RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 TTC21BQ7Z4L5 1316 aa17.58■□□□□ 0.4
TRIM47-202ENST00000585333 NRKQ7Z2Y5 1582 aa17.57■□□□□ 0.4
TRIM47-202ENST00000585333 ARHGEF10O15013 1369 aa17.57■□□□□ 0.4
TRIM47-202ENST00000585333 AMER1Q5JTC6 1135 aaPredicted RBP17.57■□□□□ 0.4
TRIM47-202ENST00000585333 KRT28Q7Z3Y7 464 aa17.57■□□□□ 0.4
TRIM47-202ENST00000585333 SSH2Q76I76 1423 aa17.56■□□□□ 0.4
TRIM47-202ENST00000585333 COG3Q96JB2 828 aa17.56■□□□□ 0.4
TRIM47-202ENST00000585333 PAK3O75914 559 aaPredicted RBP17.55■□□□□ 0.4
TRIM47-202ENST00000585333 ROBO1Q9Y6N7 1651 aa17.55■□□□□ 0.4
TRIM47-202ENST00000585333 NHSL1Q5SYE7 1610 aa17.54■□□□□ 0.4
TRIM47-202ENST00000585333 AHDC1Q5TGY3 1603 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-202ENST00000585333 KIF20BQ96Q89 1820 aa17.54■□□□□ 0.4
TRIM47-202ENST00000585333 SOS2Q07890 1332 aaPredicted RBP17.54■□□□□ 0.4
TRIM47-202ENST00000585333 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
TRIM47-202ENST00000585333 ILDR2Q71H61 639 aa17.54■□□□□ 0.4
TRIM47-202ENST00000585333 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.54■□□□□ 0.4
TRIM47-202ENST00000585333 USP31Q70CQ4 1352 aa17.53■□□□□ 0.4
TRIM47-202ENST00000585333 MORC1Q86VD1 984 aa17.53■□□□□ 0.4
TRIM47-202ENST00000585333 NLRP13Q86W25 1043 aa17.53■□□□□ 0.4
TRIM47-202ENST00000585333 ABTB2Q8N961 1025 aa17.53■□□□□ 0.4
TRIM47-202ENST00000585333 TNS3Q68CZ2 1445 aa17.53■□□□□ 0.4
TRIM47-202ENST00000585333 PXDNQ92626 1479 aa17.52■□□□□ 0.4
TRIM47-202ENST00000585333 FYB1O15117 783 aa17.52■□□□□ 0.4
TRIM47-202ENST00000585333 LRRC59Q96AG4 307 aaKnown RBP17.52■□□□□ 0.4
TRIM47-202ENST00000585333 PRKRIP1Q9H875 184 aaPredicted RBP17.52■□□□□ 0.4
TRIM47-202ENST00000585333 ANKRD26Q9UPS8 1709 aa17.52■□□□□ 0.39
TRIM47-202ENST00000585333 PARD3Q8TEW0 1356 aa17.52■□□□□ 0.39
TRIM47-202ENST00000585333 CC2D1BQ5T0F9 858 aaKnown RBP17.51■□□□□ 0.39
TRIM47-202ENST00000585333 NLRP6P59044 892 aa17.5■□□□□ 0.39
TRIM47-202ENST00000585333 PIP4K2BP78356 416 aa17.5■□□□□ 0.39
TRIM47-202ENST00000585333 KCNH5Q8NCM2 988 aa17.5■□□□□ 0.39
TRIM47-202ENST00000585333 TRPM3Q9HCF6 1732 aaPredicted RBP17.5■□□□□ 0.39
TRIM47-202ENST00000585333 SPATA31A3Q5VYP0 1347 aa17.49■□□□□ 0.39
TRIM47-202ENST00000585333 MYBBP1AQ9BQG0 1328 aaKnown RBP17.49■□□□□ 0.39
TRIM47-202ENST00000585333 USP54Q70EL1 1684 aa17.49■□□□□ 0.39
TRIM47-202ENST00000585333 OVOS2A0A0J9YW53 1432 aa17.48■□□□□ 0.39
TRIM47-202ENST00000585333 OVOS2Q6IE36 1432 aa17.48■□□□□ 0.39
TRIM47-202ENST00000585333 NME9Q86XW9 330 aa17.48■□□□□ 0.39
TRIM47-202ENST00000585333 GGNBP2Q9H3C7 697 aa17.48■□□□□ 0.39
TRIM47-202ENST00000585333 SOCS7O14512 581 aa17.47■□□□□ 0.39
TRIM47-202ENST00000585333 LMOD2Q6P5Q4 547 aa17.47■□□□□ 0.39
TRIM47-202ENST00000585333 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
TRIM47-202ENST00000585333 PIK3C2AO00443 1686 aa17.46■□□□□ 0.39
TRIM47-202ENST00000585333 ALS2Q96Q42 1657 aa17.46■□□□□ 0.39
TRIM47-202ENST00000585333 MED1Q15648 1581 aaPredicted RBP17.45■□□□□ 0.38
TRIM47-202ENST00000585333 CCER2I3L3R5 266 aa17.45■□□□□ 0.38
TRIM47-202ENST00000585333 XPCQ01831 940 aaPredicted RBP17.45■□□□□ 0.38
TRIM47-202ENST00000585333 PHLPP1O60346 1717 aa17.44■□□□□ 0.38
TRIM47-202ENST00000585333 KIF24Q5T7B8 1368 aa17.44■□□□□ 0.38
TRIM47-202ENST00000585333 CFAP53Q96M91 514 aa17.44■□□□□ 0.38
TRIM47-202ENST00000585333 USP19O94966 1318 aa17.44■□□□□ 0.38
TRIM47-202ENST00000585333 HAP1P54257 671 aaPredicted RBP17.41■□□□□ 0.38
TRIM47-202ENST00000585333 CNGB1Q14028 1251 aaPredicted RBP17.41■□□□□ 0.38
TRIM47-202ENST00000585333 DDX17Q92841 729 aaKnown RBP17.41■□□□□ 0.38
TRIM47-202ENST00000585333 SLIT3O75094 1523 aa17.41■□□□□ 0.38
TRIM47-202ENST00000585333 COL16A1Q07092 1604 aaPredicted RBP17.4■□□□□ 0.38
TRIM47-202ENST00000585333 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
TRIM47-202ENST00000585333 RTL1A6NKG5 1358 aa17.4■□□□□ 0.38
TRIM47-202ENST00000585333 JCADQ9P266 1359 aa17.39■□□□□ 0.37
TRIM47-202ENST00000585333 GCP02774 474 aa17.38■□□□□ 0.37
TRIM47-202ENST00000585333 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
TRIM47-202ENST00000585333 ABCC6O95255 1503 aa17.37■□□□□ 0.37
TRIM47-202ENST00000585333 COL22A1Q8NFW1 1626 aaPredicted RBP17.37■□□□□ 0.37
TRIM47-202ENST00000585333 TNNT2P45379 298 aaPredicted RBP17.37■□□□□ 0.37
TRIM47-202ENST00000585333 PNPLA6Q8IY17 1366 aa17.37■□□□□ 0.37
TRIM47-202ENST00000585333 NUTM2GQ5VZR2 741 aa17.36■□□□□ 0.37
TRIM47-202ENST00000585333 MIER1Q8N108 512 aa17.36■□□□□ 0.37
TRIM47-202ENST00000585333 CDK12Q9NYV4 1490 aaPredicted RBP17.36■□□□□ 0.37
TRIM47-202ENST00000585333 ZRANB1Q9UGI0 708 aa17.35■□□□□ 0.37
TRIM47-202ENST00000585333 SPATA31A6Q5VVP1 1343 aa17.35■□□□□ 0.37
TRIM47-202ENST00000585333 CPDO75976 1380 aa17.35■□□□□ 0.37
TRIM47-202ENST00000585333 FLT4P35916 1363 aa17.35■□□□□ 0.37
TRIM47-202ENST00000585333 SHPRHQ149N8 1683 aa17.35■□□□□ 0.37
TRIM47-202ENST00000585333 NFAT5O94916 1531 aa17.34■□□□□ 0.37
TRIM47-202ENST00000585333 INSRP06213 1382 aa17.34■□□□□ 0.37
TRIM47-202ENST00000585333 AMPHP49418 695 aa17.34■□□□□ 0.37
TRIM47-202ENST00000585333 MTHFSP49914 203 aa17.34■□□□□ 0.37
TRIM47-202ENST00000585333 MRS2Q9HD23 443 aa17.34■□□□□ 0.37
TRIM47-202ENST00000585333 PHRF1Q9P1Y6 1649 aaKnown RBP17.34■□□□□ 0.37
TRIM47-202ENST00000585333 NUDCQ9Y266 331 aa17.34■□□□□ 0.37
TRIM47-202ENST00000585333 POLKQ9UBT6 870 aa17.33■□□□□ 0.36
TRIM47-202ENST00000585333 MARF1Q9Y4F3 1742 aaKnown RBP17.33■□□□□ 0.36
TRIM47-202ENST00000585333 BLMP54132 1417 aaPredicted RBP17.32■□□□□ 0.36
TRIM47-202ENST00000585333 MAP3K19Q56UN5 1328 aa17.31■□□□□ 0.36
TRIM47-202ENST00000585333 SOX12O15370 315 aa17.31■□□□□ 0.36
TRIM47-202ENST00000585333 ARHGEF25Q86VW2 580 aa17.31■□□□□ 0.36
TRIM47-202ENST00000585333 CRYBG1Q9Y4K1 1723 aa17.3■□□□□ 0.36
TRIM47-202ENST00000585333 PPM1GO15355 546 aaPredicted RBP17.3■□□□□ 0.36
TRIM47-202ENST00000585333 MAP2P11137 1827 aaKnown RBP17.3■□□□□ 0.36
TRIM47-202ENST00000585333 RRS1Q15050 365 aaKnown RBP17.29■□□□□ 0.36
TRIM47-202ENST00000585333 WDR43Q15061 677 aaKnown RBP eCLIP17.29■□□□□ 0.36
TRIM47-202ENST00000585333 IP6K1Q92551 441 aa17.29■□□□□ 0.36
TRIM47-202ENST00000585333 PNNQ9H307 717 aaKnown RBP17.29■□□□□ 0.36
TRIM47-202ENST00000585333 PRDM11Q9NQV5 511 aa17.29■□□□□ 0.36
TRIM47-202ENST00000585333 ABCA3Q99758 1704 aa17.28■□□□□ 0.36
TRIM47-202ENST00000585333 DIAPH1O60610 1272 aaKnown RBP17.28■□□□□ 0.36
TRIM47-202ENST00000585333 HSPA1LP34931 641 aa17.28■□□□□ 0.36
TRIM47-202ENST00000585333 EMILIN1Q9Y6C2 1016 aa17.28■□□□□ 0.36
TRIM47-202ENST00000585333 LTN1O94822 1766 aa17.27■□□□□ 0.35
TRIM47-202ENST00000585333 HOXC9P31274 260 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms