RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 BTG4Q9NY30 223 aa24.31■■□□□ 1.48
CCDC57-219ENST00000584717 COL14A1Q05707 1796 aaKnown RBP24.31■■□□□ 1.48
CCDC57-219ENST00000584717 NGDNQ8NEJ9 315 aaKnown RBP24.3■■□□□ 1.48
CCDC57-219ENST00000584717 CRYBG1Q9Y4K1 1723 aa24.3■■□□□ 1.48
CCDC57-219ENST00000584717 FAM98CQ17RN3 349 aaKnown RBP24.29■■□□□ 1.48
CCDC57-219ENST00000584717 PAK3O75914 559 aaPredicted RBP24.28■■□□□ 1.48
CCDC57-219ENST00000584717 ITSN1Q15811 1721 aa24.27■■□□□ 1.48
CCDC57-219ENST00000584717 ATP7BP35670 1465 aa24.26■■□□□ 1.47
CCDC57-219ENST00000584717 STAC3Q96MF2 364 aa24.25■■□□□ 1.47
CCDC57-219ENST00000584717 NUDT16Q96DE0 195 aaKnown RBP24.23■■□□□ 1.47
CCDC57-219ENST00000584717 PRDM11Q9NQV5 511 aa24.21■■□□□ 1.47
CCDC57-219ENST00000584717 PHRF1Q9P1Y6 1649 aaKnown RBP24.21■■□□□ 1.47
CCDC57-219ENST00000584717 SPATA31A5Q5VU36 1347 aa24.2■■□□□ 1.46
CCDC57-219ENST00000584717 SPATA31A7Q8IWB4 1347 aa24.2■■□□□ 1.46
CCDC57-219ENST00000584717 HRCP23327 699 aa24.19■■□□□ 1.46
CCDC57-219ENST00000584717 FAM182BQ5T319 152 aa24.19■■□□□ 1.46
CCDC57-219ENST00000584717 CDK19Q9BWU1 502 aa24.18■■□□□ 1.46
CCDC57-219ENST00000584717 TOPAZ1Q8N9V7 1692 aa24.18■■□□□ 1.46
CCDC57-219ENST00000584717 THSD7AQ9UPZ6 1657 aa24.18■■□□□ 1.46
CCDC57-219ENST00000584717 KIAA0232Q92628 1395 aa24.17■■□□□ 1.46
CCDC57-219ENST00000584717 BAG6P46379 1132 aa24.17■■□□□ 1.46
CCDC57-219ENST00000584717 CHRNA2Q15822 529 aa24.16■■□□□ 1.46
CCDC57-219ENST00000584717 NUTM2GQ5VZR2 741 aa24.16■■□□□ 1.46
CCDC57-219ENST00000584717 RGPD1P0DJD0 1748 aa24.15■■□□□ 1.46
CCDC57-219ENST00000584717 KIAA1210Q9ULL0 1709 aa24.15■■□□□ 1.46
CCDC57-219ENST00000584717 PSDA5PKW4 1024 aaPredicted RBP24.13■■□□□ 1.45
CCDC57-219ENST00000584717 ZC3H6P61129 1189 aaKnown RBP24.13■■□□□ 1.45
CCDC57-219ENST00000584717 STRN4Q9NRL3 753 aa24.13■■□□□ 1.45
CCDC57-219ENST00000584717 ACEP12821 1306 aa24.12■■□□□ 1.45
CCDC57-219ENST00000584717 POLR3AO14802 1390 aaPredicted RBP24.12■■□□□ 1.45
CCDC57-219ENST00000584717 SPATA31A1Q5TZJ5 1347 aa24.11■■□□□ 1.45
CCDC57-219ENST00000584717 EN1Q05925 392 aaPredicted RBP24.11■■□□□ 1.45
CCDC57-219ENST00000584717 LRP5O75197 1615 aa24.1■■□□□ 1.45
CCDC57-219ENST00000584717 TNS1Q9HBL0 1735 aaKnown RBP24.1■■□□□ 1.45
CCDC57-219ENST00000584717 NBPF8Q3BBV2 869 aa24.1■■□□□ 1.45
CCDC57-219ENST00000584717 CCDC61Q9Y6R9 512 aa24.1■■□□□ 1.45
CCDC57-219ENST00000584717 NRKQ7Z2Y5 1582 aa24.09■■□□□ 1.45
CCDC57-219ENST00000584717 NBPF1Q3BBV0 1214 aa24.09■■□□□ 1.45
CCDC57-219ENST00000584717 PLEKHG3A1L390 1219 aa24.07■■□□□ 1.44
CCDC57-219ENST00000584717 USP35Q9P2H5 1018 aa24.06■■□□□ 1.44
CCDC57-219ENST00000584717 ABTB2Q8N961 1025 aa24.05■■□□□ 1.44
CCDC57-219ENST00000584717 SSH2Q76I76 1423 aa24.04■■□□□ 1.44
CCDC57-219ENST00000584717 SRPK2P78362 688 aaKnown RBP24.04■■□□□ 1.44
CCDC57-219ENST00000584717 DISP2A7MBM2 1401 aa24.03■■□□□ 1.44
CCDC57-219ENST00000584717 PPIP5K1Q6PFW1 1433 aa24.03■■□□□ 1.44
CCDC57-219ENST00000584717 CAMTA1Q9Y6Y1 1673 aa24.03■■□□□ 1.44
CCDC57-219ENST00000584717 EVA1CP58658 441 aa24.03■■□□□ 1.44
CCDC57-219ENST00000584717 TRIM37O94972 964 aa24.02■■□□□ 1.44
CCDC57-219ENST00000584717 CENPJQ9HC77 1338 aaPredicted RBP24.02■■□□□ 1.44
CCDC57-219ENST00000584717 LMO7Q8WWI1 1683 aa24.02■■□□□ 1.44
CCDC57-219ENST00000584717 QRICH2Q9H0J4 1663 aa24.02■■□□□ 1.44
CCDC57-219ENST00000584717 R3HDM1Q15032 1099 aaKnown RBP24.01■■□□□ 1.43
CCDC57-219ENST00000584717 EZH2Q15910 746 aaKnown RBP24.01■■□□□ 1.43
CCDC57-219ENST00000584717 CABP2Q9NPB3 220 aa24.01■■□□□ 1.43
CCDC57-219ENST00000584717 USP19O94966 1318 aa24.01■■□□□ 1.43
CCDC57-219ENST00000584717 LARP1Q6PKG0 1096 aaKnown RBP24■■□□□ 1.43
CCDC57-219ENST00000584717 FAM196AQ6ZSG2 479 aa24■■□□□ 1.43
CCDC57-219ENST00000584717 CPDO75976 1380 aa24■■□□□ 1.43
CCDC57-219ENST00000584717 BARGINQ6ZT62 677 aa23.97■■□□□ 1.43
CCDC57-219ENST00000584717 NLRP13Q86W25 1043 aa23.97■■□□□ 1.43
CCDC57-219ENST00000584717 GCP02774 474 aa23.96■■□□□ 1.43
CCDC57-219ENST00000584717 PDE3BQ13370 1112 aa23.96■■□□□ 1.43
CCDC57-219ENST00000584717 APBA3O96018 575 aa23.95■■□□□ 1.42
CCDC57-219ENST00000584717 TCP11L2Q8N4U5 519 aa23.95■■□□□ 1.42
CCDC57-219ENST00000584717 CAMKK2Q96RR4 588 aa23.95■■□□□ 1.42
CCDC57-219ENST00000584717 ZBTB7CA1YPR0 619 aa23.94■■□□□ 1.42
CCDC57-219ENST00000584717 COL5A2P05997 1499 aaPredicted RBP23.94■■□□□ 1.42
CCDC57-219ENST00000584717 USP6P35125 1406 aa23.93■■□□□ 1.42
CCDC57-219ENST00000584717 CABP1Q9NZU7 370 aa23.92■■□□□ 1.42
CCDC57-219ENST00000584717 RREB1Q92766 1687 aa23.91■■□□□ 1.42
CCDC57-219ENST00000584717 BRD4O60885 1362 aaPredicted RBP23.91■■□□□ 1.42
CCDC57-219ENST00000584717 PARP4Q9UKK3 1724 aaKnown RBP23.9■■□□□ 1.42
CCDC57-219ENST00000584717 L3MBTL2Q969R5 705 aa23.9■■□□□ 1.42
CCDC57-219ENST00000584717 PARD3Q8TEW0 1356 aa23.9■■□□□ 1.42
CCDC57-219ENST00000584717 NLRP6P59044 892 aa23.89■■□□□ 1.41
CCDC57-219ENST00000584717 THRAP3Q9Y2W1 955 aaKnown RBP23.89■■□□□ 1.41
CCDC57-219ENST00000584717 NUP188Q5SRE5 1749 aa23.89■■□□□ 1.41
CCDC57-219ENST00000584717 SLIT3O75094 1523 aa23.89■■□□□ 1.41
CCDC57-219ENST00000584717 TRPM1Q7Z4N2 1603 aa23.88■■□□□ 1.41
CCDC57-219ENST00000584717 PIK3C2AO00443 1686 aa23.88■■□□□ 1.41
CCDC57-219ENST00000584717 CRB1P82279 1406 aa23.87■■□□□ 1.41
CCDC57-219ENST00000584717 EVC2Q86UK5 1308 aa23.84■■□□□ 1.41
CCDC57-219ENST00000584717 AATKQ6ZMQ8 1374 aa23.84■■□□□ 1.41
CCDC57-219ENST00000584717 SIN3AQ96ST3 1273 aa23.84■■□□□ 1.41
CCDC57-219ENST00000584717 LRRC37A3O60309 1634 aa23.84■■□□□ 1.41
CCDC57-219ENST00000584717 COL18A1P39060 1754 aa23.83■■□□□ 1.4
CCDC57-219ENST00000584717 PEAK1Q9H792 1746 aa23.81■■□□□ 1.4
CCDC57-219ENST00000584717 OVOS2A0A0G2JMS6 1433 aa23.81■■□□□ 1.4
CCDC57-219ENST00000584717 OVOS2A0A0J9YW53 1432 aa23.81■■□□□ 1.4
CCDC57-219ENST00000584717 OVOS2Q6IE36 1432 aa23.81■■□□□ 1.4
CCDC57-219ENST00000584717 ROCK2O75116 1388 aaKnown RBP23.8■■□□□ 1.4
CCDC57-219ENST00000584717 TOM1L2Q6ZVM7 507 aa23.8■■□□□ 1.4
CCDC57-219ENST00000584717 AKAP12Q02952 1782 aa23.8■■□□□ 1.4
CCDC57-219ENST00000584717 WNK3Q9BYP7 1800 aa23.8■■□□□ 1.4
CCDC57-219ENST00000584717 CPSF1Q10570 1443 aaKnown RBP23.79■■□□□ 1.4
CCDC57-219ENST00000584717 NEUROD1Q13562 356 aa23.79■■□□□ 1.4
CCDC57-219ENST00000584717 NBPF14Q5TI25 921 aa23.79■■□□□ 1.4
CCDC57-219ENST00000584717 SOX12O15370 315 aa23.78■■□□□ 1.4
CCDC57-219ENST00000584717 AXIN2Q9Y2T1 843 aa23.78■■□□□ 1.4
CCDC57-219ENST00000584717 TTC21BQ7Z4L5 1316 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms