RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 PPP1R1BQ9UD71 204 aaPredicted RBP9.73□□□□□ -0.85
CTC1-212ENST00000584439 GOLGB1Q14789 3259 aaKnown RBP9.73□□□□□ -0.85
CTC1-212ENST00000584439 ANKRD30AQ9BXX3 1397 aa9.73□□□□□ -0.85
CTC1-212ENST00000584439 NINLQ9Y2I6 1382 aa9.73□□□□□ -0.85
CTC1-212ENST00000584439 CDC42BPGQ6DT37 1551 aa9.72□□□□□ -0.85
CTC1-212ENST00000584439 TRIM37O94972 964 aa9.72□□□□□ -0.85
CTC1-212ENST00000584439 SPRYD3Q8NCJ5 442 aa9.72□□□□□ -0.85
CTC1-212ENST00000584439 FMN2Q9NZ56 1722 aa9.72□□□□□ -0.85
CTC1-212ENST00000584439 KIF1BO60333 1816 aa9.72□□□□□ -0.85
CTC1-212ENST00000584439 ADGRB2O60241 1585 aa9.71□□□□□ -0.85
CTC1-212ENST00000584439 SBF2Q86WG5 1849 aa9.71□□□□□ -0.85
CTC1-212ENST00000584439 FAM83GA6ND36 823 aa9.71□□□□□ -0.86
CTC1-212ENST00000584439 SPATA31A3Q5VYP0 1347 aa9.71□□□□□ -0.86
CTC1-212ENST00000584439 SPDYE4A6NLX3 237 aa9.7□□□□□ -0.86
CTC1-212ENST00000584439 KCNQ2O43526 872 aa9.7□□□□□ -0.86
CTC1-212ENST00000584439 PDGFDQ9GZP0 370 aaPredicted RBP9.7□□□□□ -0.86
CTC1-212ENST00000584439 SPON1Q9HCB6 807 aa9.7□□□□□ -0.86
CTC1-212ENST00000584439 IFT172Q9UG01 1749 aa9.7□□□□□ -0.86
CTC1-212ENST00000584439 APBA3O96018 575 aa9.69□□□□□ -0.86
CTC1-212ENST00000584439 CLTCL1P53675 1640 aa9.69□□□□□ -0.86
CTC1-212ENST00000584439 KIF1AQ12756 1690 aa9.69□□□□□ -0.86
CTC1-212ENST00000584439 ANKRD50Q9ULJ7 1429 aa9.69□□□□□ -0.86
CTC1-212ENST00000584439 COL14A1Q05707 1796 aaKnown RBP9.68□□□□□ -0.86
CTC1-212ENST00000584439 CRYBG1Q9Y4K1 1723 aa9.68□□□□□ -0.86
CTC1-212ENST00000584439 ZNF326Q5BKZ1 582 aaKnown RBP9.68□□□□□ -0.86
CTC1-212ENST00000584439 PODXL2Q9NZ53 605 aa9.68□□□□□ -0.86
CTC1-212ENST00000584439 U3KPZ7 1027 aaPredicted RBP9.68□□□□□ -0.86
CTC1-212ENST00000584439 SHANK3Q9BYB0 1731 aa9.68□□□□□ -0.86
CTC1-212ENST00000584439 VPS8Q8N3P4 1428 aa9.66□□□□□ -0.86
CTC1-212ENST00000584439 PPLO60437 1756 aa9.66□□□□□ -0.86
CTC1-212ENST00000584439 LOC105371045A0A1W2PR82 267 aa9.66□□□□□ -0.86
CTC1-212ENST00000584439 KRT28Q7Z3Y7 464 aa9.66□□□□□ -0.86
CTC1-212ENST00000584439 PROM2Q8N271 834 aa9.66□□□□□ -0.86
CTC1-212ENST00000584439 NAIPQ13075 1403 aa9.65□□□□□ -0.86
CTC1-212ENST00000584439 TRPM3Q9HCF6 1732 aaPredicted RBP9.65□□□□□ -0.86
CTC1-212ENST00000584439 ECM2O94769 699 aaPredicted RBP9.65□□□□□ -0.86
CTC1-212ENST00000584439 BTG4Q9NY30 223 aa9.65□□□□□ -0.86
CTC1-212ENST00000584439 TNS3Q68CZ2 1445 aa9.65□□□□□ -0.87
CTC1-212ENST00000584439 SPATA31A5Q5VU36 1347 aa9.64□□□□□ -0.87
CTC1-212ENST00000584439 SPATA31A7Q8IWB4 1347 aa9.64□□□□□ -0.87
CTC1-212ENST00000584439 ALS2Q96Q42 1657 aa9.64□□□□□ -0.87
CTC1-212ENST00000584439 HFM1A2PYH4 1435 aa9.64□□□□□ -0.87
CTC1-212ENST00000584439 PRAG1Q86YV5 1406 aa9.64□□□□□ -0.87
CTC1-212ENST00000584439 RGPD3A6NKT7 1758 aaPredicted RBP9.63□□□□□ -0.87
CTC1-212ENST00000584439 RGPD4Q7Z3J3 1758 aa9.63□□□□□ -0.87
CTC1-212ENST00000584439 LRPPRCP42704 1394 aaKnown RBP9.63□□□□□ -0.87
CTC1-212ENST00000584439 PARD3Q8TEW0 1356 aa9.63□□□□□ -0.87
CTC1-212ENST00000584439 GIGYF1O75420 1035 aaPredicted RBP9.62□□□□□ -0.87
CTC1-212ENST00000584439 PTGER2P43116 358 aa9.62□□□□□ -0.87
CTC1-212ENST00000584439 NBPF8Q3BBV2 869 aa9.62□□□□□ -0.87
CTC1-212ENST00000584439 NBPF14Q5TI25 921 aa9.62□□□□□ -0.87
CTC1-212ENST00000584439 WAPLQ7Z5K2 1190 aa9.62□□□□□ -0.87
CTC1-212ENST00000584439 ANO8Q9HCE9 1232 aaPredicted RBP9.62□□□□□ -0.87
CTC1-212ENST00000584439 CCDC144AA2RUR9 1427 aa9.62□□□□□ -0.87
CTC1-212ENST00000584439 ZBTB7AO95365 584 aa9.61□□□□□ -0.87
CTC1-212ENST00000584439 LMOD2Q6P5Q4 547 aa9.61□□□□□ -0.87
CTC1-212ENST00000584439 FAM196AQ6ZSG2 479 aa9.61□□□□□ -0.87
CTC1-212ENST00000584439 SYT17Q9BSW7 474 aa9.61□□□□□ -0.87
CTC1-212ENST00000584439 FHDC1Q9C0D6 1143 aaPredicted RBP9.61□□□□□ -0.87
CTC1-212ENST00000584439 PLEKHH1Q9ULM0 1364 aa9.61□□□□□ -0.87
CTC1-212ENST00000584439 KNDC1Q76NI1 1749 aa9.6□□□□□ -0.87
CTC1-212ENST00000584439 PEAK1Q9H792 1746 aa9.59□□□□□ -0.87
CTC1-212ENST00000584439 SPINK5Q9NQ38 1064 aaPredicted RBP9.58□□□□□ -0.88
CTC1-212ENST00000584439 SPATA31A1Q5TZJ5 1347 aa9.57□□□□□ -0.88
CTC1-212ENST00000584439 TECPR2O15040 1411 aa9.57□□□□□ -0.88
CTC1-212ENST00000584439 DLC1Q96QB1 1528 aa9.57□□□□□ -0.88
CTC1-212ENST00000584439 RGL2O15211 777 aa9.57□□□□□ -0.88
CTC1-212ENST00000584439 PTF1AQ7RTS3 328 aa9.57□□□□□ -0.88
CTC1-212ENST00000584439 STK26Q9P289 416 aa9.57□□□□□ -0.88
CTC1-212ENST00000584439 NUP155O75694 1391 aa9.57□□□□□ -0.88
CTC1-212ENST00000584439 NRXN1Q9ULB1 1477 aa9.57□□□□□ -0.88
CTC1-212ENST00000584439 PHRF1Q9P1Y6 1649 aaKnown RBP9.56□□□□□ -0.88
CTC1-212ENST00000584439 PARP4Q9UKK3 1724 aaKnown RBP9.56□□□□□ -0.88
CTC1-212ENST00000584439 SBNO1A3KN83 1393 aa9.56□□□□□ -0.88
CTC1-212ENST00000584439 PHF8Q9UPP1 1060 aa9.56□□□□□ -0.88
CTC1-212ENST00000584439 PCNTO95613 3336 aa9.55□□□□□ -0.88
CTC1-212ENST00000584439 SGIP1Q9BQI5 828 aa9.55□□□□□ -0.88
CTC1-212ENST00000584439 USP35Q9P2H5 1018 aa9.55□□□□□ -0.88
CTC1-212ENST00000584439 RRBP1Q9P2E9 1410 aaKnown RBP9.55□□□□□ -0.88
CTC1-212ENST00000584439 ARHGEF10O15013 1369 aa9.54□□□□□ -0.88
CTC1-212ENST00000584439 CAPN15O75808 1086 aa9.54□□□□□ -0.88
CTC1-212ENST00000584439 DSG3P32926 999 aa9.54□□□□□ -0.88
CTC1-212ENST00000584439 PSME1Q06323 249 aa9.54□□□□□ -0.88
CTC1-212ENST00000584439 FAM50AQ14320 339 aaKnown RBP9.54□□□□□ -0.88
CTC1-212ENST00000584439 AKAP12Q02952 1782 aa9.54□□□□□ -0.88
CTC1-212ENST00000584439 CHRNA2Q15822 529 aa9.53□□□□□ -0.88
CTC1-212ENST00000584439 PMFBP1Q8TBY8 1022 aa9.53□□□□□ -0.88
CTC1-212ENST00000584439 STRN4Q9NRL3 753 aa9.53□□□□□ -0.88
CTC1-212ENST00000584439 TUBGCP6Q96RT7 1819 aa9.52□□□□□ -0.89
CTC1-212ENST00000584439 WNK3Q9BYP7 1800 aa9.52□□□□□ -0.89
CTC1-212ENST00000584439 TMEM132EQ6IEE7 984 aa9.52□□□□□ -0.89
CTC1-212ENST00000584439 COL24A1Q17RW2 1714 aa9.51□□□□□ -0.89
CTC1-212ENST00000584439 KAT6BQ8WYB5 2073 aa9.51□□□□□ -0.89
CTC1-212ENST00000584439 VGFO15240 615 aaPredicted RBP9.51□□□□□ -0.89
CTC1-212ENST00000584439 PDE3BQ13370 1112 aa9.51□□□□□ -0.89
CTC1-212ENST00000584439 SPOCK2Q92563 424 aa9.51□□□□□ -0.89
CTC1-212ENST00000584439 LRRC37A3O60309 1634 aa9.51□□□□□ -0.89
CTC1-212ENST00000584439 HSPA6P17066 643 aa9.5□□□□□ -0.89
CTC1-212ENST00000584439 GPR162Q16538 588 aa9.5□□□□□ -0.89
CTC1-212ENST00000584439 ADGRF5Q8IZF2 1346 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms