00000586287 PSME1Q06323 249 aa11.26□□□□□ -0.61
TREM1-203ENST00000586287 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.26□□□□□ -0.61
TREM1-203ENST00000586287 SOS2Q07890 1332 aaPredicted RBP11.26□□□□□ -0.61
TREM1-203ENST00000586287 NPHP3Q7Z494 1330 aa11.26□□□□□ -0.61
TREM1-203ENST00000586287 PXDNQ92626 1479 aa11.25□□□□□ -0.61
TREM1-203ENST00000586287 NRKQ7Z2Y5 1582 aa11.25□□□□□ -0.61
TREM1-203ENST00000586287 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
TREM1-203ENST00000586287 CGNL1Q0VF96 1302 aa11.25□□□□□ -0.61
TREM1-203ENST00000586287 BRD4O60885 1362 aaPredicted RBP11.25□□□□□ -0.61
TREM1-203ENST00000586287 ROBO1Q9Y6N7 1651 aa11.24□□□□□ -0.61
TREM1-203ENST00000586287 CC2D1BQ5T0F9 858 aaKnown RBP11.24□□□□□ -0.61
TREM1-203ENST00000586287 NME9Q86XW9 330 aa11.24□□□□□ -0.61
TREM1-203ENST00000586287 TTC21AQ8NDW8 1320 aa11.24□□□□□ -0.61
TREM1-203ENST00000586287 PIP4K2BP78356 416 aa11.23□□□□□ -0.61
TREM1-203ENST00000586287 GGNBP2Q9H3C7 697 aa11.23□□□□□ -0.61
TREM1-203ENST00000586287 PRKRIP1Q9H875 184 aaPredicted RBP11.23□□□□□ -0.61
TREM1-203ENST00000586287 SBNO1A3KN83 1393 aa11.23□□□□□ -0.61
TREM1-203ENST00000586287 NHSL1Q5SYE7 1610 aa11.23□□□□□ -0.61
TREM1-203ENST00000586287 TRPM3Q9HCF6 1732 aaPredicted RBP11.23□□□□□ -0.61
TREM1-203ENST00000586287 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
TREM1-203ENST00000586287 CNGB1Q14028 1251 aaPredicted RBP11.22□□□□□ -0.61
TREM1-203ENST00000586287 SPATA31A3Q5VYP0 1347 aa11.22□□□□□ -0.61
TREM1-203ENST00000586287 USP31Q70CQ4 1352 aa11.22□□□□□ -0.61
TREM1-203ENST00000586287 PARD3Q8TEW0 1356 aa11.22□□□□□ -0.61
TREM1-203ENST00000586287 AHDC1Q5TGY3 1603 aaPredicted RBP11.21□□□□□ -0.61
TREM1-203ENST00000586287 NSD2O96028 1365 aa11.21□□□□□ -0.61
TREM1-203ENST00000586287 ABTB2Q8N961 1025 aa11.21□□□□□ -0.61
TREM1-203ENST00000586287 PIK3C2AO00443 1686 aa11.2□□□□□ -0.62
TREM1-203ENST00000586287 OVOS2A0A0J9YW53 1432 aa11.2□□□□□ -0.62
TREM1-203ENST00000586287 OVOS2Q6IE36 1432 aa11.2□□□□□ -0.62
TREM1-203ENST00000586287 ANP32CO43423 234 aa11.2□□□□□ -0.62
TREM1-203ENST00000586287 NUTM2GQ5VZR2 741 aa11.2□□□□□ -0.62
TREM1-203ENST00000586287 TNS3Q68CZ2 1445 aa11.19□□□□□ -0.62
TREM1-203ENST00000586287 SCAF1Q9H7N4 1312 aaKnown RBP11.19□□□□□ -0.62
TREM1-203ENST00000586287 NLRP6P59044 892 aa11.19□□□□□ -0.62
TREM1-203ENST00000586287 RALBP1Q15311 655 aa11.19□□□□□ -0.62
TREM1-203ENST00000586287 MIER1Q8N108 512 aa11.19□□□□□ -0.62
TREM1-203ENST00000586287 ALS2Q96Q42 1657 aa11.19□□□□□ -0.62
TREM1-203ENST00000586287 FBLN1P23142 703 aa11.18□□□□□ -0.62
TREM1-203ENST00000586287 MORC1Q86VD1 984 aa11.18□□□□□ -0.62
TREM1-203ENST00000586287 COG3Q96JB2 828 aa11.18□□□□□ -0.62
TREM1-203ENST00000586287 KIF20BQ96Q89 1820 aa11.18□□□□□ -0.62
TREM1-203ENST00000586287 MARF1Q9Y4F3 1742 aaKnown RBP11.18□□□□□ -0.62
TREM1-203ENST00000586287 COL16A1Q07092 1604 aaPredicted RBP11.17□□□□□ -0.62
TREM1-203ENST00000586287 USP19O94966 1318 aa11.17□□□□□ -0.62
TREM1-203ENST00000586287 LMOD2Q6P5Q4 547 aa11.17□□□□□ -0.62
TREM1-203ENST00000586287 NLRP13Q86W25 1043 aa11.17□□□□□ -0.62
TREM1-203ENST00000586287 LRRC59Q96AG4 307 aaKnown RBP11.17□□□□□ -0.62
TREM1-203ENST00000586287 USP54Q70EL1 1684 aa11.17□□□□□ -0.62
TREM1-203ENST00000586287 ANKRD26Q9UPS8 1709 aa11.16□□□□□ -0.62
TREM1-203ENST00000586287 PPP2R1AP30153 589 aa11.16□□□□□ -0.62
TREM1-203ENST00000586287 MED1Q15648 1581 aaPredicted RBP11.16□□□□□ -0.62
TREM1-203ENST00000586287 ARHGEF10O15013 1369 aa11.16□□□□□ -0.62
TREM1-203ENST00000586287 GCP02774 474 aa11.15□□□□□ -0.62
TREM1-203ENST00000586287 TNNT2P45379 298 aaPredicted RBP11.15□□□□□ -0.62
TREM1-203ENST00000586287 CCDC184Q52MB2 194 aa11.15□□□□□ -0.62
TREM1-203ENST00000586287 PHLPP1O60346 1717 aa11.15□□□□□ -0.63
TREM1-203ENST00000586287 AATKQ6ZMQ8 1374 aa11.15□□□□□ -0.63
TREM1-203ENST00000586287 SLIT3O75094 1523 aa11.14□□□□□ -0.63
TREM1-203ENST00000586287 MYBBP1AQ9BQG0 1328 aaKnown RBP11.14□□□□□ -0.63
TREM1-203ENST00000586287 HSPA1LP34931 641 aa11.14□□□□□ -0.63
TREM1-203ENST00000586287 CABLES1Q8TDN4 633 aa11.14□□□□□ -0.63
TREM1-203ENST00000586287 POLKQ9UBT6 870 aa11.14□□□□□ -0.63
TREM1-203ENST00000586287 PNPLA6Q8IY17 1366 aa11.14□□□□□ -0.63
TREM1-203ENST00000586287 MTHFSP49914 203 aa11.13□□□□□ -0.63
TREM1-203ENST00000586287 RRS1Q15050 365 aaKnown RBP11.13□□□□□ -0.63
TREM1-203ENST00000586287 EMILIN1Q9Y6C2 1016 aa11.13□□□□□ -0.63
TREM1-203ENST00000586287 NFAT5O94916 1531 aa11.13□□□□□ -0.63
TREM1-203ENST00000586287 CRYBG1Q9Y4K1 1723 aa11.12□□□□□ -0.63
TREM1-203ENST00000586287 SOX12O15370 315 aa11.12□□□□□ -0.63
TREM1-203ENST00000586287 PLEKHG5O94827 1062 aa11.12□□□□□ -0.63
TREM1-203ENST00000586287 KCNH5Q8NCM2 988 aa11.12□□□□□ -0.63
TREM1-203ENST00000586287 MAP3K19Q56UN5 1328 aa11.11□□□□□ -0.63
TREM1-203ENST00000586287 SMG6Q86US8 1419 aaKnown RBP11.11□□□□□ -0.63
TREM1-203ENST00000586287 CCER2I3L3R5 266 aa11.11□□□□□ -0.63
TREM1-203ENST00000586287 ARHGEF25Q86VW2 580 aa11.11□□□□□ -0.63
TREM1-203ENST00000586287 COL22A1Q8NFW1 1626 aaPredicted RBP11.1□□□□□ -0.63
TREM1-203ENST00000586287 INSRP06213 1382 aa11.1□□□□□ -0.63
TREM1-203ENST00000586287 PHRF1Q9P1Y6 1649 aaKnown RBP11.09□□□□□ -0.63
TREM1-203ENST00000586287 JCADQ9P266 1359 aa11.09□□□□□ -0.63
TREM1-203ENST00000586287 ZC3H6P61129 1189 aaKnown RBP11.09□□□□□ -0.63
TREM1-203ENST00000586287 CPDO75976 1380 aa11.08□□□□□ -0.64
TREM1-203ENST00000586287 MAP2P11137 1827 aaKnown RBP11.08□□□□□ -0.64
TREM1-203ENST00000586287 PEAK1Q9H792 1746 aa11.08□□□□□ -0.64
TREM1-203ENST00000586287 COL3A1P02461 1466 aaPredicted RBP11.07□□□□□ -0.64
TREM1-203ENST00000586287 ABCA3Q99758 1704 aa11.07□□□□□ -0.64
TREM1-203ENST00000586287 KIF24Q5T7B8 1368 aa11.07□□□□□ -0.64
TREM1-203ENST00000586287 PPM1GO15355 546 aaPredicted RBP11.07□□□□□ -0.64
TREM1-203ENST00000586287 HOXC9P31274 260 aa11.07□□□□□ -0.64
TREM1-203ENST00000586287 HSP90AB2PQ58FF8 381 aa11.07□□□□□ -0.64
TREM1-203ENST00000586287 IP6K1Q92551 441 aa11.07□□□□□ -0.64
TREM1-203ENST00000586287 MRS2Q9HD23 443 aa11.07□□□□□ -0.64
TREM1-203ENST00000586287 AXIN2Q9Y2T1 843 aa11.07□□□□□ -0.64
TREM1-203ENST00000586287 SHPRHQ149N8 1683 aa11.07□□□□□ -0.64
TREM1-203ENST00000586287 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms