RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 TNS3Q68CZ2 1445 aa19.13■□□□□ 0.65
SREBF1-223ENST00000584760 TONSLQ96HA7 1378 aa19.12■□□□□ 0.65
SREBF1-223ENST00000584760 A0A0G2JS52 829 aa19.12■□□□□ 0.65
SREBF1-223ENST00000584760 ONECUT3O60422 494 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-223ENST00000584760 MYT1Q01538 1121 aa19.12■□□□□ 0.65
SREBF1-223ENST00000584760 ROCK2O75116 1388 aaKnown RBP19.11■□□□□ 0.65
SREBF1-223ENST00000584760 GPRASP1Q5JY77 1395 aa19.11■□□□□ 0.65
SREBF1-223ENST00000584760 SBNO1A3KN83 1393 aa19.1■□□□□ 0.65
SREBF1-223ENST00000584760 CENPJQ9HC77 1338 aaPredicted RBP19.1■□□□□ 0.65
SREBF1-223ENST00000584760 BRWD3Q6RI45 1802 aa19.1■□□□□ 0.65
SREBF1-223ENST00000584760 FAM83GA6ND36 823 aa19.1■□□□□ 0.65
SREBF1-223ENST00000584760 NBPF8Q3BBV2 869 aa19.1■□□□□ 0.65
SREBF1-223ENST00000584760 CRYBG1Q9Y4K1 1723 aa19.09■□□□□ 0.65
SREBF1-223ENST00000584760 PSDA5PKW4 1024 aaPredicted RBP19.09■□□□□ 0.65
SREBF1-223ENST00000584760 PMFBP1Q8TBY8 1022 aa19.09■□□□□ 0.65
SREBF1-223ENST00000584760 BAG6P46379 1132 aa19.07■□□□□ 0.64
SREBF1-223ENST00000584760 FAM98CQ17RN3 349 aaKnown RBP19.07■□□□□ 0.64
SREBF1-223ENST00000584760 ARHGEF10O15013 1369 aa19.06■□□□□ 0.64
SREBF1-223ENST00000584760 NUDT16Q96DE0 195 aaKnown RBP19.06■□□□□ 0.64
SREBF1-223ENST00000584760 CDK19Q9BWU1 502 aa19.06■□□□□ 0.64
SREBF1-223ENST00000584760 BTG4Q9NY30 223 aa19.05■□□□□ 0.64
SREBF1-223ENST00000584760 PLCH1Q4KWH8 1693 aa19.04■□□□□ 0.64
SREBF1-223ENST00000584760 POLR3AO14802 1390 aaPredicted RBP19.03■□□□□ 0.64
SREBF1-223ENST00000584760 EN1Q05925 392 aaPredicted RBP19.02■□□□□ 0.64
SREBF1-223ENST00000584760 FAM182BQ5T319 152 aa19.02■□□□□ 0.64
SREBF1-223ENST00000584760 NWD2Q9ULI1 1742 aa19.02■□□□□ 0.63
SREBF1-223ENST00000584760 PHRF1Q9P1Y6 1649 aaKnown RBP19■□□□□ 0.63
SREBF1-223ENST00000584760 NGDNQ8NEJ9 315 aaKnown RBP19■□□□□ 0.63
SREBF1-223ENST00000584760 PCGF6Q9BYE7 350 aa19■□□□□ 0.63
SREBF1-223ENST00000584760 CCDC61Q9Y6R9 512 aa19■□□□□ 0.63
SREBF1-223ENST00000584760 SBNO2Q9Y2G9 1366 aa19■□□□□ 0.63
SREBF1-223ENST00000584760 PPIP5K1Q6PFW1 1433 aa19■□□□□ 0.63
SREBF1-223ENST00000584760 PLEKHG3A1L390 1219 aa18.98■□□□□ 0.63
SREBF1-223ENST00000584760 SRPK2P78362 688 aaKnown RBP18.98■□□□□ 0.63
SREBF1-223ENST00000584760 LRP5O75197 1615 aa18.98■□□□□ 0.63
SREBF1-223ENST00000584760 AKAP12Q02952 1782 aa18.98■□□□□ 0.63
SREBF1-223ENST00000584760 R3HDM1Q15032 1099 aaKnown RBP18.97■□□□□ 0.63
SREBF1-223ENST00000584760 CABP2Q9NPB3 220 aa18.97■□□□□ 0.63
SREBF1-223ENST00000584760 ACEP12821 1306 aa18.97■□□□□ 0.63
SREBF1-223ENST00000584760 NRAPQ86VF7 1730 aa18.97■□□□□ 0.63
SREBF1-223ENST00000584760 CARD11Q9BXL7 1154 aa18.96■□□□□ 0.63
SREBF1-223ENST00000584760 SPATA31A5Q5VU36 1347 aa18.96■□□□□ 0.63
SREBF1-223ENST00000584760 EVC2Q86UK5 1308 aa18.96■□□□□ 0.63
SREBF1-223ENST00000584760 SPATA31A7Q8IWB4 1347 aa18.96■□□□□ 0.63
SREBF1-223ENST00000584760 CLSPNQ9HAW4 1339 aa18.96■□□□□ 0.63
SREBF1-223ENST00000584760 PAK3O75914 559 aaPredicted RBP18.95■□□□□ 0.62
SREBF1-223ENST00000584760 COL14A1Q05707 1796 aaKnown RBP18.94■□□□□ 0.62
SREBF1-223ENST00000584760 NRKQ7Z2Y5 1582 aa18.93■□□□□ 0.62
SREBF1-223ENST00000584760 PRDM11Q9NQV5 511 aa18.93■□□□□ 0.62
SREBF1-223ENST00000584760 MON2Q7Z3U7 1717 aa18.92■□□□□ 0.62
SREBF1-223ENST00000584760 EZH2Q15910 746 aaKnown RBP18.92■□□□□ 0.62
SREBF1-223ENST00000584760 PIK3C2AO00443 1686 aa18.91■□□□□ 0.62
SREBF1-223ENST00000584760 USP6P35125 1406 aa18.91■□□□□ 0.62
SREBF1-223ENST00000584760 TRIM37O94972 964 aa18.89■□□□□ 0.61
SREBF1-223ENST00000584760 CHRNA2Q15822 529 aa18.89■□□□□ 0.61
SREBF1-223ENST00000584760 STRN4Q9NRL3 753 aa18.89■□□□□ 0.61
SREBF1-223ENST00000584760 BRD4O60885 1362 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-223ENST00000584760 SSH2Q76I76 1423 aa18.89■□□□□ 0.61
SREBF1-223ENST00000584760 CABP1Q9NZU7 370 aa18.88■□□□□ 0.61
SREBF1-223ENST00000584760 RGPD1P0DJD0 1748 aa18.87■□□□□ 0.61
SREBF1-223ENST00000584760 SPATA31A1Q5TZJ5 1347 aa18.87■□□□□ 0.61
SREBF1-223ENST00000584760 FAM196AQ6ZSG2 479 aa18.87■□□□□ 0.61
SREBF1-223ENST00000584760 CAMKK2Q96RR4 588 aa18.87■□□□□ 0.61
SREBF1-223ENST00000584760 DISP2A7MBM2 1401 aa18.86■□□□□ 0.61
SREBF1-223ENST00000584760 KIAA0232Q92628 1395 aa18.86■□□□□ 0.61
SREBF1-223ENST00000584760 APBA3O96018 575 aa18.86■□□□□ 0.61
SREBF1-223ENST00000584760 ZC3H6P61129 1189 aaKnown RBP18.86■□□□□ 0.61
SREBF1-223ENST00000584760 NUTM2GQ5VZR2 741 aa18.86■□□□□ 0.61
SREBF1-223ENST00000584760 USP35Q9P2H5 1018 aa18.86■□□□□ 0.61
SREBF1-223ENST00000584760 TIMELESSQ9UNS1 1208 aa18.86■□□□□ 0.61
SREBF1-223ENST00000584760 CPSF1Q10570 1443 aaKnown RBP18.85■□□□□ 0.61
SREBF1-223ENST00000584760 USP19O94966 1318 aa18.85■□□□□ 0.61
SREBF1-223ENST00000584760 SLIT3O75094 1523 aa18.84■□□□□ 0.61
SREBF1-223ENST00000584760 LMO7Q8WWI1 1683 aa18.84■□□□□ 0.61
SREBF1-223ENST00000584760 THSD7AQ9UPZ6 1657 aa18.84■□□□□ 0.61
SREBF1-223ENST00000584760 CD163L1Q9NR16 1453 aa18.84■□□□□ 0.61
SREBF1-223ENST00000584760 USP54Q70EL1 1684 aa18.83■□□□□ 0.61
SREBF1-223ENST00000584760 EVA1CP58658 441 aa18.83■□□□□ 0.6
SREBF1-223ENST00000584760 ABTB2Q8N961 1025 aa18.83■□□□□ 0.6
SREBF1-223ENST00000584760 TESK2Q96S53 571 aa18.83■□□□□ 0.6
SREBF1-223ENST00000584760 USP47Q96K76 1375 aa18.82■□□□□ 0.6
SREBF1-223ENST00000584760 ST20-MTHFSA0A0A6YYL1 179 aa18.81■□□□□ 0.6
SREBF1-223ENST00000584760 PDE3BQ13370 1112 aa18.81■□□□□ 0.6
SREBF1-223ENST00000584760 TNS1Q9HBL0 1735 aaKnown RBP18.8■□□□□ 0.6
SREBF1-223ENST00000584760 CCER1Q8TC90 406 aaPredicted RBP18.79■□□□□ 0.6
SREBF1-223ENST00000584760 CPDO75976 1380 aa18.79■□□□□ 0.6
SREBF1-223ENST00000584760 PUS7Q96PZ0 661 aaKnown RBP18.78■□□□□ 0.6
SREBF1-223ENST00000584760 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
SREBF1-223ENST00000584760 NBPF14Q5TI25 921 aa18.77■□□□□ 0.6
SREBF1-223ENST00000584760 LARP1Q6PKG0 1096 aaKnown RBP18.77■□□□□ 0.6
SREBF1-223ENST00000584760 BARGINQ6ZT62 677 aa18.77■□□□□ 0.6
SREBF1-223ENST00000584760 NLRP13Q86W25 1043 aa18.77■□□□□ 0.6
SREBF1-223ENST00000584760 ZNF692Q9BU19 519 aaPredicted RBP18.77■□□□□ 0.6
SREBF1-223ENST00000584760 PARD3Q8TEW0 1356 aa18.77■□□□□ 0.6
SREBF1-223ENST00000584760 TTC21BQ7Z4L5 1316 aa18.76■□□□□ 0.59
SREBF1-223ENST00000584760 CAMTA1Q9Y6Y1 1673 aa18.76■□□□□ 0.59
SREBF1-223ENST00000584760 COL18A1P39060 1754 aa18.76■□□□□ 0.59
SREBF1-223ENST00000584760 TTC21AQ8NDW8 1320 aa18.75■□□□□ 0.59
SREBF1-223ENST00000584760 TCP11L2Q8N4U5 519 aa18.75■□□□□ 0.59
SREBF1-223ENST00000584760 NFAT5O94916 1531 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms