RNA–Protein interactions for RNA: ENST00000584095.1

TTC39C-208, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 553 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-208ENST00000584095 KCTD12Q96CX2 325 aaKnown RBP10.45□□□□□ -0.74
TTC39C-208ENST00000584095 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.44□□□□□ -0.74
TTC39C-208ENST00000584095 PALM3A6NDB9 673 aaPredicted RBP10.44□□□□□ -0.74
TTC39C-208ENST00000584095 TLL1O43897 1013 aa10.44□□□□□ -0.74
TTC39C-208ENST00000584095 CCNYL3P0C7X3 344 aa10.44□□□□□ -0.74
TTC39C-208ENST00000584095 MMP16P51512 607 aa10.44□□□□□ -0.74
TTC39C-208ENST00000584095 SRPK2P78362 688 aaKnown RBP10.44□□□□□ -0.74
TTC39C-208ENST00000584095 ZC3H4Q9UPT8 1303 aaKnown RBP10.43□□□□□ -0.74
TTC39C-208ENST00000584095 ZBBXA8MT70 800 aa10.43□□□□□ -0.74
TTC39C-208ENST00000584095 CTHP32929 405 aa10.43□□□□□ -0.74
TTC39C-208ENST00000584095 EIF4G2P78344 907 aaKnown RBP eCLIP10.43□□□□□ -0.74
TTC39C-208ENST00000584095 NUDT12Q9BQG2 462 aa10.42□□□□□ -0.74
TTC39C-208ENST00000584095 POTEMA6NI47 508 aa10.41□□□□□ -0.74
TTC39C-208ENST00000584095 EVA1BQ9NVM1 165 aa10.41□□□□□ -0.74
TTC39C-208ENST00000584095 TFIP11Q9UBB9 837 aaKnown RBP10.41□□□□□ -0.74
TTC39C-208ENST00000584095 ZPR1O75312 459 aa10.4□□□□□ -0.74
TTC39C-208ENST00000584095 LMOD1P29536 600 aaPredicted RBP10.4□□□□□ -0.74
TTC39C-208ENST00000584095 KCNH2Q12809 1159 aa10.4□□□□□ -0.74
TTC39C-208ENST00000584095 NYAP1Q6ZVC0 841 aa10.4□□□□□ -0.74
TTC39C-208ENST00000584095 MTRQ99707 1265 aa10.4□□□□□ -0.74
TTC39C-208ENST00000584095 ACIN1Q9UKV3 1341 aaKnown RBP10.39□□□□□ -0.75
TTC39C-208ENST00000584095 ADH1BP00325 375 aa10.39□□□□□ -0.75
TTC39C-208ENST00000584095 TBC1D9Q6ZT07 1266 aa10.39□□□□□ -0.75
TTC39C-208ENST00000584095 MAFBQ9Y5Q3 323 aaPredicted RBP10.39□□□□□ -0.75
TTC39C-208ENST00000584095 OCSTAMPQ9BR26 566 aa10.37□□□□□ -0.75
TTC39C-208ENST00000584095 ZBTB7CA1YPR0 619 aa10.36□□□□□ -0.75
TTC39C-208ENST00000584095 PIK3CDO00329 1044 aa10.36□□□□□ -0.75
TTC39C-208ENST00000584095 TJAP1Q5JTD0 557 aa10.36□□□□□ -0.75
TTC39C-208ENST00000584095 ARMC2Q8NEN0 867 aa10.36□□□□□ -0.75
TTC39C-208ENST00000584095 ATP9BO43861 1147 aa10.35□□□□□ -0.75
TTC39C-208ENST00000584095 PDXDC2PQ6P474 469 aa10.35□□□□□ -0.75
TTC39C-208ENST00000584095 ZNF516Q92618 1163 aa10.35□□□□□ -0.75
TTC39C-208ENST00000584095 GPKOWQ92917 476 aaPredicted RBP eCLIP10.35□□□□□ -0.75
TTC39C-208ENST00000584095 GPSM3Q9Y4H4 160 aa10.35□□□□□ -0.75
TTC39C-208ENST00000584095 PTPN5P54829 565 aa10.34□□□□□ -0.75
TTC39C-208ENST00000584095 NBPF14Q5TI25 921 aa10.34□□□□□ -0.75
TTC39C-208ENST00000584095 PTK2Q05397 1052 aa10.33□□□□□ -0.76
TTC39C-208ENST00000584095 PTCRAQ6ISU1 281 aaPredicted RBP10.33□□□□□ -0.76
TTC39C-208ENST00000584095 KCTD17Q8N5Z5 321 aa10.33□□□□□ -0.76
TTC39C-208ENST00000584095 UNC93B1Q9H1C4 597 aa10.33□□□□□ -0.76
TTC39C-208ENST00000584095 IL21Q9HBE4 155 aa10.33□□□□□ -0.76
TTC39C-208ENST00000584095 CDCA8Q53HL2 280 aa10.32□□□□□ -0.76
TTC39C-208ENST00000584095 FAM174AQ8TBP5 190 aa10.32□□□□□ -0.76
TTC39C-208ENST00000584095 SLC6A16Q9GZN6 736 aa10.32□□□□□ -0.76
TTC39C-208ENST00000584095 MYT1LQ9UL68 1186 aa10.32□□□□□ -0.76
TTC39C-208ENST00000584095 CSB-PGBD3P0DP91 1061 aa10.31□□□□□ -0.76
TTC39C-208ENST00000584095 AEBP1Q8IUX7 1158 aa10.31□□□□□ -0.76
TTC39C-208ENST00000584095 CCDC24Q8N4L8 307 aa10.31□□□□□ -0.76
TTC39C-208ENST00000584095 NFATC2IPQ8NCF5 419 aa10.31□□□□□ -0.76
TTC39C-208ENST00000584095 USTQ9Y2C2 406 aa10.31□□□□□ -0.76
TTC39C-208ENST00000584095 ATG7O95352 703 aa10.3□□□□□ -0.76
TTC39C-208ENST00000584095 SKIP12755 728 aa10.29□□□□□ -0.76
TTC39C-208ENST00000584095 PDE4CQ08493 712 aa10.29□□□□□ -0.76
TTC39C-208ENST00000584095 SH3BP5LQ7L8J4 393 aa10.29□□□□□ -0.76
TTC39C-208ENST00000584095 CDAN1Q8IWY9 1227 aa10.29□□□□□ -0.76
TTC39C-208ENST00000584095 NKX2-3Q8TAU0 364 aa10.29□□□□□ -0.76
TTC39C-208ENST00000584095 ADAM32Q8TC27 787 aa10.29□□□□□ -0.76
TTC39C-208ENST00000584095 ARHGAP9Q9BRR9 750 aa10.29□□□□□ -0.76
TTC39C-208ENST00000584095 PCDHB9Q9Y5E1 797 aa10.29□□□□□ -0.76
TTC39C-208ENST00000584095 CARNS1A5YM72 827 aa10.28□□□□□ -0.76
TTC39C-208ENST00000584095 USP17L3A6NCW0 530 aa10.28□□□□□ -0.76
TTC39C-208ENST00000584095 USP17L4A6NCW7 530 aa10.28□□□□□ -0.76
TTC39C-208ENST00000584095 USP17L5A8MUK1 530 aa10.28□□□□□ -0.76
TTC39C-208ENST00000584095 S1PR4O95977 384 aa10.28□□□□□ -0.76
TTC39C-208ENST00000584095 KANK4Q5T7N3 995 aaPredicted RBP10.28□□□□□ -0.76
TTC39C-208ENST00000584095 USP17L2Q6R6M4 530 aa10.28□□□□□ -0.76
TTC39C-208ENST00000584095 USP17L1Q7RTZ2 530 aa10.28□□□□□ -0.76
TTC39C-208ENST00000584095 CEP126Q9P2H0 1117 aa10.28□□□□□ -0.76
TTC39C-208ENST00000584095 PLEKHM2Q8IWE5 1019 aa10.27□□□□□ -0.77
TTC39C-208ENST00000584095 POTEGQ6S5H5 508 aa10.26□□□□□ -0.77
TTC39C-208ENST00000584095 PHTF2Q8N3S3 785 aa10.26□□□□□ -0.77
TTC39C-208ENST00000584095 VRTNQ9H8Y1 702 aa10.26□□□□□ -0.77
TTC39C-208ENST00000584095 MCCD1P59942 119 aaPredicted RBP10.25□□□□□ -0.77
TTC39C-208ENST00000584095 SLFNL1Q499Z3 407 aa10.25□□□□□ -0.77
TTC39C-208ENST00000584095 SH3RF1Q7Z6J0 888 aa10.25□□□□□ -0.77
TTC39C-208ENST00000584095 DEPDC4Q8N2C3 294 aa10.25□□□□□ -0.77
TTC39C-208ENST00000584095 ZNF592Q92610 1267 aa10.25□□□□□ -0.77
TTC39C-208ENST00000584095 FCF1Q9Y324 198 aaKnown RBP10.25□□□□□ -0.77
TTC39C-208ENST00000584095 TMEM88BA6NKF7 163 aa10.24□□□□□ -0.77
TTC39C-208ENST00000584095 ZBTB33Q86T24 672 aa10.24□□□□□ -0.77
TTC39C-208ENST00000584095 RNF135Q8IUD6 432 aa10.24□□□□□ -0.77
TTC39C-208ENST00000584095 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
TTC39C-208ENST00000584095 BAP1Q92560 729 aa10.23□□□□□ -0.77
TTC39C-208ENST00000584095 CARD14Q9BXL6 1004 aa10.23□□□□□ -0.77
TTC39C-208ENST00000584095 MAGEB6P1A0A0J9YX57 407 aa10.22□□□□□ -0.77
TTC39C-208ENST00000584095 PLPP7Q8NBV4 271 aa10.22□□□□□ -0.77
TTC39C-208ENST00000584095 FOXJ1Q92949 421 aa10.22□□□□□ -0.77
TTC39C-208ENST00000584095 CHIC2Q9UKJ5 165 aa10.22□□□□□ -0.77
TTC39C-208ENST00000584095 ZMIZ1Q9ULJ6 1067 aa10.22□□□□□ -0.77
TTC39C-208ENST00000584095 BRD1O95696 1058 aa10.21□□□□□ -0.77
TTC39C-208ENST00000584095 NCOA4Q13772 614 aa10.21□□□□□ -0.77
TTC39C-208ENST00000584095 ELOAQ14241 798 aaKnown RBP10.21□□□□□ -0.77
TTC39C-208ENST00000584095 C4orf48Q5BLP8 95 aa10.21□□□□□ -0.77
TTC39C-208ENST00000584095 DZIP3Q86Y13 1208 aaKnown RBP10.21□□□□□ -0.77
TTC39C-208ENST00000584095 ZNF511Q8NB15 262 aa10.21□□□□□ -0.77
TTC39C-208ENST00000584095 ERFEQ4G0M1 354 aa10.2□□□□□ -0.78
TTC39C-208ENST00000584095 TSGA10IPQ3SY00 556 aa10.19□□□□□ -0.78
TTC39C-208ENST00000584095 TRAF7Q6Q0C0 670 aa10.19□□□□□ -0.78
TTC39C-208ENST00000584095 BPHLQ86WA6 291 aaPredicted RBP10.19□□□□□ -0.78
TTC39C-208ENST00000584095 STK32AQ8WU08 396 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms