RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SPATA31A7Q8IWB4 1347 aa21.17■□□□□ 0.98
SDF2-202ENST00000585428 TRPM3Q9HCF6 1732 aaPredicted RBP21.17■□□□□ 0.98
SDF2-202ENST00000585428 PLCH1Q4KWH8 1693 aa21.16■□□□□ 0.98
SDF2-202ENST00000585428 CDK19Q9BWU1 502 aa21.16■□□□□ 0.98
SDF2-202ENST00000585428 ABCA3Q99758 1704 aa21.15■□□□□ 0.98
SDF2-202ENST00000585428 A0A0G2JS52 829 aa21.14■□□□□ 0.97
SDF2-202ENST00000585428 MYT1Q01538 1121 aa21.14■□□□□ 0.97
SDF2-202ENST00000585428 ALS2Q96Q42 1657 aa21.14■□□□□ 0.97
SDF2-202ENST00000585428 PRDM11Q9NQV5 511 aa21.13■□□□□ 0.97
SDF2-202ENST00000585428 BAG6P46379 1132 aa21.12■□□□□ 0.97
SDF2-202ENST00000585428 NBPF8Q3BBV2 869 aa21.12■□□□□ 0.97
SDF2-202ENST00000585428 CCDC61Q9Y6R9 512 aa21.12■□□□□ 0.97
SDF2-202ENST00000585428 PLEKHG3A1L390 1219 aa21.11■□□□□ 0.97
SDF2-202ENST00000585428 FAM182BQ5T319 152 aa21.11■□□□□ 0.97
SDF2-202ENST00000585428 COL14A1Q05707 1796 aaKnown RBP21.1■□□□□ 0.97
SDF2-202ENST00000585428 ACEP12821 1306 aa21.09■□□□□ 0.97
SDF2-202ENST00000585428 SPATA31A1Q5TZJ5 1347 aa21.09■□□□□ 0.97
SDF2-202ENST00000585428 ATP7BP35670 1465 aa21.09■□□□□ 0.97
SDF2-202ENST00000585428 CHRNA2Q15822 529 aa21.09■□□□□ 0.97
SDF2-202ENST00000585428 NRAPQ86VF7 1730 aa21.09■□□□□ 0.97
SDF2-202ENST00000585428 POLR3AO14802 1390 aaPredicted RBP21.09■□□□□ 0.97
SDF2-202ENST00000585428 KIAA0232Q92628 1395 aa21.09■□□□□ 0.97
SDF2-202ENST00000585428 EN1Q05925 392 aaPredicted RBP21.08■□□□□ 0.97
SDF2-202ENST00000585428 NBPF1Q3BBV0 1214 aa21.08■□□□□ 0.97
SDF2-202ENST00000585428 ZC3H6P61129 1189 aaKnown RBP21.07■□□□□ 0.96
SDF2-202ENST00000585428 NUTM2GQ5VZR2 741 aa21.07■□□□□ 0.96
SDF2-202ENST00000585428 PSDA5PKW4 1024 aaPredicted RBP21.04■□□□□ 0.96
SDF2-202ENST00000585428 STRN4Q9NRL3 753 aa21.04■□□□□ 0.96
SDF2-202ENST00000585428 FAM196AQ6ZSG2 479 aa21.03■□□□□ 0.96
SDF2-202ENST00000585428 ABTB2Q8N961 1025 aa21.03■□□□□ 0.96
SDF2-202ENST00000585428 CRYBG1Q9Y4K1 1723 aa21.03■□□□□ 0.96
SDF2-202ENST00000585428 EVA1CP58658 441 aa21.02■□□□□ 0.96
SDF2-202ENST00000585428 BARGINQ6ZT62 677 aa21.02■□□□□ 0.96
SDF2-202ENST00000585428 ARHGEF28Q8N1W1 1705 aaKnown RBP21.01■□□□□ 0.95
SDF2-202ENST00000585428 CAMKK2Q96RR4 588 aa21.01■□□□□ 0.95
SDF2-202ENST00000585428 DISP2A7MBM2 1401 aa21■□□□□ 0.95
SDF2-202ENST00000585428 THSD7AQ9UPZ6 1657 aa20.99■□□□□ 0.95
SDF2-202ENST00000585428 TRIM37O94972 964 aa20.99■□□□□ 0.95
SDF2-202ENST00000585428 EZH2Q15910 746 aaKnown RBP20.99■□□□□ 0.95
SDF2-202ENST00000585428 USP35Q9P2H5 1018 aa20.99■□□□□ 0.95
SDF2-202ENST00000585428 CPDO75976 1380 aa20.98■□□□□ 0.95
SDF2-202ENST00000585428 GCP02774 474 aa20.98■□□□□ 0.95
SDF2-202ENST00000585428 LARP1Q6PKG0 1096 aaKnown RBP20.98■□□□□ 0.95
SDF2-202ENST00000585428 NLRP13Q86W25 1043 aa20.98■□□□□ 0.95
SDF2-202ENST00000585428 USP19O94966 1318 aa20.98■□□□□ 0.95
SDF2-202ENST00000585428 ADRA2BP18089 450 aa20.97■□□□□ 0.95
SDF2-202ENST00000585428 SRPK2P78362 688 aaKnown RBP20.96■□□□□ 0.95
SDF2-202ENST00000585428 R3HDM1Q15032 1099 aaKnown RBP20.96■□□□□ 0.95
SDF2-202ENST00000585428 TCP11L2Q8N4U5 519 aa20.96■□□□□ 0.95
SDF2-202ENST00000585428 CABP2Q9NPB3 220 aa20.96■□□□□ 0.95
SDF2-202ENST00000585428 CENPJQ9HC77 1338 aaPredicted RBP20.96■□□□□ 0.95
SDF2-202ENST00000585428 SSH2Q76I76 1423 aa20.95■□□□□ 0.95
SDF2-202ENST00000585428 APBA3O96018 575 aa20.95■□□□□ 0.94
SDF2-202ENST00000585428 PDE3BQ13370 1112 aa20.95■□□□□ 0.94
SDF2-202ENST00000585428 THRAP3Q9Y2W1 955 aaKnown RBP20.95■□□□□ 0.94
SDF2-202ENST00000585428 CAMTA1Q9Y6Y1 1673 aa20.95■□□□□ 0.94
SDF2-202ENST00000585428 ITSN1Q15811 1721 aa20.95■□□□□ 0.94
SDF2-202ENST00000585428 CABP1Q9NZU7 370 aa20.94■□□□□ 0.94
SDF2-202ENST00000585428 KIAA1210Q9ULL0 1709 aa20.93■□□□□ 0.94
SDF2-202ENST00000585428 BRD4O60885 1362 aaPredicted RBP20.93■□□□□ 0.94
SDF2-202ENST00000585428 LRP5O75197 1615 aa20.93■□□□□ 0.94
SDF2-202ENST00000585428 PPIP5K1Q6PFW1 1433 aa20.92■□□□□ 0.94
SDF2-202ENST00000585428 TOPAZ1Q8N9V7 1692 aa20.91■□□□□ 0.94
SDF2-202ENST00000585428 L3MBTL2Q969R5 705 aa20.91■□□□□ 0.94
SDF2-202ENST00000585428 PHRF1Q9P1Y6 1649 aaKnown RBP20.91■□□□□ 0.94
SDF2-202ENST00000585428 RGPD1P0DJD0 1748 aa20.9■□□□□ 0.94
SDF2-202ENST00000585428 PARD3Q8TEW0 1356 aa20.89■□□□□ 0.93
SDF2-202ENST00000585428 NLRP6P59044 892 aa20.89■□□□□ 0.93
SDF2-202ENST00000585428 NRKQ7Z2Y5 1582 aa20.87■□□□□ 0.93
SDF2-202ENST00000585428 TNS1Q9HBL0 1735 aaKnown RBP20.86■□□□□ 0.93
SDF2-202ENST00000585428 LMO7Q8WWI1 1683 aa20.86■□□□□ 0.93
SDF2-202ENST00000585428 AATKQ6ZMQ8 1374 aa20.85■□□□□ 0.93
SDF2-202ENST00000585428 C11orf95C9JLR9 678 aaPredicted RBP20.85■□□□□ 0.93
SDF2-202ENST00000585428 USP6P35125 1406 aa20.85■□□□□ 0.93
SDF2-202ENST00000585428 COL5A2P05997 1499 aaPredicted RBP20.84■□□□□ 0.93
SDF2-202ENST00000585428 AXIN2Q9Y2T1 843 aa20.84■□□□□ 0.93
SDF2-202ENST00000585428 EVC2Q86UK5 1308 aa20.83■□□□□ 0.93
SDF2-202ENST00000585428 SIN3AQ96ST3 1273 aa20.83■□□□□ 0.93
SDF2-202ENST00000585428 ZNF692Q9BU19 519 aaPredicted RBP20.83■□□□□ 0.93
SDF2-202ENST00000585428 CRB1P82279 1406 aa20.82■□□□□ 0.92
SDF2-202ENST00000585428 NBPF14Q5TI25 921 aa20.82■□□□□ 0.92
SDF2-202ENST00000585428 ARHGEF25Q86VW2 580 aa20.8■□□□□ 0.92
SDF2-202ENST00000585428 ZBTB7CA1YPR0 619 aa20.79■□□□□ 0.92
SDF2-202ENST00000585428 PLSCR1O15162 318 aa20.79■□□□□ 0.92
SDF2-202ENST00000585428 TTC21BQ7Z4L5 1316 aa20.78■□□□□ 0.92
SDF2-202ENST00000585428 DDB1Q16531 1140 aa20.78■□□□□ 0.92
SDF2-202ENST00000585428 TOM1L2Q6ZVM7 507 aa20.78■□□□□ 0.92
SDF2-202ENST00000585428 SLIT3O75094 1523 aa20.78■□□□□ 0.92
SDF2-202ENST00000585428 KCNH5Q8NCM2 988 aa20.77■□□□□ 0.92
SDF2-202ENST00000585428 WDR17Q8IZU2 1322 aa20.77■□□□□ 0.91
SDF2-202ENST00000585428 NEUROD1Q13562 356 aa20.75■□□□□ 0.91
SDF2-202ENST00000585428 BCL11BQ9C0K0 894 aaPredicted RBP20.75■□□□□ 0.91
SDF2-202ENST00000585428 PTF1AQ7RTS3 328 aa20.74■□□□□ 0.91
SDF2-202ENST00000585428 MARCH10Q8NA82 808 aaPredicted RBP20.74■□□□□ 0.91
SDF2-202ENST00000585428 CDCA7Q9BWT1 371 aaPredicted RBP20.74■□□□□ 0.91
SDF2-202ENST00000585428 TTC21AQ8NDW8 1320 aa20.74■□□□□ 0.91
SDF2-202ENST00000585428 OVOS2A0A0G2JMS6 1433 aa20.73■□□□□ 0.91
SDF2-202ENST00000585428 OVOS2A0A0J9YW53 1432 aa20.73■□□□□ 0.91
SDF2-202ENST00000585428 CPSF1Q10570 1443 aaKnown RBP20.73■□□□□ 0.91
SDF2-202ENST00000585428 OVOS2Q6IE36 1432 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms