RNA–Protein interactions for RNA: ENST00000584130.1

RIOK3-209, Transcript of RIO kinase 3, humanhuman

TSL 4

Gene RIOK3, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-209ENST00000584130 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
RIOK3-209ENST00000584130 DACH1Q9UI36 760 aa9.98□□□□□ -0.81
RIOK3-209ENST00000584130 HPS1Q92902 700 aa9.97□□□□□ -0.81
RIOK3-209ENST00000584130 ZNF775Q96BV0 537 aaPredicted RBP9.97□□□□□ -0.81
RIOK3-209ENST00000584130 SIAH2O43255 324 aa9.96□□□□□ -0.82
RIOK3-209ENST00000584130 ALDH1A1P00352 501 aa9.96□□□□□ -0.82
RIOK3-209ENST00000584130 F12P00748 615 aaPredicted RBP9.96□□□□□ -0.82
RIOK3-209ENST00000584130 QPCTQ16769 361 aa9.96□□□□□ -0.82
RIOK3-209ENST00000584130 ZNF511Q8NB15 262 aa9.96□□□□□ -0.82
RIOK3-209ENST00000584130 GOPCQ9HD26 462 aa9.96□□□□□ -0.82
RIOK3-209ENST00000584130 CTHP32929 405 aa9.95□□□□□ -0.82
RIOK3-209ENST00000584130 CLK2P49760 499 aaKnown RBP9.95□□□□□ -0.82
RIOK3-209ENST00000584130 SH3D19Q5HYK7 790 aa9.95□□□□□ -0.82
RIOK3-209ENST00000584130 BAP1Q92560 729 aa9.95□□□□□ -0.82
RIOK3-209ENST00000584130 GMPR2Q9P2T1 348 aaKnown RBP9.95□□□□□ -0.82
RIOK3-209ENST00000584130 LILRB3O75022 631 aa9.94□□□□□ -0.82
RIOK3-209ENST00000584130 SKIV2LQ15477 1246 aaKnown RBP9.94□□□□□ -0.82
RIOK3-209ENST00000584130 RSPH6AQ9H0K4 717 aa9.94□□□□□ -0.82
RIOK3-209ENST00000584130 POLR3EQ9NVU0 708 aa9.94□□□□□ -0.82
RIOK3-209ENST00000584130 MAP10Q9P2G4 905 aa9.94□□□□□ -0.82
RIOK3-209ENST00000584130 NUTM2BA6NNL0 878 aaPredicted RBP9.93□□□□□ -0.82
RIOK3-209ENST00000584130 NUTM2EB1AL46 878 aaPredicted RBP9.93□□□□□ -0.82
RIOK3-209ENST00000584130 NUTM2DQ5VT03 806 aaPredicted RBP9.93□□□□□ -0.82
RIOK3-209ENST00000584130 NUTM2AQ8IVF1 878 aaPredicted RBP9.93□□□□□ -0.82
RIOK3-209ENST00000584130 TLL2Q9Y6L7 1015 aa9.93□□□□□ -0.82
RIOK3-209ENST00000584130 PROCA1Q8NCQ7 364 aaPredicted RBP9.92□□□□□ -0.82
RIOK3-209ENST00000584130 TSC1Q92574 1164 aa9.92□□□□□ -0.82
RIOK3-209ENST00000584130 ATP13A2Q9NQ11 1180 aa9.92□□□□□ -0.82
RIOK3-209ENST00000584130 GTF3C3Q9Y5Q9 886 aa9.92□□□□□ -0.82
RIOK3-209ENST00000584130 PER1O15534 1290 aaPredicted RBP9.91□□□□□ -0.82
RIOK3-209ENST00000584130 HELBQ8NG08 1087 aaPredicted RBP9.91□□□□□ -0.82
RIOK3-209ENST00000584130 WASF2Q9Y6W5 498 aa9.91□□□□□ -0.82
RIOK3-209ENST00000584130 VARSP26640 1264 aaKnown RBP9.9□□□□□ -0.82
RIOK3-209ENST00000584130 C11orf95C9JLR9 678 aaPredicted RBP9.89□□□□□ -0.83
RIOK3-209ENST00000584130 PCMTD1Q96MG8 357 aaPredicted RBP9.89□□□□□ -0.83
RIOK3-209ENST00000584130 RTL5Q5HYW3 569 aaPredicted RBP9.88□□□□□ -0.83
RIOK3-209ENST00000584130 FBXO31Q5XUX0 539 aaPredicted RBP9.87□□□□□ -0.83
RIOK3-209ENST00000584130 MPNDQ8N594 471 aa9.87□□□□□ -0.83
RIOK3-209ENST00000584130 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.87□□□□□ -0.83
RIOK3-209ENST00000584130 FAM174AQ8TBP5 190 aa9.86□□□□□ -0.83
RIOK3-209ENST00000584130 TRIM47Q96LD4 638 aa9.86□□□□□ -0.83
RIOK3-209ENST00000584130 SENP2Q9HC62 589 aa9.86□□□□□ -0.83
RIOK3-209ENST00000584130 FOXJ1Q92949 421 aa9.85□□□□□ -0.83
RIOK3-209ENST00000584130 CAPN5O15484 640 aaPredicted RBP9.83□□□□□ -0.84
RIOK3-209ENST00000584130 NNTQ13423 1086 aa9.83□□□□□ -0.84
RIOK3-209ENST00000584130 NBPF14Q5TI25 921 aa9.83□□□□□ -0.84
RIOK3-209ENST00000584130 ARMC2Q8NEN0 867 aa9.83□□□□□ -0.84
RIOK3-209ENST00000584130 KIFC2Q96AC6 838 aa9.83□□□□□ -0.84
RIOK3-209ENST00000584130 ADH1CP00326 375 aa9.82□□□□□ -0.84
RIOK3-209ENST00000584130 BMP1P13497 986 aa9.82□□□□□ -0.84
RIOK3-209ENST00000584130 SNRPBP14678 240 aaKnown RBP9.82□□□□□ -0.84
RIOK3-209ENST00000584130 BPHLQ86WA6 291 aaPredicted RBP9.82□□□□□ -0.84
RIOK3-209ENST00000584130 ATP1B4Q9UN42 357 aaPredicted RBP9.82□□□□□ -0.84
RIOK3-209ENST00000584130 AGERQ15109 404 aa9.81□□□□□ -0.84
RIOK3-209ENST00000584130 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
RIOK3-209ENST00000584130 TREML4Q6UXN2 200 aa9.8□□□□□ -0.84
RIOK3-209ENST00000584130 TRIM46Q7Z4K8 759 aa9.8□□□□□ -0.84
RIOK3-209ENST00000584130 CDK15Q96Q40 435 aa9.8□□□□□ -0.84
RIOK3-209ENST00000584130 LCE2AQ5TA79 106 aaPredicted RBP9.79□□□□□ -0.84
RIOK3-209ENST00000584130 C1QTNF2Q9BXJ5 285 aa9.79□□□□□ -0.84
RIOK3-209ENST00000584130 PPP2R2DQ66LE6 453 aa9.78□□□□□ -0.84
RIOK3-209ENST00000584130 SH3BP5LQ7L8J4 393 aa9.78□□□□□ -0.84
RIOK3-209ENST00000584130 SH3RF1Q7Z6J0 888 aa9.78□□□□□ -0.84
RIOK3-209ENST00000584130 TIMP2P16035 220 aa9.77□□□□□ -0.85
RIOK3-209ENST00000584130 CTDSPL2Q05D32 466 aa9.77□□□□□ -0.85
RIOK3-209ENST00000584130 ARID5BQ14865 1188 aa9.77□□□□□ -0.85
RIOK3-209ENST00000584130 GPKOWQ92917 476 aaPredicted RBP eCLIP9.77□□□□□ -0.854e-6■□□□□ 10.4
RIOK3-209ENST00000584130 WDR4P57081 412 aaKnown RBP9.76□□□□□ -0.85
RIOK3-209ENST00000584130 WFS1O76024 890 aa9.75□□□□□ -0.85
RIOK3-209ENST00000584130 RFC5P40937 340 aa9.75□□□□□ -0.85
RIOK3-209ENST00000584130 NFX1Q12986 1120 aaKnown RBP9.75□□□□□ -0.85
RIOK3-209ENST00000584130 NR5A1Q13285 461 aa9.75□□□□□ -0.85
RIOK3-209ENST00000584130 LRRN4Q8WUT4 740 aa9.75□□□□□ -0.85
RIOK3-209ENST00000584130 MAP4K5Q9Y4K4 846 aa9.75□□□□□ -0.85
RIOK3-209ENST00000584130 MAGEB6P1A0A0J9YX57 407 aa9.74□□□□□ -0.85
RIOK3-209ENST00000584130 NR3C2P08235 984 aa9.74□□□□□ -0.85
RIOK3-209ENST00000584130 TRMT44Q8IYL2 757 aaKnown RBP9.74□□□□□ -0.85
RIOK3-209ENST00000584130 KLF16Q9BXK1 252 aaPredicted RBP9.74□□□□□ -0.85
RIOK3-209ENST00000584130 FSHRP23945 695 aa9.73□□□□□ -0.85
RIOK3-209ENST00000584130 GRM5P41594 1212 aa9.72□□□□□ -0.85
RIOK3-209ENST00000584130 MRPL14Q6P1L8 145 aaKnown RBP9.72□□□□□ -0.85
RIOK3-209ENST00000584130 CARD14Q9BXL6 1004 aa9.72□□□□□ -0.85
RIOK3-209ENST00000584130 FKBPLQ9UIM3 349 aa9.72□□□□□ -0.85
RIOK3-209ENST00000584130 ZIC2O95409 532 aaPredicted RBP9.71□□□□□ -0.86
RIOK3-209ENST00000584130 ZFP42Q96MM3 310 aa9.71□□□□□ -0.86
RIOK3-209ENST00000584130 ZC3H4Q9UPT8 1303 aaKnown RBP9.71□□□□□ -0.86
RIOK3-209ENST00000584130 TERTO14746 1132 aaKnown RBP9.7□□□□□ -0.86
RIOK3-209ENST00000584130 AP1G2O75843 785 aa9.7□□□□□ -0.86
RIOK3-209ENST00000584130 ERFEQ4G0M1 354 aa9.7□□□□□ -0.86
RIOK3-209ENST00000584130 VASH1Q7L8A9 365 aaPredicted RBP9.7□□□□□ -0.86
RIOK3-209ENST00000584130 ITPKCQ96DU7 683 aa9.7□□□□□ -0.86
RIOK3-209ENST00000584130 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
RIOK3-209ENST00000584130 SCARF1Q14162 830 aa9.69□□□□□ -0.86
RIOK3-209ENST00000584130 NR6A1Q15406 480 aa9.69□□□□□ -0.86
RIOK3-209ENST00000584130 TMEM259Q4ZIN3 620 aa9.69□□□□□ -0.86
RIOK3-209ENST00000584130 PDXDC2PQ6P474 469 aa9.69□□□□□ -0.86
RIOK3-209ENST00000584130 ARHGAP9Q9BRR9 750 aa9.69□□□□□ -0.86
RIOK3-209ENST00000584130 TIMELESSQ9UNS1 1208 aa9.69□□□□□ -0.86
RIOK3-209ENST00000584130 USP17L8P0C7I0 530 aa9.68□□□□□ -0.86
RIOK3-209ENST00000584130 PURBQ96QR8 312 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms