RNA–Protein interactions for RNA: ENST00000584669.5

TOP3A-218, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-218ENST00000584669 PAK3O75914 559 aaPredicted RBP29.6■■■□□ 2.33
TOP3A-218ENST00000584669 NUDT16Q96DE0 195 aaKnown RBP29.59■■■□□ 2.33
TOP3A-218ENST00000584669 GLI3P10071 1580 aa29.58■■■□□ 2.33
TOP3A-218ENST00000584669 PLCH1Q4KWH8 1693 aa29.58■■■□□ 2.33
TOP3A-218ENST00000584669 FAM83GA6ND36 823 aa29.55■■■□□ 2.32
TOP3A-218ENST00000584669 ALS2Q96Q42 1657 aa29.54■■■□□ 2.32
TOP3A-218ENST00000584669 VPS72Q15906 364 aa29.54■■■□□ 2.32
TOP3A-218ENST00000584669 CARD11Q9BXL7 1154 aa29.54■■■□□ 2.32
TOP3A-218ENST00000584669 CLSPNQ9HAW4 1339 aa29.53■■■□□ 2.32
TOP3A-218ENST00000584669 NWD2Q9ULI1 1742 aa29.53■■■□□ 2.32
TOP3A-218ENST00000584669 SRPK2P78362 688 aaKnown RBP29.52■■■□□ 2.32
TOP3A-218ENST00000584669 CABP2Q9NPB3 220 aa29.51■■■□□ 2.31
TOP3A-218ENST00000584669 SEPT12Q8IYM1 358 aa29.49■■■□□ 2.31
TOP3A-218ENST00000584669 CCDC61Q9Y6R9 512 aa29.49■■■□□ 2.31
TOP3A-218ENST00000584669 A0A0G2JS52 829 aa29.48■■■□□ 2.31
TOP3A-218ENST00000584669 MYT1Q01538 1121 aa29.48■■■□□ 2.31
TOP3A-218ENST00000584669 BTG4Q9NY30 223 aa29.48■■■□□ 2.31
TOP3A-218ENST00000584669 CCER1Q8TC90 406 aaPredicted RBP29.47■■■□□ 2.31
TOP3A-218ENST00000584669 EVC2Q86UK5 1308 aa29.45■■■□□ 2.31
TOP3A-218ENST00000584669 PPIP5K1Q6PFW1 1433 aa29.45■■■□□ 2.31
TOP3A-218ENST00000584669 PRDM11Q9NQV5 511 aa29.45■■■□□ 2.31
TOP3A-218ENST00000584669 POLR3AO14802 1390 aaPredicted RBP29.44■■■□□ 2.3
TOP3A-218ENST00000584669 BRWD3Q6RI45 1802 aa29.44■■■□□ 2.3
TOP3A-218ENST00000584669 NUTM2GQ5VZR2 741 aa29.44■■■□□ 2.3
TOP3A-218ENST00000584669 CRYBG1Q9Y4K1 1723 aa29.44■■■□□ 2.3
TOP3A-218ENST00000584669 COL14A1Q05707 1796 aaKnown RBP29.44■■■□□ 2.3
TOP3A-218ENST00000584669 ACEP12821 1306 aa29.44■■■□□ 2.3
TOP3A-218ENST00000584669 PLEKHG3A1L390 1219 aa29.43■■■□□ 2.3
TOP3A-218ENST00000584669 CCDC125Q86Z20 511 aa29.43■■■□□ 2.3
TOP3A-218ENST00000584669 NRAPQ86VF7 1730 aa29.42■■■□□ 2.3
TOP3A-218ENST00000584669 SBNO2Q9Y2G9 1366 aa29.4■■■□□ 2.3
TOP3A-218ENST00000584669 FAM98CQ17RN3 349 aaKnown RBP29.39■■■□□ 2.3
TOP3A-218ENST00000584669 TIMELESSQ9UNS1 1208 aa29.39■■■□□ 2.3
TOP3A-218ENST00000584669 AKAP12Q02952 1782 aa29.39■■■□□ 2.29
TOP3A-218ENST00000584669 KRT27Q7Z3Y8 459 aa29.38■■■□□ 2.29
TOP3A-218ENST00000584669 KIAA0232Q92628 1395 aa29.37■■■□□ 2.29
TOP3A-218ENST00000584669 BLMP54132 1417 aaPredicted RBP29.37■■■□□ 2.29
TOP3A-218ENST00000584669 ONECUT3O60422 494 aaPredicted RBP29.36■■■□□ 2.29
TOP3A-218ENST00000584669 CHRNA2Q15822 529 aa29.36■■■□□ 2.29
TOP3A-218ENST00000584669 CABP1Q9NZU7 370 aa29.36■■■□□ 2.29
TOP3A-218ENST00000584669 EP400Q96L91 3159 aa29.35■■■□□ 2.29
TOP3A-218ENST00000584669 ZC3H6P61129 1189 aaKnown RBP29.35■■■□□ 2.29
TOP3A-218ENST00000584669 SF3B2Q13435 895 aaKnown RBP29.34■■■□□ 2.29
TOP3A-218ENST00000584669 ZRANB1Q9UGI0 708 aa29.34■■■□□ 2.29
TOP3A-218ENST00000584669 PHRF1Q9P1Y6 1649 aaKnown RBP29.34■■■□□ 2.29
TOP3A-218ENST00000584669 ABTB2Q8N961 1025 aa29.33■■■□□ 2.29
TOP3A-218ENST00000584669 SPATA31A5Q5VU36 1347 aa29.32■■■□□ 2.28
TOP3A-218ENST00000584669 SPATA31A7Q8IWB4 1347 aa29.32■■■□□ 2.28
TOP3A-218ENST00000584669 STRN4Q9NRL3 753 aa29.32■■■□□ 2.28
TOP3A-218ENST00000584669 ST20-MTHFSA0A0A6YYL1 179 aa29.31■■■□□ 2.28
TOP3A-218ENST00000584669 DEFB132Q7Z7B7 95 aa29.3■■■□□ 2.28
TOP3A-218ENST00000584669 TESK2Q96S53 571 aa29.28■■■□□ 2.28
TOP3A-218ENST00000584669 USP6P35125 1406 aa29.28■■■□□ 2.28
TOP3A-218ENST00000584669 USP47Q96K76 1375 aa29.27■■■□□ 2.28
TOP3A-218ENST00000584669 MON2Q7Z3U7 1717 aa29.27■■■□□ 2.28
TOP3A-218ENST00000584669 NRKQ7Z2Y5 1582 aa29.25■■■□□ 2.27
TOP3A-218ENST00000584669 EVA1CP58658 441 aa29.24■■■□□ 2.27
TOP3A-218ENST00000584669 PIK3C2AO00443 1686 aa29.24■■■□□ 2.27
TOP3A-218ENST00000584669 FAM182BQ5T319 152 aa29.23■■■□□ 2.27
TOP3A-218ENST00000584669 NLRP13Q86W25 1043 aa29.23■■■□□ 2.27
TOP3A-218ENST00000584669 USP19O94966 1318 aa29.22■■■□□ 2.27
TOP3A-218ENST00000584669 SPATA31A1Q5TZJ5 1347 aa29.22■■■□□ 2.27
TOP3A-218ENST00000584669 USP35Q9P2H5 1018 aa29.22■■■□□ 2.27
TOP3A-218ENST00000584669 SSH2Q76I76 1423 aa29.21■■■□□ 2.27
TOP3A-218ENST00000584669 BRD4O60885 1362 aaPredicted RBP29.21■■■□□ 2.27
TOP3A-218ENST00000584669 CPSF1Q10570 1443 aaKnown RBP29.2■■■□□ 2.27
TOP3A-218ENST00000584669 ZBTB7CA1YPR0 619 aa29.2■■■□□ 2.26
TOP3A-218ENST00000584669 THSD7AQ9UPZ6 1657 aa29.19■■■□□ 2.26
TOP3A-218ENST00000584669 CD163L1Q9NR16 1453 aa29.17■■■□□ 2.26
TOP3A-218ENST00000584669 CPDO75976 1380 aa29.17■■■□□ 2.26
TOP3A-218ENST00000584669 GCP02774 474 aa29.17■■■□□ 2.26
TOP3A-218ENST00000584669 BAG6P46379 1132 aa29.17■■■□□ 2.26
TOP3A-218ENST00000584669 NLRP6P59044 892 aa29.16■■■□□ 2.26
TOP3A-218ENST00000584669 TMC1Q8TDI8 760 aa29.16■■■□□ 2.26
TOP3A-218ENST00000584669 ZNF692Q9BU19 519 aaPredicted RBP29.16■■■□□ 2.26
TOP3A-218ENST00000584669 CAMTA1Q9Y6Y1 1673 aa29.15■■■□□ 2.26
TOP3A-218ENST00000584669 KTN1Q86UP2 1357 aaKnown RBP29.15■■■□□ 2.26
TOP3A-218ENST00000584669 SLC12A5Q9H2X9 1139 aa29.15■■■□□ 2.26
TOP3A-218ENST00000584669 LARP1Q6PKG0 1096 aaKnown RBP29.14■■■□□ 2.26
TOP3A-218ENST00000584669 PUS7Q96PZ0 661 aaKnown RBP29.14■■■□□ 2.26
TOP3A-218ENST00000584669 TTC21BQ7Z4L5 1316 aa29.13■■■□□ 2.25
TOP3A-218ENST00000584669 LMO7Q8WWI1 1683 aa29.12■■■□□ 2.25
TOP3A-218ENST00000584669 SLIT3O75094 1523 aa29.1■■■□□ 2.25
TOP3A-218ENST00000584669 SLC24A1O60721 1099 aa29.1■■■□□ 2.25
TOP3A-218ENST00000584669 TMF1P82094 1093 aa29.09■■■□□ 2.25
TOP3A-218ENST00000584669 TCP11L2Q8N4U5 519 aa29.09■■■□□ 2.25
TOP3A-218ENST00000584669 RGPD1P0DJD0 1748 aa29.08■■■□□ 2.25
TOP3A-218ENST00000584669 BARGINQ6ZT62 677 aa29.08■■■□□ 2.25
TOP3A-218ENST00000584669 A0A1W2PP64 1363 aa29.07■■■□□ 2.24
TOP3A-218ENST00000584669 EN1Q05925 392 aaPredicted RBP29.07■■■□□ 2.24
TOP3A-218ENST00000584669 TTC21AQ8NDW8 1320 aa29.07■■■□□ 2.24
TOP3A-218ENST00000584669 USP54Q70EL1 1684 aa29.06■■■□□ 2.24
TOP3A-218ENST00000584669 COL5A2P05997 1499 aaPredicted RBP29.06■■■□□ 2.24
TOP3A-218ENST00000584669 PDE3BQ13370 1112 aa29.06■■■□□ 2.24
TOP3A-218ENST00000584669 HDGFL2Q7Z4V5 671 aaPredicted RBP29.06■■■□□ 2.24
TOP3A-218ENST00000584669 SOX12O15370 315 aa29.05■■■□□ 2.24
TOP3A-218ENST00000584669 FAM196AQ6ZSG2 479 aa29.05■■■□□ 2.24
TOP3A-218ENST00000584669 MYOM1P52179 1685 aa29.05■■■□□ 2.24
TOP3A-218ENST00000584669 TRIM37O94972 964 aa29.04■■■□□ 2.24
TOP3A-218ENST00000584669 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms