RNA–Protein interactions for RNA: ENST00000585323.5

NEDD4L-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 381 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-210ENST00000585323 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
NEDD4L-210ENST00000585323 CABLES1Q8TDN4 633 aa17.54■□□□□ 0.4
NEDD4L-210ENST00000585323 BRD4O60885 1362 aaPredicted RBP17.53■□□□□ 0.4
NEDD4L-210ENST00000585323 NGLY1Q96IV0 654 aa17.53■□□□□ 0.4
NEDD4L-210ENST00000585323 AKAP12Q02952 1782 aa17.53■□□□□ 0.4
NEDD4L-210ENST00000585323 CPSF1Q10570 1443 aaKnown RBP17.52■□□□□ 0.4
NEDD4L-210ENST00000585323 SSH2Q76I76 1423 aa17.52■□□□□ 0.4
NEDD4L-210ENST00000585323 NRKQ7Z2Y5 1582 aa17.52■□□□□ 0.39
NEDD4L-210ENST00000585323 PHRF1Q9P1Y6 1649 aaKnown RBP17.51■□□□□ 0.39
NEDD4L-210ENST00000585323 FNBP4Q8N3X1 1017 aaPredicted RBP17.51■□□□□ 0.39
NEDD4L-210ENST00000585323 PUS7Q96PZ0 661 aaKnown RBP17.51■□□□□ 0.39
NEDD4L-210ENST00000585323 PLEKHG5O94827 1062 aa17.5■□□□□ 0.39
NEDD4L-210ENST00000585323 HAP1P54257 671 aaPredicted RBP17.5■□□□□ 0.39
NEDD4L-210ENST00000585323 SLIT2O94813 1529 aa17.5■□□□□ 0.39
NEDD4L-210ENST00000585323 CD163L1Q9NR16 1453 aa17.5■□□□□ 0.39
NEDD4L-210ENST00000585323 SLC24A1O60721 1099 aa17.49■□□□□ 0.39
NEDD4L-210ENST00000585323 MON2Q7Z3U7 1717 aa17.49■□□□□ 0.39
NEDD4L-210ENST00000585323 BCL9LQ86UU0 1499 aa17.49■□□□□ 0.39
NEDD4L-210ENST00000585323 USP21Q9UK80 565 aa17.48■□□□□ 0.39
NEDD4L-210ENST00000585323 PIK3C2AO00443 1686 aa17.48■□□□□ 0.39
NEDD4L-210ENST00000585323 PLCH1Q4KWH8 1693 aa17.48■□□□□ 0.39
NEDD4L-210ENST00000585323 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.47■□□□□ 0.39
NEDD4L-210ENST00000585323 ZNF692Q9BU19 519 aaPredicted RBP17.47■□□□□ 0.39
NEDD4L-210ENST00000585323 ATRNO75882 1429 aa17.47■□□□□ 0.39
NEDD4L-210ENST00000585323 USP19O94966 1318 aa17.47■□□□□ 0.39
NEDD4L-210ENST00000585323 NINLQ9Y2I6 1382 aa17.46■□□□□ 0.39
NEDD4L-210ENST00000585323 NUTM2GQ5VZR2 741 aa17.46■□□□□ 0.39
NEDD4L-210ENST00000585323 ABTB2Q8N961 1025 aa17.46■□□□□ 0.39
NEDD4L-210ENST00000585323 KTN1Q86UP2 1357 aaKnown RBP17.45■□□□□ 0.38
NEDD4L-210ENST00000585323 NWD2Q9ULI1 1742 aa17.45■□□□□ 0.38
NEDD4L-210ENST00000585323 SOCS7O14512 581 aa17.45■□□□□ 0.38
NEDD4L-210ENST00000585323 TMF1P82094 1093 aa17.45■□□□□ 0.38
NEDD4L-210ENST00000585323 COL14A1Q05707 1796 aaKnown RBP17.45■□□□□ 0.38
NEDD4L-210ENST00000585323 CDK12Q9NYV4 1490 aaPredicted RBP17.44■□□□□ 0.38
NEDD4L-210ENST00000585323 TMC1Q8TDI8 760 aa17.44■□□□□ 0.38
NEDD4L-210ENST00000585323 SLC12A5Q9H2X9 1139 aa17.44■□□□□ 0.38
NEDD4L-210ENST00000585323 QTRT2Q9H974 415 aaKnown RBP17.44■□□□□ 0.38
NEDD4L-210ENST00000585323 TTC21BQ7Z4L5 1316 aa17.44■□□□□ 0.38
NEDD4L-210ENST00000585323 A0A1W2PP64 1363 aa17.43■□□□□ 0.38
NEDD4L-210ENST00000585323 SLIT3O75094 1523 aa17.43■□□□□ 0.38
NEDD4L-210ENST00000585323 RXRBP28702 533 aa17.43■□□□□ 0.38
NEDD4L-210ENST00000585323 TRPC5Q9UL62 973 aaPredicted RBP17.43■□□□□ 0.38
NEDD4L-210ENST00000585323 NRAPQ86VF7 1730 aa17.43■□□□□ 0.38
NEDD4L-210ENST00000585323 TTC21AQ8NDW8 1320 aa17.43■□□□□ 0.38
NEDD4L-210ENST00000585323 FAM83GA6ND36 823 aa17.42■□□□□ 0.38
NEDD4L-210ENST00000585323 RBM6P78332 1123 aaKnown RBP17.42■□□□□ 0.38
NEDD4L-210ENST00000585323 NLRP13Q86W25 1043 aa17.42■□□□□ 0.38
NEDD4L-210ENST00000585323 KIAA0232Q92628 1395 aa17.41■□□□□ 0.38
NEDD4L-210ENST00000585323 EDC4Q6P2E9 1401 aaKnown RBP17.41■□□□□ 0.38
NEDD4L-210ENST00000585323 HDGFL2Q7Z4V5 671 aaPredicted RBP17.41■□□□□ 0.38
NEDD4L-210ENST00000585323 UNC5CLQ8IV45 518 aa17.41■□□□□ 0.38
NEDD4L-210ENST00000585323 RGS12O14924 1447 aa17.4■□□□□ 0.38
NEDD4L-210ENST00000585323 MYOM1P52179 1685 aa17.4■□□□□ 0.38
NEDD4L-210ENST00000585323 USP54Q70EL1 1684 aa17.4■□□□□ 0.38
NEDD4L-210ENST00000585323 NLRP6P59044 892 aa17.4■□□□□ 0.38
NEDD4L-210ENST00000585323 EIF4G2P78344 907 aaKnown RBP eCLIP17.4■□□□□ 0.38
NEDD4L-210ENST00000585323 TERF2IPQ9NYB0 399 aa17.4■□□□□ 0.38
NEDD4L-210ENST00000585323 CPDO75976 1380 aa17.4■□□□□ 0.38
NEDD4L-210ENST00000585323 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
NEDD4L-210ENST00000585323 CDCA8Q53HL2 280 aa17.39■□□□□ 0.37
NEDD4L-210ENST00000585323 PRDM11Q9NQV5 511 aa17.39■□□□□ 0.37
NEDD4L-210ENST00000585323 GLI3P10071 1580 aa17.39■□□□□ 0.37
NEDD4L-210ENST00000585323 ANKRD36BQ8N2N9 1353 aa17.39■□□□□ 0.37
NEDD4L-210ENST00000585323 GCP02774 474 aa17.38■□□□□ 0.37
NEDD4L-210ENST00000585323 LMO7Q8WWI1 1683 aa17.38■□□□□ 0.37
NEDD4L-210ENST00000585323 ZC3H6P61129 1189 aaKnown RBP17.37■□□□□ 0.37
NEDD4L-210ENST00000585323 BTG4Q9NY30 223 aa17.37■□□□□ 0.37
NEDD4L-210ENST00000585323 USP31Q70CQ4 1352 aa17.37■□□□□ 0.37
NEDD4L-210ENST00000585323 VPS72Q15906 364 aa17.36■□□□□ 0.37
NEDD4L-210ENST00000585323 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.36■□□□□ 0.378e-7■■□□□ 12.8
NEDD4L-210ENST00000585323 GJD4Q96KN9 370 aaPredicted RBP17.36■□□□□ 0.37
NEDD4L-210ENST00000585323 CHRNA2Q15822 529 aa17.35■□□□□ 0.37
NEDD4L-210ENST00000585323 NME9Q86XW9 330 aa17.35■□□□□ 0.37
NEDD4L-210ENST00000585323 NFAT5O94916 1531 aa17.35■□□□□ 0.37
NEDD4L-210ENST00000585323 CAMTA1Q9Y6Y1 1673 aa17.33■□□□□ 0.37
NEDD4L-210ENST00000585323 OVOS2A0A0J9YW53 1432 aa17.33■□□□□ 0.36
NEDD4L-210ENST00000585323 OVOS2Q6IE36 1432 aa17.33■□□□□ 0.36
NEDD4L-210ENST00000585323 ZRANB1Q9UGI0 708 aa17.33■□□□□ 0.36
NEDD4L-210ENST00000585323 KCNH5Q8NCM2 988 aa17.31■□□□□ 0.36
NEDD4L-210ENST00000585323 AATKQ6ZMQ8 1374 aa17.3■□□□□ 0.36
NEDD4L-210ENST00000585323 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
NEDD4L-210ENST00000585323 COL18A1P39060 1754 aa17.3■□□□□ 0.36
NEDD4L-210ENST00000585323 COL5A2P05997 1499 aaPredicted RBP17.3■□□□□ 0.36
NEDD4L-210ENST00000585323 ABCC6O95255 1503 aa17.29■□□□□ 0.36
NEDD4L-210ENST00000585323 SPATA31A5Q5VU36 1347 aa17.28■□□□□ 0.36
NEDD4L-210ENST00000585323 SPATA31A7Q8IWB4 1347 aa17.28■□□□□ 0.36
NEDD4L-210ENST00000585323 SOX12O15370 315 aa17.28■□□□□ 0.36
NEDD4L-210ENST00000585323 ARHGEF25Q86VW2 580 aa17.28■□□□□ 0.36
NEDD4L-210ENST00000585323 STRN4Q9NRL3 753 aa17.27■□□□□ 0.36
NEDD4L-210ENST00000585323 ZBTB7CA1YPR0 619 aa17.26■□□□□ 0.35
NEDD4L-210ENST00000585323 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
NEDD4L-210ENST00000585323 CARD14Q9BXL6 1004 aa17.26■□□□□ 0.35
NEDD4L-210ENST00000585323 NSD3Q9BZ95 1437 aa17.26■□□□□ 0.35
NEDD4L-210ENST00000585323 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
NEDD4L-210ENST00000585323 SPATA31A1Q5TZJ5 1347 aa17.25■□□□□ 0.35
NEDD4L-210ENST00000585323 C11orf95C9JLR9 678 aaPredicted RBP17.25■□□□□ 0.35
NEDD4L-210ENST00000585323 POLR3GLQ9BT43 218 aa17.25■□□□□ 0.35
NEDD4L-210ENST00000585323 KIF20BQ96Q89 1820 aa17.25■□□□□ 0.35
NEDD4L-210ENST00000585323 COG3Q96JB2 828 aa17.24■□□□□ 0.35
NEDD4L-210ENST00000585323 LTN1O94822 1766 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms