RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-206ENST00000585856 NGDNQ8NEJ9 315 aaKnown RBP38.76■■■■□ 3.8
PTBP1-206ENST00000585856 ATP7BP35670 1465 aa38.73■■■■□ 3.79
PTBP1-206ENST00000585856 BTG4Q9NY30 223 aa38.7■■■■□ 3.79
PTBP1-206ENST00000585856 SF3B2Q13435 895 aaKnown RBP38.69■■■■□ 3.78
PTBP1-206ENST00000585856 KRT27Q7Z3Y8 459 aa38.69■■■■□ 3.78
PTBP1-206ENST00000585856 PAK3O75914 559 aaPredicted RBP38.67■■■■□ 3.78
PTBP1-206ENST00000585856 NUDT16Q96DE0 195 aaKnown RBP38.66■■■■□ 3.78
PTBP1-206ENST00000585856 TOPAZ1Q8N9V7 1692 aa38.65■■■■□ 3.78
PTBP1-206ENST00000585856 A0A0G2JS52 829 aa38.62■■■■□ 3.77
PTBP1-206ENST00000585856 MYT1Q01538 1121 aa38.62■■■■□ 3.77
PTBP1-206ENST00000585856 PHRF1Q9P1Y6 1649 aaKnown RBP38.61■■■■□ 3.77
PTBP1-206ENST00000585856 FAM98CQ17RN3 349 aaKnown RBP38.59■■■■□ 3.77
PTBP1-206ENST00000585856 SRCAPQ6ZRS2 3230 aa38.59■■■■□ 3.77
PTBP1-206ENST00000585856 CDK19Q9BWU1 502 aa38.59■■■■□ 3.77
PTBP1-206ENST00000585856 PRDM11Q9NQV5 511 aa38.59■■■■□ 3.77
PTBP1-206ENST00000585856 POLR3AO14802 1390 aaPredicted RBP38.57■■■■□ 3.77
PTBP1-206ENST00000585856 DEFB132Q7Z7B7 95 aa38.57■■■■□ 3.76
PTBP1-206ENST00000585856 SPATA31A5Q5VU36 1347 aa38.56■■■■□ 3.76
PTBP1-206ENST00000585856 SPATA31A7Q8IWB4 1347 aa38.56■■■■□ 3.76
PTBP1-206ENST00000585856 CCDC61Q9Y6R9 512 aa38.55■■■■□ 3.76
PTBP1-206ENST00000585856 THSD7AQ9UPZ6 1657 aa38.53■■■■□ 3.76
PTBP1-206ENST00000585856 RGPD1P0DJD0 1748 aa38.52■■■■□ 3.76
PTBP1-206ENST00000585856 KIAA0232Q92628 1395 aa38.5■■■■□ 3.75
PTBP1-206ENST00000585856 ACEP12821 1306 aa38.5■■■■□ 3.75
PTBP1-206ENST00000585856 PLEKHG3A1L390 1219 aa38.49■■■■□ 3.75
PTBP1-206ENST00000585856 NBPF8Q3BBV2 869 aa38.48■■■■□ 3.75
PTBP1-206ENST00000585856 BAG6P46379 1132 aa38.47■■■■□ 3.75
PTBP1-206ENST00000585856 NBPF1Q3BBV0 1214 aa38.46■■■■□ 3.75
PTBP1-206ENST00000585856 NRKQ7Z2Y5 1582 aa38.42■■■■□ 3.74
PTBP1-206ENST00000585856 QRICH2Q9H0J4 1663 aa38.42■■■■□ 3.74
PTBP1-206ENST00000585856 SPATA31A1Q5TZJ5 1347 aa38.41■■■■□ 3.74
PTBP1-206ENST00000585856 CENPJQ9HC77 1338 aaPredicted RBP38.41■■■■□ 3.74
PTBP1-206ENST00000585856 CHRNA2Q15822 529 aa38.4■■■■□ 3.74
PTBP1-206ENST00000585856 ZC3H6P61129 1189 aaKnown RBP38.39■■■■□ 3.74
PTBP1-206ENST00000585856 NUTM2GQ5VZR2 741 aa38.39■■■■□ 3.74
PTBP1-206ENST00000585856 SRPK2P78362 688 aaKnown RBP38.38■■■■□ 3.73
PTBP1-206ENST00000585856 ABTB2Q8N961 1025 aa38.38■■■■□ 3.73
PTBP1-206ENST00000585856 PPIP5K1Q6PFW1 1433 aa38.38■■■■□ 3.73
PTBP1-206ENST00000585856 STRN4Q9NRL3 753 aa38.37■■■■□ 3.73
PTBP1-206ENST00000585856 TNS1Q9HBL0 1735 aaKnown RBP38.37■■■■□ 3.73
PTBP1-206ENST00000585856 BRD4O60885 1362 aaPredicted RBP38.35■■■■□ 3.73
PTBP1-206ENST00000585856 LRP5O75197 1615 aa38.35■■■■□ 3.73
PTBP1-206ENST00000585856 CPDO75976 1380 aa38.34■■■■□ 3.73
PTBP1-206ENST00000585856 USP19O94966 1318 aa38.34■■■■□ 3.73
PTBP1-206ENST00000585856 LMO7Q8WWI1 1683 aa38.33■■■■□ 3.73
PTBP1-206ENST00000585856 DISP2A7MBM2 1401 aa38.32■■■■□ 3.73
PTBP1-206ENST00000585856 SSH2Q76I76 1423 aa38.32■■■■□ 3.73
PTBP1-206ENST00000585856 FAM182BQ5T319 152 aa38.32■■■■□ 3.72
PTBP1-206ENST00000585856 NLRP13Q86W25 1043 aa38.31■■■■□ 3.72
PTBP1-206ENST00000585856 EVA1CP58658 441 aa38.3■■■■□ 3.72
PTBP1-206ENST00000585856 CAMTA1Q9Y6Y1 1673 aa38.3■■■■□ 3.72
PTBP1-206ENST00000585856 BARGINQ6ZT62 677 aa38.28■■■■□ 3.72
PTBP1-206ENST00000585856 CABP2Q9NPB3 220 aa38.28■■■■□ 3.72
PTBP1-206ENST00000585856 TRPM1Q7Z4N2 1603 aa38.27■■■■□ 3.72
PTBP1-206ENST00000585856 FAM196AQ6ZSG2 479 aa38.27■■■■□ 3.72
PTBP1-206ENST00000585856 EN1Q05925 392 aaPredicted RBP38.26■■■■□ 3.72
PTBP1-206ENST00000585856 L3MBTL2Q969R5 705 aa38.25■■■■□ 3.71
PTBP1-206ENST00000585856 USP35Q9P2H5 1018 aa38.24■■■■□ 3.71
PTBP1-206ENST00000585856 GCP02774 474 aa38.23■■■■□ 3.71
PTBP1-206ENST00000585856 USP6P35125 1406 aa38.22■■■■□ 3.71
PTBP1-206ENST00000585856 LARP1Q6PKG0 1096 aaKnown RBP38.19■■■■□ 3.7
PTBP1-206ENST00000585856 TCP11L2Q8N4U5 519 aa38.19■■■■□ 3.7
PTBP1-206ENST00000585856 PSDA5PKW4 1024 aaPredicted RBP38.18■■■■□ 3.7
PTBP1-206ENST00000585856 PDE3BQ13370 1112 aa38.18■■■■□ 3.7
PTBP1-206ENST00000585856 CABP1Q9NZU7 370 aa38.18■■■■□ 3.7
PTBP1-206ENST00000585856 THRAP3Q9Y2W1 955 aaKnown RBP38.18■■■■□ 3.7
PTBP1-206ENST00000585856 EVC2Q86UK5 1308 aa38.17■■■■□ 3.7
PTBP1-206ENST00000585856 COL5A2P05997 1499 aaPredicted RBP38.17■■■■□ 3.7
PTBP1-206ENST00000585856 PARP4Q9UKK3 1724 aaKnown RBP38.17■■■■□ 3.7
PTBP1-206ENST00000585856 SLIT3O75094 1523 aa38.16■■■■□ 3.7
PTBP1-206ENST00000585856 TRIM37O94972 964 aa38.15■■■■□ 3.7
PTBP1-206ENST00000585856 PARD3Q8TEW0 1356 aa38.15■■■■□ 3.7
PTBP1-206ENST00000585856 PIK3C2AO00443 1686 aa38.13■■■■□ 3.69
PTBP1-206ENST00000585856 NLRP6P59044 892 aa38.12■■■■□ 3.69
PTBP1-206ENST00000585856 ROCK2O75116 1388 aaKnown RBP38.11■■■■□ 3.69
PTBP1-206ENST00000585856 EZH2Q15910 746 aaKnown RBP38.11■■■■□ 3.69
PTBP1-206ENST00000585856 AKAP12Q02952 1782 aa38.11■■■■□ 3.69
PTBP1-206ENST00000585856 CAMKK2Q96RR4 588 aa38.1■■■■□ 3.69
PTBP1-206ENST00000585856 CRB1P82279 1406 aa38.1■■■■□ 3.69
PTBP1-206ENST00000585856 AATKQ6ZMQ8 1374 aa38.09■■■■□ 3.69
PTBP1-206ENST00000585856 SIN3AQ96ST3 1273 aa38.09■■■■□ 3.69
PTBP1-206ENST00000585856 RREB1Q92766 1687 aa38.08■■■■□ 3.69
PTBP1-206ENST00000585856 APBA3O96018 575 aa38.07■■■■□ 3.68
PTBP1-206ENST00000585856 R3HDM1Q15032 1099 aaKnown RBP38.06■■■■□ 3.68
PTBP1-206ENST00000585856 C11orf95C9JLR9 678 aaPredicted RBP38.05■■■■□ 3.68
PTBP1-206ENST00000585856 ZNF692Q9BU19 519 aaPredicted RBP38.05■■■■□ 3.68
PTBP1-206ENST00000585856 COL18A1P39060 1754 aa38.05■■■■□ 3.68
PTBP1-206ENST00000585856 NEUROD1Q13562 356 aa38.02■■■■□ 3.68
PTBP1-206ENST00000585856 NUP188Q5SRE5 1749 aa38.01■■■■□ 3.68
PTBP1-206ENST00000585856 ZBTB7CA1YPR0 619 aa38■■■■□ 3.67
PTBP1-206ENST00000585856 WNK3Q9BYP7 1800 aa38■■■■□ 3.67
PTBP1-206ENST00000585856 LRRC37A3O60309 1634 aa37.98■■■■□ 3.67
PTBP1-206ENST00000585856 TTC21AQ8NDW8 1320 aa37.97■■■■□ 3.67
PTBP1-206ENST00000585856 PEAK1Q9H792 1746 aa37.97■■■■□ 3.67
PTBP1-206ENST00000585856 CPSF1Q10570 1443 aaKnown RBP37.96■■■■□ 3.67
PTBP1-206ENST00000585856 TTC21BQ7Z4L5 1316 aa37.96■■■■□ 3.67
PTBP1-206ENST00000585856 KCNH5Q8NCM2 988 aa37.96■■■■□ 3.67
PTBP1-206ENST00000585856 OVOS2A0A0G2JMS6 1433 aa37.95■■■■□ 3.67
PTBP1-206ENST00000585856 OVOS2A0A0J9YW53 1432 aa37.95■■■■□ 3.67
PTBP1-206ENST00000585856 OVOS2Q6IE36 1432 aa37.95■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 746.8 ms