RNA–Protein interactions for RNA: ENST00000585294.5

CUEDC1-213, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-213ENST00000585294 ALS2Q96Q42 1657 aa18.35■□□□□ 0.53
CUEDC1-213ENST00000585294 ONECUT3O60422 494 aaPredicted RBP18.35■□□□□ 0.53
CUEDC1-213ENST00000585294 KIAA1210Q9ULL0 1709 aa18.35■□□□□ 0.53
CUEDC1-213ENST00000585294 PLEKHG3A1L390 1219 aa18.34■□□□□ 0.53
CUEDC1-213ENST00000585294 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
CUEDC1-213ENST00000585294 CENPJQ9HC77 1338 aaPredicted RBP18.33■□□□□ 0.53
CUEDC1-213ENST00000585294 PLCH1Q4KWH8 1693 aa18.33■□□□□ 0.52
CUEDC1-213ENST00000585294 POLR3AO14802 1390 aaPredicted RBP18.32■□□□□ 0.52
CUEDC1-213ENST00000585294 SRPK2P78362 688 aaKnown RBP18.32■□□□□ 0.52
CUEDC1-213ENST00000585294 CHRNA2Q15822 529 aa18.31■□□□□ 0.52
CUEDC1-213ENST00000585294 FAM98CQ17RN3 349 aaKnown RBP18.31■□□□□ 0.52
CUEDC1-213ENST00000585294 CCDC125Q86Z20 511 aa18.31■□□□□ 0.52
CUEDC1-213ENST00000585294 PRDM11Q9NQV5 511 aa18.31■□□□□ 0.52
CUEDC1-213ENST00000585294 NWD2Q9ULI1 1742 aa18.3■□□□□ 0.52
CUEDC1-213ENST00000585294 ZC3H6P61129 1189 aaKnown RBP18.3■□□□□ 0.52
CUEDC1-213ENST00000585294 KIAA0232Q92628 1395 aa18.3■□□□□ 0.52
CUEDC1-213ENST00000585294 A0A0G2JS52 829 aa18.28■□□□□ 0.52
CUEDC1-213ENST00000585294 MYT1Q01538 1121 aa18.28■□□□□ 0.52
CUEDC1-213ENST00000585294 KRT27Q7Z3Y8 459 aa18.28■□□□□ 0.52
CUEDC1-213ENST00000585294 ITSN1Q15811 1721 aa18.27■□□□□ 0.52
CUEDC1-213ENST00000585294 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
CUEDC1-213ENST00000585294 DEFB132Q7Z7B7 95 aa18.27■□□□□ 0.52
CUEDC1-213ENST00000585294 ABTB2Q8N961 1025 aa18.27■□□□□ 0.52
CUEDC1-213ENST00000585294 CABP1Q9NZU7 370 aa18.27■□□□□ 0.52
CUEDC1-213ENST00000585294 BRWD3Q6RI45 1802 aa18.27■□□□□ 0.52
CUEDC1-213ENST00000585294 NRAPQ86VF7 1730 aa18.26■□□□□ 0.51
CUEDC1-213ENST00000585294 CRYBG1Q9Y4K1 1723 aa18.26■□□□□ 0.51
CUEDC1-213ENST00000585294 SPATA31A5Q5VU36 1347 aa18.26■□□□□ 0.51
CUEDC1-213ENST00000585294 SPATA31A7Q8IWB4 1347 aa18.26■□□□□ 0.51
CUEDC1-213ENST00000585294 TOPAZ1Q8N9V7 1692 aa18.26■□□□□ 0.51
CUEDC1-213ENST00000585294 COL14A1Q05707 1796 aaKnown RBP18.26■□□□□ 0.51
CUEDC1-213ENST00000585294 EP400Q96L91 3159 aa18.25■□□□□ 0.51
CUEDC1-213ENST00000585294 FAM182BQ5T319 152 aa18.25■□□□□ 0.51
CUEDC1-213ENST00000585294 BLMP54132 1417 aaPredicted RBP18.24■□□□□ 0.51
CUEDC1-213ENST00000585294 STRN4Q9NRL3 753 aa18.24■□□□□ 0.51
CUEDC1-213ENST00000585294 ZRANB1Q9UGI0 708 aa18.23■□□□□ 0.51
CUEDC1-213ENST00000585294 ROCK2O75116 1388 aaKnown RBP18.22■□□□□ 0.51
CUEDC1-213ENST00000585294 QRICH2Q9H0J4 1663 aa18.21■□□□□ 0.51
CUEDC1-213ENST00000585294 USP19O94966 1318 aa18.21■□□□□ 0.51
CUEDC1-213ENST00000585294 SPATA31A1Q5TZJ5 1347 aa18.21■□□□□ 0.51
CUEDC1-213ENST00000585294 TRPM1Q7Z4N2 1603 aa18.2■□□□□ 0.5
CUEDC1-213ENST00000585294 GCP02774 474 aa18.2■□□□□ 0.5
CUEDC1-213ENST00000585294 NLRP13Q86W25 1043 aa18.2■□□□□ 0.5
CUEDC1-213ENST00000585294 EVC2Q86UK5 1308 aa18.2■□□□□ 0.5
CUEDC1-213ENST00000585294 PHRF1Q9P1Y6 1649 aaKnown RBP18.2■□□□□ 0.5
CUEDC1-213ENST00000585294 EVA1CP58658 441 aa18.19■□□□□ 0.5
CUEDC1-213ENST00000585294 SF3B2Q13435 895 aaKnown RBP18.19■□□□□ 0.5
CUEDC1-213ENST00000585294 USP35Q9P2H5 1018 aa18.19■□□□□ 0.5
CUEDC1-213ENST00000585294 NLRP6P59044 892 aa18.18■□□□□ 0.5
CUEDC1-213ENST00000585294 LARP1Q6PKG0 1096 aaKnown RBP18.18■□□□□ 0.5
CUEDC1-213ENST00000585294 USP6P35125 1406 aa18.17■□□□□ 0.5
CUEDC1-213ENST00000585294 CAMTA1Q9Y6Y1 1673 aa18.17■□□□□ 0.5
CUEDC1-213ENST00000585294 NRKQ7Z2Y5 1582 aa18.16■□□□□ 0.5
CUEDC1-213ENST00000585294 CPDO75976 1380 aa18.16■□□□□ 0.5
CUEDC1-213ENST00000585294 SSH2Q76I76 1423 aa18.15■□□□□ 0.5
CUEDC1-213ENST00000585294 ZBTB7CA1YPR0 619 aa18.15■□□□□ 0.5
CUEDC1-213ENST00000585294 THSD7AQ9UPZ6 1657 aa18.13■□□□□ 0.49
CUEDC1-213ENST00000585294 CARD11Q9BXL7 1154 aa18.13■□□□□ 0.49
CUEDC1-213ENST00000585294 BRD4O60885 1362 aaPredicted RBP18.13■□□□□ 0.49
CUEDC1-213ENST00000585294 EN1Q05925 392 aaPredicted RBP18.12■□□□□ 0.49
CUEDC1-213ENST00000585294 TTC21BQ7Z4L5 1316 aa18.12■□□□□ 0.49
CUEDC1-213ENST00000585294 BAG6P46379 1132 aa18.11■□□□□ 0.49
CUEDC1-213ENST00000585294 BARGINQ6ZT62 677 aa18.11■□□□□ 0.49
CUEDC1-213ENST00000585294 ZNF692Q9BU19 519 aaPredicted RBP18.11■□□□□ 0.49
CUEDC1-213ENST00000585294 LMO7Q8WWI1 1683 aa18.1■□□□□ 0.49
CUEDC1-213ENST00000585294 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
CUEDC1-213ENST00000585294 TONSLQ96HA7 1378 aa18.09■□□□□ 0.49
CUEDC1-213ENST00000585294 SOX12O15370 315 aa18.09■□□□□ 0.49
CUEDC1-213ENST00000585294 TRIM37O94972 964 aa18.09■□□□□ 0.49
CUEDC1-213ENST00000585294 AXIN2Q9Y2T1 843 aa18.09■□□□□ 0.49
CUEDC1-213ENST00000585294 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
CUEDC1-213ENST00000585294 FAM196AQ6ZSG2 479 aa18.08■□□□□ 0.48
CUEDC1-213ENST00000585294 SLIT3O75094 1523 aa18.08■□□□□ 0.48
CUEDC1-213ENST00000585294 COL5A2P05997 1499 aaPredicted RBP18.07■□□□□ 0.48
CUEDC1-213ENST00000585294 CPSF1Q10570 1443 aaKnown RBP18.07■□□□□ 0.48
CUEDC1-213ENST00000585294 AATKQ6ZMQ8 1374 aa18.07■□□□□ 0.48
CUEDC1-213ENST00000585294 PIK3C2AO00443 1686 aa18.07■□□□□ 0.48
CUEDC1-213ENST00000585294 PSDA5PKW4 1024 aaPredicted RBP18.07■□□□□ 0.48
CUEDC1-213ENST00000585294 PDE3BQ13370 1112 aa18.07■□□□□ 0.48
CUEDC1-213ENST00000585294 SRCAPQ6ZRS2 3230 aa18.06■□□□□ 0.48
CUEDC1-213ENST00000585294 KTN1Q86UP2 1357 aaKnown RBP18.06■□□□□ 0.48
CUEDC1-213ENST00000585294 EZH2Q15910 746 aaKnown RBP18.05■□□□□ 0.48
CUEDC1-213ENST00000585294 ARHGEF25Q86VW2 580 aa18.05■□□□□ 0.48
CUEDC1-213ENST00000585294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.05■□□□□ 0.48
CUEDC1-213ENST00000585294 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
CUEDC1-213ENST00000585294 SLC12A5Q9H2X9 1139 aa18.05■□□□□ 0.48
CUEDC1-213ENST00000585294 THRAP3Q9Y2W1 955 aaKnown RBP18.04■□□□□ 0.48
CUEDC1-213ENST00000585294 SBNO2Q9Y2G9 1366 aa18.04■□□□□ 0.48
CUEDC1-213ENST00000585294 TTC21AQ8NDW8 1320 aa18.03■□□□□ 0.48
CUEDC1-213ENST00000585294 TOM1L2Q6ZVM7 507 aa18.03■□□□□ 0.48
CUEDC1-213ENST00000585294 CAMKK2Q96RR4 588 aa18.03■□□□□ 0.48
CUEDC1-213ENST00000585294 CRB1P82279 1406 aa18.03■□□□□ 0.48
CUEDC1-213ENST00000585294 APBA3O96018 575 aa18.02■□□□□ 0.48
CUEDC1-213ENST00000585294 NME9Q86XW9 330 aa18.02■□□□□ 0.48
CUEDC1-213ENST00000585294 KCNH5Q8NCM2 988 aa18.02■□□□□ 0.48
CUEDC1-213ENST00000585294 CD163L1Q9NR16 1453 aa18.01■□□□□ 0.47
CUEDC1-213ENST00000585294 COL18A1P39060 1754 aa18.01■□□□□ 0.47
CUEDC1-213ENST00000585294 AKAP12Q02952 1782 aa18.01■□□□□ 0.47
CUEDC1-213ENST00000585294 RGPD1P0DJD0 1748 aa18.01■□□□□ 0.47
CUEDC1-213ENST00000585294 DISP2A7MBM2 1401 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms