RNA–Protein interactions for RNA: ENST00000586059.5

CNN1-204, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-204ENST00000586059 USP6P35125 1406 aa16.87■□□□□ 0.29
CNN1-204ENST00000586059 MEX3CQ5U5Q3 659 aaKnown RBP16.86■□□□□ 0.29
CNN1-204ENST00000586059 PUS7Q96PZ0 661 aaKnown RBP16.86■□□□□ 0.29
CNN1-204ENST00000586059 PHRF1Q9P1Y6 1649 aaKnown RBP16.85■□□□□ 0.29
CNN1-204ENST00000586059 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
CNN1-204ENST00000586059 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
CNN1-204ENST00000586059 CDCA8Q53HL2 280 aa16.84■□□□□ 0.29
CNN1-204ENST00000586059 NINLQ9Y2I6 1382 aa16.84■□□□□ 0.29
CNN1-204ENST00000586059 CPSF1Q10570 1443 aaKnown RBP16.84■□□□□ 0.29
CNN1-204ENST00000586059 CD163L1Q9NR16 1453 aa16.84■□□□□ 0.29
CNN1-204ENST00000586059 PIK3C2AO00443 1686 aa16.84■□□□□ 0.29
CNN1-204ENST00000586059 BRD4O60885 1362 aaPredicted RBP16.83■□□□□ 0.28
CNN1-204ENST00000586059 KTN1Q86UP2 1357 aaKnown RBP16.83■□□□□ 0.28
CNN1-204ENST00000586059 SLC12A5Q9H2X9 1139 aa16.83■□□□□ 0.28
CNN1-204ENST00000586059 ADAMTS2O95450 1211 aa16.82■□□□□ 0.28
CNN1-204ENST00000586059 A0A1W2PP64 1363 aa16.81■□□□□ 0.28
CNN1-204ENST00000586059 HAP1P54257 671 aaPredicted RBP16.81■□□□□ 0.28
CNN1-204ENST00000586059 HDGFL2Q7Z4V5 671 aaPredicted RBP16.81■□□□□ 0.28
CNN1-204ENST00000586059 SSH2Q76I76 1423 aa16.8■□□□□ 0.28
CNN1-204ENST00000586059 NUTM2GQ5VZR2 741 aa16.8■□□□□ 0.28
CNN1-204ENST00000586059 CABLES1Q8TDN4 633 aa16.8■□□□□ 0.28
CNN1-204ENST00000586059 POLR3GLQ9BT43 218 aa16.8■□□□□ 0.28
CNN1-204ENST00000586059 ZNF692Q9BU19 519 aaPredicted RBP16.8■□□□□ 0.28
CNN1-204ENST00000586059 TERF2IPQ9NYB0 399 aa16.8■□□□□ 0.28
CNN1-204ENST00000586059 ABTB2Q8N961 1025 aa16.79■□□□□ 0.28
CNN1-204ENST00000586059 PLCH1Q4KWH8 1693 aa16.78■□□□□ 0.28
CNN1-204ENST00000586059 TTC21BQ7Z4L5 1316 aa16.78■□□□□ 0.28
CNN1-204ENST00000586059 C8orf37Q96NL8 207 aa16.78■□□□□ 0.28
CNN1-204ENST00000586059 EDC4Q6P2E9 1401 aaKnown RBP16.78■□□□□ 0.28
CNN1-204ENST00000586059 ANKRD36BQ8N2N9 1353 aa16.77■□□□□ 0.28
CNN1-204ENST00000586059 KIF20BQ96Q89 1820 aa16.77■□□□□ 0.27
CNN1-204ENST00000586059 TTC21AQ8NDW8 1320 aa16.76■□□□□ 0.27
CNN1-204ENST00000586059 USP54Q70EL1 1684 aa16.76■□□□□ 0.27
CNN1-204ENST00000586059 AFF2P51816 1311 aa16.75■□□□□ 0.27
CNN1-204ENST00000586059 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.75■□□□□ 0.27
CNN1-204ENST00000586059 COL14A1Q05707 1796 aaKnown RBP16.74■□□□□ 0.27
CNN1-204ENST00000586059 NWD2Q9ULI1 1742 aa16.74■□□□□ 0.27
CNN1-204ENST00000586059 NLRP13Q86W25 1043 aa16.74■□□□□ 0.27
CNN1-204ENST00000586059 NGLY1Q96IV0 654 aa16.74■□□□□ 0.27
CNN1-204ENST00000586059 SLIT3O75094 1523 aa16.74■□□□□ 0.27
CNN1-204ENST00000586059 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.73■□□□□ 0.27
CNN1-204ENST00000586059 USP19O94966 1318 aa16.73■□□□□ 0.27
CNN1-204ENST00000586059 NLRP6P59044 892 aa16.73■□□□□ 0.27
CNN1-204ENST00000586059 RGS17Q9UGC6 210 aaPredicted RBP16.73■□□□□ 0.27
CNN1-204ENST00000586059 C11orf95C9JLR9 678 aaPredicted RBP16.72■□□□□ 0.27
CNN1-204ENST00000586059 NME9Q86XW9 330 aa16.71■□□□□ 0.27
CNN1-204ENST00000586059 NRAPQ86VF7 1730 aa16.7■□□□□ 0.26
CNN1-204ENST00000586059 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
CNN1-204ENST00000586059 SLIT2O94813 1529 aa16.7■□□□□ 0.26
CNN1-204ENST00000586059 NSD3Q9BZ95 1437 aa16.7■□□□□ 0.26
CNN1-204ENST00000586059 KIF7Q2M1P5 1343 aa16.7■□□□□ 0.26
CNN1-204ENST00000586059 KIAA0232Q92628 1395 aa16.69■□□□□ 0.26
CNN1-204ENST00000586059 ZEB1P37275 1124 aaPredicted RBP16.69■□□□□ 0.26
CNN1-204ENST00000586059 PRDM11Q9NQV5 511 aa16.69■□□□□ 0.26
CNN1-204ENST00000586059 ZRANB1Q9UGI0 708 aa16.69■□□□□ 0.26
CNN1-204ENST00000586059 LTN1O94822 1766 aa16.69■□□□□ 0.26
CNN1-204ENST00000586059 USP31Q70CQ4 1352 aa16.68■□□□□ 0.26
CNN1-204ENST00000586059 ZC3H6P61129 1189 aaKnown RBP16.68■□□□□ 0.26
CNN1-204ENST00000586059 POTEAQ6S8J7 498 aa16.68■□□□□ 0.26
CNN1-204ENST00000586059 USP21Q9UK80 565 aa16.68■□□□□ 0.26
CNN1-204ENST00000586059 NFAT5O94916 1531 aa16.68■□□□□ 0.26
CNN1-204ENST00000586059 OVOS2A0A0J9YW53 1432 aa16.68■□□□□ 0.26
CNN1-204ENST00000586059 OVOS2Q6IE36 1432 aa16.68■□□□□ 0.26
CNN1-204ENST00000586059 GCP02774 474 aa16.67■□□□□ 0.26
CNN1-204ENST00000586059 FNBP4Q8N3X1 1017 aaPredicted RBP16.67■□□□□ 0.26
CNN1-204ENST00000586059 ANKRD26Q9UPS8 1709 aa16.67■□□□□ 0.26
CNN1-204ENST00000586059 BCL9LQ86UU0 1499 aa16.67■□□□□ 0.26
CNN1-204ENST00000586059 RGPD5Q99666 1765 aa16.66■□□□□ 0.26
CNN1-204ENST00000586059 CCDC7Q96M83 1385 aa16.66■□□□□ 0.26
CNN1-204ENST00000586059 LMO7Q8WWI1 1683 aa16.66■□□□□ 0.26
CNN1-204ENST00000586059 FAM83GA6ND36 823 aa16.66■□□□□ 0.26
CNN1-204ENST00000586059 SOX12O15370 315 aa16.66■□□□□ 0.26
CNN1-204ENST00000586059 CPDO75976 1380 aa16.65■□□□□ 0.26
CNN1-204ENST00000586059 ZBTB7CA1YPR0 619 aa16.65■□□□□ 0.26
CNN1-204ENST00000586059 CHRNA2Q15822 529 aa16.65■□□□□ 0.26
CNN1-204ENST00000586059 COL18A1P39060 1754 aa16.64■□□□□ 0.25
CNN1-204ENST00000586059 ATRNO75882 1429 aa16.64■□□□□ 0.25
CNN1-204ENST00000586059 CARD14Q9BXL6 1004 aa16.64■□□□□ 0.25
CNN1-204ENST00000586059 UNC5CLQ8IV45 518 aa16.63■□□□□ 0.25
CNN1-204ENST00000586059 KCNH5Q8NCM2 988 aa16.63■□□□□ 0.25
CNN1-204ENST00000586059 COG3Q96JB2 828 aa16.63■□□□□ 0.25
CNN1-204ENST00000586059 QTRT2Q9H974 415 aaKnown RBP16.63■□□□□ 0.25
CNN1-204ENST00000586059 PANK3Q9H999 370 aa16.63■□□□□ 0.25
CNN1-204ENST00000586059 BTG4Q9NY30 223 aa16.63■□□□□ 0.25
CNN1-204ENST00000586059 WASHC2AQ641Q2 1341 aa16.63■□□□□ 0.25
CNN1-204ENST00000586059 ILDR2Q71H61 639 aa16.62■□□□□ 0.25
CNN1-204ENST00000586059 GGNBP2Q9H3C7 697 aa16.62■□□□□ 0.25
CNN1-204ENST00000586059 TRPC5Q9UL62 973 aaPredicted RBP16.62■□□□□ 0.25
CNN1-204ENST00000586059 FYB1O15117 783 aa16.61■□□□□ 0.25
CNN1-204ENST00000586059 CAMTA1Q9Y6Y1 1673 aa16.61■□□□□ 0.25
CNN1-204ENST00000586059 CGNL1Q0VF96 1302 aa16.61■□□□□ 0.25
CNN1-204ENST00000586059 GLI3P10071 1580 aa16.6■□□□□ 0.25
CNN1-204ENST00000586059 ABCC6O95255 1503 aa16.6■□□□□ 0.25
CNN1-204ENST00000586059 AATKQ6ZMQ8 1374 aa16.59■□□□□ 0.25
CNN1-204ENST00000586059 RXRBP28702 533 aa16.58■□□□□ 0.24
CNN1-204ENST00000586059 RBM6P78332 1123 aaKnown RBP16.58■□□□□ 0.24
CNN1-204ENST00000586059 ARHGEF25Q86VW2 580 aa16.58■□□□□ 0.24
CNN1-204ENST00000586059 CCDC9Q9Y3X0 531 aaKnown RBP16.58■□□□□ 0.24
CNN1-204ENST00000586059 MAP2P11137 1827 aaKnown RBP16.57■□□□□ 0.24
CNN1-204ENST00000586059 COL5A2P05997 1499 aaPredicted RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms