RNA–Protein interactions for RNA: ENST00000585839.5

PKN1-204, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 3,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-204ENST00000585839 HSP90AB1P08238 724 aaKnown RBP23.39■■□□□ 1.34
PKN1-204ENST00000585839 AEBP1Q8IUX7 1158 aa23.39■■□□□ 1.34
PKN1-204ENST00000585839 NPC1L1Q9UHC9 1359 aa23.39■■□□□ 1.34
PKN1-204ENST00000585839 SLC52A1Q9NWF4 448 aa23.39■■□□□ 1.34
PKN1-204ENST00000585839 MCM10Q7L590 875 aa23.39■■□□□ 1.33
PKN1-204ENST00000585839 USP19O94966 1318 aa23.39■■□□□ 1.33
PKN1-204ENST00000585839 POLKQ9UBT6 870 aa23.38■■□□□ 1.33
PKN1-204ENST00000585839 RPGRIP1LQ68CZ1 1315 aa23.38■■□□□ 1.33
PKN1-204ENST00000585839 COG3Q96JB2 828 aa23.38■■□□□ 1.33
PKN1-204ENST00000585839 CEBPAP49715 358 aaPredicted RBP23.38■■□□□ 1.33
PKN1-204ENST00000585839 HSCBQ8IWL3 235 aa23.37■■□□□ 1.33
PKN1-204ENST00000585839 UHRF1BP1LA0JNW5 1464 aa23.37■■□□□ 1.33
PKN1-204ENST00000585839 SULT6B1Q6IMI4 303 aa23.37■■□□□ 1.33
PKN1-204ENST00000585839 FOXD4L5Q5VV16 416 aaPredicted RBP23.36■■□□□ 1.33
PKN1-204ENST00000585839 FOXD4L4Q8WXT5 416 aaPredicted RBP23.36■■□□□ 1.33
PKN1-204ENST00000585839 SHROOM2Q13796 1616 aa23.36■■□□□ 1.33
PKN1-204ENST00000585839 NGEFQ8N5V2 710 aa23.36■■□□□ 1.33
PKN1-204ENST00000585839 MAP3K4Q9Y6R4 1608 aa23.35■■□□□ 1.33
PKN1-204ENST00000585839 NOL8Q76FK4 1167 aaKnown RBP23.34■■□□□ 1.33
PKN1-204ENST00000585839 TWISTNBQ3B726 338 aaPredicted RBP23.34■■□□□ 1.33
PKN1-204ENST00000585839 RBM42Q9BTD8 480 aaKnown RBP23.33■■□□□ 1.33
PKN1-204ENST00000585839 TET3O43151 1660 aa23.33■■□□□ 1.33
PKN1-204ENST00000585839 C8orf58Q8NAV2 365 aa23.33■■□□□ 1.33
PKN1-204ENST00000585839 CEP152O94986 1710 aa23.32■■□□□ 1.32
PKN1-204ENST00000585839 NCLP19338 710 aaKnown RBP23.32■■□□□ 1.32
PKN1-204ENST00000585839 IQGAP1P46940 1657 aa23.32■■□□□ 1.32
PKN1-204ENST00000585839 NUDT16Q96DE0 195 aaKnown RBP23.32■■□□□ 1.32
PKN1-204ENST00000585839 PLEKHF1Q96S99 279 aa23.31■■□□□ 1.32
PKN1-204ENST00000585839 SMARCA5O60264 1052 aaPredicted RBP23.31■■□□□ 1.32
PKN1-204ENST00000585839 MBIPQ9NS73 344 aa23.31■■□□□ 1.32
PKN1-204ENST00000585839 POGZQ7Z3K3 1410 aa23.31■■□□□ 1.32
PKN1-204ENST00000585839 PPRC1Q5VV67 1664 aaKnown RBP23.3■■□□□ 1.32
PKN1-204ENST00000585839 RNF17Q9BXT8 1623 aaKnown RBP23.3■■□□□ 1.32
PKN1-204ENST00000585839 TBC1D32Q96NH3 1257 aa23.3■■□□□ 1.32
PKN1-204ENST00000585839 EFCAB6Q5THR3 1501 aa23.29■■□□□ 1.32
PKN1-204ENST00000585839 C16orf71Q8IYS4 520 aaPredicted RBP23.29■■□□□ 1.32
PKN1-204ENST00000585839 CLASP1Q7Z460 1538 aa23.29■■□□□ 1.32
PKN1-204ENST00000585839 LMOD2Q6P5Q4 547 aa23.29■■□□□ 1.32
PKN1-204ENST00000585839 PNNQ9H307 717 aaKnown RBP23.28■■□□□ 1.32
PKN1-204ENST00000585839 CHD1LQ86WJ1 897 aa23.27■■□□□ 1.32
PKN1-204ENST00000585839 KIF1BO60333 1816 aa23.27■■□□□ 1.32
PKN1-204ENST00000585839 MROH2AA6NES4 1674 aa23.27■■□□□ 1.31
PKN1-204ENST00000585839 FOXD4L6Q3SYB3 417 aaPredicted RBP23.26■■□□□ 1.31
PKN1-204ENST00000585839 FOXD4L3Q6VB84 417 aaPredicted RBP23.26■■□□□ 1.31
PKN1-204ENST00000585839 KIF16BQ96L93 1317 aa23.26■■□□□ 1.31
PKN1-204ENST00000585839 NFE2L2Q16236 605 aa23.26■■□□□ 1.31
PKN1-204ENST00000585839 TSHZ3Q63HK5 1081 aa23.26■■□□□ 1.31
PKN1-204ENST00000585839 MYOM2P54296 1465 aa23.26■■□□□ 1.31
PKN1-204ENST00000585839 F6X3S4 739 aa23.25■■□□□ 1.31
PKN1-204ENST00000585839 FOXO3O43524 673 aa23.25■■□□□ 1.31
PKN1-204ENST00000585839 FCHSD2O94868 740 aa23.25■■□□□ 1.31
PKN1-204ENST00000585839 HSP90AB2PQ58FF8 381 aa23.25■■□□□ 1.31
PKN1-204ENST00000585839 LAMC1P11047 1609 aa23.24■■□□□ 1.31
PKN1-204ENST00000585839 NGDNQ8NEJ9 315 aaKnown RBP23.24■■□□□ 1.31
PKN1-204ENST00000585839 RSPH6AQ9H0K4 717 aa23.24■■□□□ 1.31
PKN1-204ENST00000585839 CCDC27Q2M243 656 aa23.24■■□□□ 1.31
PKN1-204ENST00000585839 YTHDC2Q9H6S0 1430 aaKnown RBP23.23■■□□□ 1.31
PKN1-204ENST00000585839 ZBTB40Q9NUA8 1239 aa23.22■■□□□ 1.31
PKN1-204ENST00000585839 MYOM1P52179 1685 aa23.22■■□□□ 1.31
PKN1-204ENST00000585839 WASLO00401 505 aaPredicted RBP23.21■■□□□ 1.31
PKN1-204ENST00000585839 OTUD7AQ8TE49 926 aaPredicted RBP23.21■■□□□ 1.31
PKN1-204ENST00000585839 KIDINS220Q9ULH0 1771 aa23.21■■□□□ 1.31
PKN1-204ENST00000585839 VAMP4O75379 141 aa23.21■■□□□ 1.31
PKN1-204ENST00000585839 GNAI1P63096 354 aa23.21■■□□□ 1.31
PKN1-204ENST00000585839 AMPHP49418 695 aa23.2■■□□□ 1.3
PKN1-204ENST00000585839 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
PKN1-204ENST00000585839 SBNO2Q9Y2G9 1366 aa23.2■■□□□ 1.3
PKN1-204ENST00000585839 PANK2Q9BZ23 570 aa23.19■■□□□ 1.3
PKN1-204ENST00000585839 INO80Q9ULG1 1556 aaPredicted RBP23.19■■□□□ 1.3
PKN1-204ENST00000585839 RTF1Q92541 710 aaKnown RBP23.18■■□□□ 1.3
PKN1-204ENST00000585839 ABCC11Q96J66 1382 aa23.18■■□□□ 1.3
PKN1-204ENST00000585839 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
PKN1-204ENST00000585839 CCDC61Q9Y6R9 512 aa23.17■■□□□ 1.3
PKN1-204ENST00000585839 SLC4A2P04920 1241 aa23.17■■□□□ 1.3
PKN1-204ENST00000585839 MROH1Q8NDA8 1641 aa23.17■■□□□ 1.3
PKN1-204ENST00000585839 USHBP1Q8N6Y0 703 aa23.16■■□□□ 1.3
PKN1-204ENST00000585839 NINLQ9Y2I6 1382 aa23.16■■□□□ 1.3
PKN1-204ENST00000585839 ABCC3O15438 1527 aa23.16■■□□□ 1.3
PKN1-204ENST00000585839 MRPL50Q8N5N7 158 aaKnown RBP23.15■■□□□ 1.3
PKN1-204ENST00000585839 TRAK2O60296 914 aa23.14■■□□□ 1.3
PKN1-204ENST00000585839 QRICH2Q9H0J4 1663 aa23.14■■□□□ 1.29
PKN1-204ENST00000585839 GOLGA6L3A6NEY3 463 aa23.13■■□□□ 1.29
PKN1-204ENST00000585839 DTNBO60941 627 aa23.13■■□□□ 1.29
PKN1-204ENST00000585839 MCM4P33991 863 aa23.13■■□□□ 1.29
PKN1-204ENST00000585839 CHMP5Q9NZZ3 219 aa23.13■■□□□ 1.29
PKN1-204ENST00000585839 ADGRB3O60242 1522 aa23.13■■□□□ 1.29
PKN1-204ENST00000585839 EIF2S2P20042 333 aaKnown RBP23.13■■□□□ 1.29
PKN1-204ENST00000585839 TBC1D9Q6ZT07 1266 aa23.13■■□□□ 1.29
PKN1-204ENST00000585839 TSPYL4Q9UJ04 414 aa23.13■■□□□ 1.29
PKN1-204ENST00000585839 CD2BP2O95400 341 aaKnown RBP23.12■■□□□ 1.29
PKN1-204ENST00000585839 PPIP5K1Q6PFW1 1433 aa23.12■■□□□ 1.29
PKN1-204ENST00000585839 ZBTB7BO15156 539 aaPredicted RBP23.12■■□□□ 1.29
PKN1-204ENST00000585839 NUCB1Q02818 461 aa23.12■■□□□ 1.29
PKN1-204ENST00000585839 ABCA9Q8IUA7 1624 aa23.12■■□□□ 1.29
PKN1-204ENST00000585839 HDAC1Q13547 482 aaPredicted RBP23.11■■□□□ 1.29
PKN1-204ENST00000585839 EXOC6BQ9Y2D4 811 aa23.11■■□□□ 1.29
PKN1-204ENST00000585839 IL13P35225 146 aa23.11■■□□□ 1.29
PKN1-204ENST00000585839 CALD1Q05682 793 aaKnown RBP23.11■■□□□ 1.29
PKN1-204ENST00000585839 SMC5Q8IY18 1101 aa23.11■■□□□ 1.29
PKN1-204ENST00000585839 MEIS3Q99687 375 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms