RNA–Protein interactions for RNA: ENST00000585974.1

ZNF560-202, Transcript of zinc finger protein 560, humanhuman

TSL 3

Gene ZNF560, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-202ENST00000585974 PLEKHG3A1L390 1219 aa9.33□□□□□ -0.92
ZNF560-202ENST00000585974 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.33□□□□□ -0.92
ZNF560-202ENST00000585974 SMCPP49901 116 aaPredicted RBP9.32□□□□□ -0.92
ZNF560-202ENST00000585974 SH3BP2P78314 561 aa9.32□□□□□ -0.92
ZNF560-202ENST00000585974 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
ZNF560-202ENST00000585974 RTL5Q5HYW3 569 aaPredicted RBP9.32□□□□□ -0.92
ZNF560-202ENST00000585974 MPNDQ8N594 471 aa9.32□□□□□ -0.92
ZNF560-202ENST00000585974 VARSP26640 1264 aaKnown RBP9.31□□□□□ -0.92
ZNF560-202ENST00000585974 ZNF511Q8NB15 262 aa9.31□□□□□ -0.92
ZNF560-202ENST00000585974 EHBP1Q8NDI1 1231 aa9.31□□□□□ -0.92
ZNF560-202ENST00000585974 BAP1Q92560 729 aa9.31□□□□□ -0.92
ZNF560-202ENST00000585974 TPRNQ4KMQ1 711 aa9.3□□□□□ -0.92
ZNF560-202ENST00000585974 SIAH2O43255 324 aa9.29□□□□□ -0.92
ZNF560-202ENST00000585974 SMPD1P17405 629 aa9.29□□□□□ -0.92
ZNF560-202ENST00000585974 TSC1Q92574 1164 aa9.29□□□□□ -0.92
ZNF560-202ENST00000585974 PER1O15534 1290 aaPredicted RBP9.28□□□□□ -0.92
ZNF560-202ENST00000585974 PROCA1Q8NCQ7 364 aaPredicted RBP9.28□□□□□ -0.92
ZNF560-202ENST00000585974 GPKOWQ92917 476 aaPredicted RBP eCLIP9.28□□□□□ -0.92
ZNF560-202ENST00000585974 PCMTD1Q96MG8 357 aaPredicted RBP9.28□□□□□ -0.92
ZNF560-202ENST00000585974 ATP1B4Q9UN42 357 aaPredicted RBP9.28□□□□□ -0.92
ZNF560-202ENST00000585974 AXIN1O15169 862 aa9.27□□□□□ -0.93
ZNF560-202ENST00000585974 BRPF1P55201 1214 aaPredicted RBP9.27□□□□□ -0.93
ZNF560-202ENST00000585974 NBPF14Q5TI25 921 aa9.27□□□□□ -0.93
ZNF560-202ENST00000585974 AAASQ9NRG9 546 aa9.27□□□□□ -0.93
ZNF560-202ENST00000585974 MAP10Q9P2G4 905 aa9.27□□□□□ -0.93
ZNF560-202ENST00000585974 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
ZNF560-202ENST00000585974 BPHLQ86WA6 291 aaPredicted RBP9.26□□□□□ -0.93
ZNF560-202ENST00000585974 FAM174AQ8TBP5 190 aa9.26□□□□□ -0.93
ZNF560-202ENST00000585974 J3QL48 77 aa9.25□□□□□ -0.93
ZNF560-202ENST00000585974 ALDH1A1P00352 501 aa9.25□□□□□ -0.93
ZNF560-202ENST00000585974 LINC01559Q495D7 138 aa9.25□□□□□ -0.93
ZNF560-202ENST00000585974 CTDSPL2Q05D32 466 aa9.24□□□□□ -0.93
ZNF560-202ENST00000585974 TMEM259Q4ZIN3 620 aa9.24□□□□□ -0.93
ZNF560-202ENST00000585974 PNMA1Q8ND90 353 aa9.23□□□□□ -0.93
ZNF560-202ENST00000585974 WASF2Q9Y6W5 498 aa9.23□□□□□ -0.93
ZNF560-202ENST00000585974 ZC3H4Q9UPT8 1303 aaKnown RBP9.23□□□□□ -0.93
ZNF560-202ENST00000585974 IL27Q8NEV9 243 aa9.22□□□□□ -0.93
ZNF560-202ENST00000585974 CDK15Q96Q40 435 aa9.22□□□□□ -0.93
ZNF560-202ENST00000585974 AP1G2O75843 785 aa9.2□□□□□ -0.94
ZNF560-202ENST00000585974 AGERQ15109 404 aa9.2□□□□□ -0.94
ZNF560-202ENST00000585974 PDXDC2PQ6P474 469 aa9.2□□□□□ -0.94
ZNF560-202ENST00000585974 ST8SIA5O15466 376 aa9.19□□□□□ -0.94
ZNF560-202ENST00000585974 RFC5P40937 340 aa9.19□□□□□ -0.94
ZNF560-202ENST00000585974 HPS1Q92902 700 aa9.19□□□□□ -0.94
ZNF560-202ENST00000585974 FOXJ1Q92949 421 aa9.19□□□□□ -0.94
ZNF560-202ENST00000585974 FKBPLQ9UIM3 349 aa9.19□□□□□ -0.94
ZNF560-202ENST00000585974 GPSM3Q9Y4H4 160 aa9.19□□□□□ -0.94
ZNF560-202ENST00000585974 SH3BP5LQ7L8J4 393 aa9.18□□□□□ -0.94
ZNF560-202ENST00000585974 SH3RF1Q7Z6J0 888 aa9.18□□□□□ -0.94
ZNF560-202ENST00000585974 C1QTNF2Q9BXJ5 285 aa9.18□□□□□ -0.94
ZNF560-202ENST00000585974 NR5A1Q13285 461 aa9.17□□□□□ -0.94
ZNF560-202ENST00000585974 FBXO31Q5XUX0 539 aaPredicted RBP9.17□□□□□ -0.94
ZNF560-202ENST00000585974 TRMT44Q8IYL2 757 aaKnown RBP9.17□□□□□ -0.94
ZNF560-202ENST00000585974 SENP2Q9HC62 589 aa9.17□□□□□ -0.94
ZNF560-202ENST00000585974 ADH1CP00326 375 aa9.16□□□□□ -0.94
ZNF560-202ENST00000585974 LRRN4Q8WUT4 740 aa9.16□□□□□ -0.94
ZNF560-202ENST00000585974 MAP4K5Q9Y4K4 846 aa9.16□□□□□ -0.94
ZNF560-202ENST00000585974 BANK1Q8NDB2 785 aa9.15□□□□□ -0.94
ZNF560-202ENST00000585974 CDV3Q9UKY7 258 aaKnown RBP9.15□□□□□ -0.94
ZNF560-202ENST00000585974 SOCS7O14512 581 aa9.14□□□□□ -0.95
ZNF560-202ENST00000585974 USP17L8P0C7I0 530 aa9.14□□□□□ -0.95
ZNF560-202ENST00000585974 PTK2Q05397 1052 aa9.14□□□□□ -0.95
ZNF560-202ENST00000585974 NR6A1Q15406 480 aa9.14□□□□□ -0.95
ZNF560-202ENST00000585974 C4orf48Q5BLP8 95 aa9.14□□□□□ -0.95
ZNF560-202ENST00000585974 KIFC2Q96AC6 838 aa9.14□□□□□ -0.95
ZNF560-202ENST00000585974 ATP13A2Q9NQ11 1180 aa9.14□□□□□ -0.95
ZNF560-202ENST00000585974 TLL2Q9Y6L7 1015 aa9.14□□□□□ -0.95
ZNF560-202ENST00000585974 CAPN5O15484 640 aaPredicted RBP9.12□□□□□ -0.95
ZNF560-202ENST00000585974 NNTQ13423 1086 aa9.12□□□□□ -0.95
ZNF560-202ENST00000585974 ARHGAP9Q9BRR9 750 aa9.12□□□□□ -0.95
ZNF560-202ENST00000585974 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
ZNF560-202ENST00000585974 GRM5P41594 1212 aa9.11□□□□□ -0.95
ZNF560-202ENST00000585974 C11orf95C9JLR9 678 aaPredicted RBP9.1□□□□□ -0.95
ZNF560-202ENST00000585974 APBB1O00213 710 aa9.1□□□□□ -0.95
ZNF560-202ENST00000585974 ARID5BQ14865 1188 aa9.1□□□□□ -0.95
ZNF560-202ENST00000585974 ZBTB33Q86T24 672 aa9.1□□□□□ -0.95
ZNF560-202ENST00000585974 GMPR2Q9P2T1 348 aaKnown RBP9.1□□□□□ -0.95
ZNF560-202ENST00000585974 MAGEB6P1A0A0J9YX57 407 aa9.09□□□□□ -0.95
ZNF560-202ENST00000585974 POTECB2RU33 542 aa9.09□□□□□ -0.95
ZNF560-202ENST00000585974 ERFEQ4G0M1 354 aa9.09□□□□□ -0.95
ZNF560-202ENST00000585974 VASH1Q7L8A9 365 aaPredicted RBP9.09□□□□□ -0.95
ZNF560-202ENST00000585974 TRIM47Q96LD4 638 aa9.09□□□□□ -0.95
ZNF560-202ENST00000585974 KLF16Q9BXK1 252 aaPredicted RBP9.09□□□□□ -0.95
ZNF560-202ENST00000585974 WDR4P57081 412 aaKnown RBP9.08□□□□□ -0.96
ZNF560-202ENST00000585974 TRIM52Q96A61 297 aa9.07□□□□□ -0.96
ZNF560-202ENST00000585974 TIMP2P16035 220 aa9.06□□□□□ -0.96
ZNF560-202ENST00000585974 SLC10A4Q96EP9 437 aa9.06□□□□□ -0.96
ZNF560-202ENST00000585974 HMX1Q9NP08 348 aaPredicted RBP9.06□□□□□ -0.96
ZNF560-202ENST00000585974 EMILIN1Q9Y6C2 1016 aa9.06□□□□□ -0.96
ZNF560-202ENST00000585974 DHX9Q08211 1270 aaKnown RBP9.05□□□□□ -0.96
ZNF560-202ENST00000585974 SCARF1Q14162 830 aa9.05□□□□□ -0.96
ZNF560-202ENST00000585974 ZNF592Q92610 1267 aa9.05□□□□□ -0.96
ZNF560-202ENST00000585974 ZNF775Q96BV0 537 aaPredicted RBP9.05□□□□□ -0.96
ZNF560-202ENST00000585974 CARD14Q9BXL6 1004 aa9.05□□□□□ -0.96
ZNF560-202ENST00000585974 TRIM34Q9BYJ4 488 aa9.05□□□□□ -0.96
ZNF560-202ENST00000585974 CCDC125Q86Z20 511 aa9.04□□□□□ -0.96
ZNF560-202ENST00000585974 CCDC116Q8IYX3 515 aa9.04□□□□□ -0.96
ZNF560-202ENST00000585974 EPS8L1Q8TE68 723 aa9.04□□□□□ -0.96
ZNF560-202ENST00000585974 FSHRP23945 695 aa9.03□□□□□ -0.96
ZNF560-202ENST00000585974 MCCD1P59942 119 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms