RNA–Protein interactions for RNA: ENST00000583683.1

NDEL1-217, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 1,802 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-217ENST00000583683 MYBBP1AQ9BQG0 1328 aaKnown RBP24.65■■□□□ 1.54
NDEL1-217ENST00000583683 GGNBP2Q9H3C7 697 aa24.65■■□□□ 1.54
NDEL1-217ENST00000583683 SLAIN2Q9P270 581 aa24.64■■□□□ 1.54
NDEL1-217ENST00000583683 FOXO3O43524 673 aa24.63■■□□□ 1.53
NDEL1-217ENST00000583683 NME9Q86XW9 330 aa24.63■■□□□ 1.53
NDEL1-217ENST00000583683 MORC1Q86VD1 984 aa24.62■■□□□ 1.53
NDEL1-217ENST00000583683 CCDC184Q52MB2 194 aa24.61■■□□□ 1.53
NDEL1-217ENST00000583683 TTC21AQ8NDW8 1320 aa24.61■■□□□ 1.53
NDEL1-217ENST00000583683 PSME1Q06323 249 aa24.6■■□□□ 1.53
NDEL1-217ENST00000583683 BRD4O60885 1362 aaPredicted RBP24.6■■□□□ 1.53
NDEL1-217ENST00000583683 PIK3C2AO00443 1686 aa24.6■■□□□ 1.53
NDEL1-217ENST00000583683 PPP2R1AP30153 589 aa24.58■■□□□ 1.53
NDEL1-217ENST00000583683 BRINP3Q76B58 766 aa24.58■■□□□ 1.53
NDEL1-217ENST00000583683 TRPM3Q9HCF6 1732 aaPredicted RBP24.58■■□□□ 1.53
NDEL1-217ENST00000583683 NLRP13Q86W25 1043 aa24.58■■□□□ 1.53
NDEL1-217ENST00000583683 ZRANB1Q9UGI0 708 aa24.58■■□□□ 1.53
NDEL1-217ENST00000583683 TNNT2P45379 298 aaPredicted RBP24.56■■□□□ 1.52
NDEL1-217ENST00000583683 PELP1Q8IZL8 1130 aaKnown RBP24.56■■□□□ 1.52
NDEL1-217ENST00000583683 XPCQ01831 940 aaPredicted RBP24.55■■□□□ 1.52
NDEL1-217ENST00000583683 OVOS2A0A0J9YW53 1432 aa24.55■■□□□ 1.52
NDEL1-217ENST00000583683 OVOS2Q6IE36 1432 aa24.55■■□□□ 1.52
NDEL1-217ENST00000583683 PAK3O75914 559 aaPredicted RBP24.54■■□□□ 1.52
NDEL1-217ENST00000583683 COG3Q96JB2 828 aa24.54■■□□□ 1.52
NDEL1-217ENST00000583683 MRS2Q9HD23 443 aa24.54■■□□□ 1.52
NDEL1-217ENST00000583683 NPHP3Q7Z494 1330 aa24.54■■□□□ 1.52
NDEL1-217ENST00000583683 USP54Q70EL1 1684 aa24.54■■□□□ 1.52
NDEL1-217ENST00000583683 KRT28Q7Z3Y7 464 aa24.54■■□□□ 1.52
NDEL1-217ENST00000583683 DDX17Q92841 729 aaKnown RBP24.54■■□□□ 1.52
NDEL1-217ENST00000583683 MARF1Q9Y4F3 1742 aaKnown RBP24.53■■□□□ 1.52
NDEL1-217ENST00000583683 USP31Q70CQ4 1352 aa24.53■■□□□ 1.52
NDEL1-217ENST00000583683 PXDNQ92626 1479 aa24.51■■□□□ 1.51
NDEL1-217ENST00000583683 ABTB2Q8N961 1025 aa24.51■■□□□ 1.51
NDEL1-217ENST00000583683 SCAF1Q9H7N4 1312 aaKnown RBP24.5■■□□□ 1.51
NDEL1-217ENST00000583683 NHSL1Q5SYE7 1610 aa24.5■■□□□ 1.51
NDEL1-217ENST00000583683 ALS2Q96Q42 1657 aa24.49■■□□□ 1.51
NDEL1-217ENST00000583683 MAP2P11137 1827 aaKnown RBP24.49■■□□□ 1.51
NDEL1-217ENST00000583683 ROBO1Q9Y6N7 1651 aa24.49■■□□□ 1.51
NDEL1-217ENST00000583683 IQSEC2Q5JU85 1478 aa24.48■■□□□ 1.51
NDEL1-217ENST00000583683 NLRP6P59044 892 aa24.47■■□□□ 1.51
NDEL1-217ENST00000583683 NUTM2GQ5VZR2 741 aa24.47■■□□□ 1.51
NDEL1-217ENST00000583683 SBNO1A3KN83 1393 aa24.46■■□□□ 1.51
NDEL1-217ENST00000583683 FBLN1P23142 703 aa24.46■■□□□ 1.51
NDEL1-217ENST00000583683 AATKQ6ZMQ8 1374 aa24.46■■□□□ 1.51
NDEL1-217ENST00000583683 MTHFSP49914 203 aa24.45■■□□□ 1.5
NDEL1-217ENST00000583683 SOS2Q07890 1332 aaPredicted RBP24.44■■□□□ 1.5
NDEL1-217ENST00000583683 TOM1O60784 492 aa24.43■■□□□ 1.5
NDEL1-217ENST00000583683 PNISRQ8TF01 805 aaKnown RBP24.42■■□□□ 1.5
NDEL1-217ENST00000583683 TNS3Q68CZ2 1445 aa24.42■■□□□ 1.5
NDEL1-217ENST00000583683 CERKQ8TCT0 537 aa24.42■■□□□ 1.5
NDEL1-217ENST00000583683 POLKQ9UBT6 870 aa24.42■■□□□ 1.5
NDEL1-217ENST00000583683 SPATA31A3Q5VYP0 1347 aa24.4■■□□□ 1.5
NDEL1-217ENST00000583683 LMOD2Q6P5Q4 547 aa24.4■■□□□ 1.5
NDEL1-217ENST00000583683 SMG6Q86US8 1419 aaKnown RBP24.4■■□□□ 1.5
NDEL1-217ENST00000583683 AHDC1Q5TGY3 1603 aaPredicted RBP24.39■■□□□ 1.5
NDEL1-217ENST00000583683 RRS1Q15050 365 aaKnown RBP24.38■■□□□ 1.49
NDEL1-217ENST00000583683 SOX12O15370 315 aa24.38■■□□□ 1.49
NDEL1-217ENST00000583683 FAM9BQ8IZU0 186 aa24.38■■□□□ 1.49
NDEL1-217ENST00000583683 EMILIN1Q9Y6C2 1016 aa24.38■■□□□ 1.49
NDEL1-217ENST00000583683 SLIT3O75094 1523 aa24.37■■□□□ 1.49
NDEL1-217ENST00000583683 UBAP1LF5GYI3 381 aa24.37■■□□□ 1.49
NDEL1-217ENST00000583683 USP19O94966 1318 aa24.36■■□□□ 1.49
NDEL1-217ENST00000583683 SHPRHQ149N8 1683 aa24.36■■□□□ 1.49
NDEL1-217ENST00000583683 ARHGEF10O15013 1369 aa24.36■■□□□ 1.49
NDEL1-217ENST00000583683 PNPLA6Q8IY17 1366 aa24.36■■□□□ 1.49
NDEL1-217ENST00000583683 NFAT5O94916 1531 aa24.36■■□□□ 1.49
NDEL1-217ENST00000583683 MED1Q15648 1581 aaPredicted RBP24.35■■□□□ 1.49
NDEL1-217ENST00000583683 COL3A1P02461 1466 aaPredicted RBP24.35■■□□□ 1.49
NDEL1-217ENST00000583683 CFAP53Q96M91 514 aa24.35■■□□□ 1.49
NDEL1-217ENST00000583683 PEAK1Q9H792 1746 aa24.35■■□□□ 1.49
NDEL1-217ENST00000583683 CRYBG1Q9Y4K1 1723 aa24.35■■□□□ 1.49
NDEL1-217ENST00000583683 CDK12Q9NYV4 1490 aaPredicted RBP24.34■■□□□ 1.49
NDEL1-217ENST00000583683 PPM1GO15355 546 aaPredicted RBP24.34■■□□□ 1.49
NDEL1-217ENST00000583683 LTN1O94822 1766 aa24.33■■□□□ 1.49
NDEL1-217ENST00000583683 PIP4K2BP78356 416 aa24.33■■□□□ 1.49
NDEL1-217ENST00000583683 INSRP06213 1382 aa24.33■■□□□ 1.49
NDEL1-217ENST00000583683 PHRF1Q9P1Y6 1649 aaKnown RBP24.33■■□□□ 1.48
NDEL1-217ENST00000583683 KCNH5Q8NCM2 988 aa24.33■■□□□ 1.48
NDEL1-217ENST00000583683 MAP3K19Q56UN5 1328 aa24.32■■□□□ 1.48
NDEL1-217ENST00000583683 GCP02774 474 aa24.31■■□□□ 1.48
NDEL1-217ENST00000583683 PHLPP1O60346 1717 aa24.31■■□□□ 1.48
NDEL1-217ENST00000583683 YTHDC1Q96MU7 727 aaKnown RBP24.31■■□□□ 1.48
NDEL1-217ENST00000583683 PLEKHG5O94827 1062 aa24.29■■□□□ 1.48
NDEL1-217ENST00000583683 COL16A1Q07092 1604 aaPredicted RBP24.28■■□□□ 1.48
NDEL1-217ENST00000583683 WDR43Q15061 677 aaKnown RBP eCLIP24.27■■□□□ 1.48
NDEL1-217ENST00000583683 LRRC59Q96AG4 307 aaKnown RBP24.27■■□□□ 1.48
NDEL1-217ENST00000583683 ADAMTS8Q9UP79 889 aa24.27■■□□□ 1.48
NDEL1-217ENST00000583683 KIF24Q5T7B8 1368 aa24.27■■□□□ 1.48
NDEL1-217ENST00000583683 CABLES1Q8TDN4 633 aa24.26■■□□□ 1.47
NDEL1-217ENST00000583683 FLT4P35916 1363 aa24.26■■□□□ 1.47
NDEL1-217ENST00000583683 ABCA3Q99758 1704 aa24.26■■□□□ 1.47
NDEL1-217ENST00000583683 DIAPH1O60610 1272 aaKnown RBP24.26■■□□□ 1.47
NDEL1-217ENST00000583683 AMPHP49418 695 aa24.24■■□□□ 1.47
NDEL1-217ENST00000583683 HSP90AB2PQ58FF8 381 aa24.24■■□□□ 1.47
NDEL1-217ENST00000583683 ARHGEF25Q86VW2 580 aa24.24■■□□□ 1.47
NDEL1-217ENST00000583683 RTL1A6NKG5 1358 aa24.23■■□□□ 1.47
NDEL1-217ENST00000583683 HOXC9P31274 260 aa24.22■■□□□ 1.47
NDEL1-217ENST00000583683 COL22A1Q8NFW1 1626 aaPredicted RBP24.22■■□□□ 1.47
NDEL1-217ENST00000583683 IL13P35225 146 aa24.21■■□□□ 1.47
NDEL1-217ENST00000583683 NUDCQ9Y266 331 aa24.21■■□□□ 1.47
NDEL1-217ENST00000583683 BLMP54132 1417 aaPredicted RBP24.2■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms