RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 LMOD2Q6P5Q4 547 aa15.41■□□□□ 0.06
MBD3-203ENST00000585903 HIRIP3Q9BW71 556 aaPredicted RBP15.41■□□□□ 0.06
MBD3-203ENST00000585903 POLR3AO14802 1390 aaPredicted RBP15.4■□□□□ 0.06
MBD3-203ENST00000585903 SEPT12Q8IYM1 358 aa15.4■□□□□ 0.06
MBD3-203ENST00000585903 NGDNQ8NEJ9 315 aaKnown RBP15.39■□□□□ 0.05
MBD3-203ENST00000585903 KRT27Q7Z3Y8 459 aa15.38■□□□□ 0.05
MBD3-203ENST00000585903 NUDT16Q96DE0 195 aaKnown RBP15.38■□□□□ 0.05
MBD3-203ENST00000585903 BRD4O60885 1362 aaPredicted RBP15.37■□□□□ 0.05
MBD3-203ENST00000585903 CCDC61Q9Y6R9 512 aa15.37■□□□□ 0.05
MBD3-203ENST00000585903 PHRF1Q9P1Y6 1649 aaKnown RBP15.36■□□□□ 0.05
MBD3-203ENST00000585903 THSD7AQ9UPZ6 1657 aa15.36■□□□□ 0.05
MBD3-203ENST00000585903 PLEKHG3A1L390 1219 aa15.36■□□□□ 0.05
MBD3-203ENST00000585903 SF3B2Q13435 895 aaKnown RBP15.36■□□□□ 0.05
MBD3-203ENST00000585903 BTG4Q9NY30 223 aa15.36■□□□□ 0.05
MBD3-203ENST00000585903 TRIM26Q12899 539 aaPredicted RBP15.35■□□□□ 0.05
MBD3-203ENST00000585903 CCDC9Q9Y3X0 531 aaKnown RBP15.35■□□□□ 0.05
MBD3-203ENST00000585903 SPATA31A5Q5VU36 1347 aa15.35■□□□□ 0.05
MBD3-203ENST00000585903 SPATA31A7Q8IWB4 1347 aa15.35■□□□□ 0.05
MBD3-203ENST00000585903 CDK19Q9BWU1 502 aa15.34■□□□□ 0.05
MBD3-203ENST00000585903 RGPD1P0DJD0 1748 aa15.34■□□□□ 0.05
MBD3-203ENST00000585903 PSDA5PKW4 1024 aaPredicted RBP15.33■□□□□ 0.04
MBD3-203ENST00000585903 PRDM11Q9NQV5 511 aa15.33■□□□□ 0.04
MBD3-203ENST00000585903 PAK3O75914 559 aaPredicted RBP15.32■□□□□ 0.04
MBD3-203ENST00000585903 CPDO75976 1380 aa15.32■□□□□ 0.04
MBD3-203ENST00000585903 DISP2A7MBM2 1401 aa15.32■□□□□ 0.04
MBD3-203ENST00000585903 NBPF8Q3BBV2 869 aa15.31■□□□□ 0.04
MBD3-203ENST00000585903 ACEP12821 1306 aa15.31■□□□□ 0.04
MBD3-203ENST00000585903 USP19O94966 1318 aa15.3■□□□□ 0.04
MBD3-203ENST00000585903 FAM98CQ17RN3 349 aaKnown RBP15.3■□□□□ 0.04
MBD3-203ENST00000585903 NRKQ7Z2Y5 1582 aa15.3■□□□□ 0.04
MBD3-203ENST00000585903 KIAA0232Q92628 1395 aa15.3■□□□□ 0.04
MBD3-203ENST00000585903 CENPJQ9HC77 1338 aaPredicted RBP15.3■□□□□ 0.04
MBD3-203ENST00000585903 QRICH2Q9H0J4 1663 aa15.29■□□□□ 0.04
MBD3-203ENST00000585903 SPATA31A1Q5TZJ5 1347 aa15.29■□□□□ 0.04
MBD3-203ENST00000585903 BAG6P46379 1132 aa15.29■□□□□ 0.04
MBD3-203ENST00000585903 LMO7Q8WWI1 1683 aa15.28■□□□□ 0.04
MBD3-203ENST00000585903 PPIP5K1Q6PFW1 1433 aa15.27■□□□□ 0.04
MBD3-203ENST00000585903 TNS1Q9HBL0 1735 aaKnown RBP15.27■□□□□ 0.04
MBD3-203ENST00000585903 NBPF1Q3BBV0 1214 aa15.27■□□□□ 0.04
MBD3-203ENST00000585903 BARGINQ6ZT62 677 aa15.27■□□□□ 0.04
MBD3-203ENST00000585903 TRPM1Q7Z4N2 1603 aa15.26■□□□□ 0.03
MBD3-203ENST00000585903 A0A0G2JS52 829 aa15.26■□□□□ 0.03
MBD3-203ENST00000585903 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
MBD3-203ENST00000585903 MYT1Q01538 1121 aa15.26■□□□□ 0.03
MBD3-203ENST00000585903 NLRP13Q86W25 1043 aa15.26■□□□□ 0.03
MBD3-203ENST00000585903 SSH2Q76I76 1423 aa15.26■□□□□ 0.03
MBD3-203ENST00000585903 C11orf95C9JLR9 678 aaPredicted RBP15.25■□□□□ 0.03
MBD3-203ENST00000585903 ABTB2Q8N961 1025 aa15.25■□□□□ 0.03
MBD3-203ENST00000585903 THRAP3Q9Y2W1 955 aaKnown RBP15.25■□□□□ 0.03
MBD3-203ENST00000585903 PARD3Q8TEW0 1356 aa15.24■□□□□ 0.03
MBD3-203ENST00000585903 SRPK2P78362 688 aaKnown RBP15.24■□□□□ 0.03
MBD3-203ENST00000585903 FAM196AQ6ZSG2 479 aa15.24■□□□□ 0.03
MBD3-203ENST00000585903 CAMTA1Q9Y6Y1 1673 aa15.23■□□□□ 0.03
MBD3-203ENST00000585903 USP6P35125 1406 aa15.23■□□□□ 0.03
MBD3-203ENST00000585903 SLIT3O75094 1523 aa15.22■□□□□ 0.03
MBD3-203ENST00000585903 GCP02774 474 aa15.22■□□□□ 0.03
MBD3-203ENST00000585903 ZC3H6P61129 1189 aaKnown RBP15.22■□□□□ 0.03
MBD3-203ENST00000585903 EN1Q05925 392 aaPredicted RBP15.22■□□□□ 0.03
MBD3-203ENST00000585903 R3HDM1Q15032 1099 aaKnown RBP15.22■□□□□ 0.03
MBD3-203ENST00000585903 L3MBTL2Q969R5 705 aa15.22■□□□□ 0.03
MBD3-203ENST00000585903 PARP4Q9UKK3 1724 aaKnown RBP15.22■□□□□ 0.03
MBD3-203ENST00000585903 EVC2Q86UK5 1308 aa15.21■□□□□ 0.03
MBD3-203ENST00000585903 YY1P25490 414 aa15.21■□□□□ 0.03
MBD3-203ENST00000585903 CHRNA2Q15822 529 aa15.21■□□□□ 0.03
MBD3-203ENST00000585903 EVA1CP58658 441 aa15.2■□□□□ 0.02
MBD3-203ENST00000585903 TCP11L2Q8N4U5 519 aa15.2■□□□□ 0.02
MBD3-203ENST00000585903 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
MBD3-203ENST00000585903 AATKQ6ZMQ8 1374 aa15.2■□□□□ 0.02
MBD3-203ENST00000585903 SBNO2Q9Y2G9 1366 aa15.2■□□□□ 0.02
MBD3-203ENST00000585903 COL5A2P05997 1499 aaPredicted RBP15.2■□□□□ 0.02
MBD3-203ENST00000585903 AKAP12Q02952 1782 aa15.19■□□□□ 0.02
MBD3-203ENST00000585903 CABP2Q9NPB3 220 aa15.19■□□□□ 0.02
MBD3-203ENST00000585903 STRN4Q9NRL3 753 aa15.19■□□□□ 0.02
MBD3-203ENST00000585903 ABCC6O95255 1503 aa15.18■□□□□ 0.02
MBD3-203ENST00000585903 NUTM2GQ5VZR2 741 aa15.18■□□□□ 0.02
MBD3-203ENST00000585903 CABP1Q9NZU7 370 aa15.18■□□□□ 0.02
MBD3-203ENST00000585903 PIK3C2AO00443 1686 aa15.18■□□□□ 0.02
MBD3-203ENST00000585903 CRB1P82279 1406 aa15.17■□□□□ 0.02
MBD3-203ENST00000585903 RREB1Q92766 1687 aa15.17■□□□□ 0.02
MBD3-203ENST00000585903 ROCK2O75116 1388 aaKnown RBP15.17■□□□□ 0.02
MBD3-203ENST00000585903 RGPD3A6NKT7 1758 aaPredicted RBP15.16■□□□□ 0.02
MBD3-203ENST00000585903 COL18A1P39060 1754 aa15.16■□□□□ 0.02
MBD3-203ENST00000585903 RGPD4Q7Z3J3 1758 aa15.16■□□□□ 0.02
MBD3-203ENST00000585903 PDE3BQ13370 1112 aa15.16■□□□□ 0.02
MBD3-203ENST00000585903 LARP1Q6PKG0 1096 aaKnown RBP15.16■□□□□ 0.02
MBD3-203ENST00000585903 CAMKK2Q96RR4 588 aa15.16■□□□□ 0.02
MBD3-203ENST00000585903 TTC21AQ8NDW8 1320 aa15.16■□□□□ 0.02
MBD3-203ENST00000585903 NLRP6P59044 892 aa15.15■□□□□ 0.02
MBD3-203ENST00000585903 PCGF6Q9BYE7 350 aa15.15■□□□□ 0.02
MBD3-203ENST00000585903 CPSF1Q10570 1443 aaKnown RBP15.15■□□□□ 0.02
MBD3-203ENST00000585903 USP54Q70EL1 1684 aa15.15■□□□□ 0.02
MBD3-203ENST00000585903 EZH2Q15910 746 aaKnown RBP15.14■□□□□ 0.01
MBD3-203ENST00000585903 KCNH5Q8NCM2 988 aa15.14■□□□□ 0.01
MBD3-203ENST00000585903 CDCA7Q9BWT1 371 aaPredicted RBP15.14■□□□□ 0.01
MBD3-203ENST00000585903 BCL9O00512 1426 aa15.14■□□□□ 0.01
MBD3-203ENST00000585903 NUP188Q5SRE5 1749 aa15.14■□□□□ 0.01
MBD3-203ENST00000585903 PEAK1Q9H792 1746 aa15.14■□□□□ 0.01
MBD3-203ENST00000585903 WNK3Q9BYP7 1800 aa15.13■□□□□ 0.01
MBD3-203ENST00000585903 TRIM37O94972 964 aa15.13■□□□□ 0.01
MBD3-203ENST00000585903 FAM182BQ5T319 152 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms