RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 GPRASP1Q5JY77 1395 aa35.64■■■■□ 3.3
TSEN54-209ENST00000583454 VPS72Q15906 364 aa35.63■■■■□ 3.29
TSEN54-209ENST00000583454 NBPF1Q3BBV0 1214 aa35.63■■■■□ 3.29
TSEN54-209ENST00000583454 COL14A1Q05707 1796 aaKnown RBP35.62■■■■□ 3.29
TSEN54-209ENST00000583454 FAM83GA6ND36 823 aa35.62■■■■□ 3.29
TSEN54-209ENST00000583454 NUDT16Q96DE0 195 aaKnown RBP35.57■■■■□ 3.28
TSEN54-209ENST00000583454 NBPF8Q3BBV2 869 aa35.56■■■■□ 3.28
TSEN54-209ENST00000583454 TRPM1Q7Z4N2 1603 aa35.55■■■■□ 3.28
TSEN54-209ENST00000583454 PHRF1Q9P1Y6 1649 aaKnown RBP35.55■■■■□ 3.28
TSEN54-209ENST00000583454 ONECUT3O60422 494 aaPredicted RBP35.55■■■■□ 3.28
TSEN54-209ENST00000583454 NGDNQ8NEJ9 315 aaKnown RBP35.55■■■■□ 3.28
TSEN54-209ENST00000583454 CCER1Q8TC90 406 aaPredicted RBP35.54■■■■□ 3.28
TSEN54-209ENST00000583454 CDK19Q9BWU1 502 aa35.53■■■■□ 3.28
TSEN54-209ENST00000583454 SEPT12Q8IYM1 358 aa35.52■■■■□ 3.28
TSEN54-209ENST00000583454 CCDC125Q86Z20 511 aa35.51■■■■□ 3.28
TSEN54-209ENST00000583454 POLR3AO14802 1390 aaPredicted RBP35.51■■■■□ 3.27
TSEN54-209ENST00000583454 TIMELESSQ9UNS1 1208 aa35.49■■■■□ 3.27
TSEN54-209ENST00000583454 BTG4Q9NY30 223 aa35.48■■■■□ 3.27
TSEN54-209ENST00000583454 BLMP54132 1417 aaPredicted RBP35.47■■■■□ 3.27
TSEN54-209ENST00000583454 QRICH2Q9H0J4 1663 aa35.46■■■■□ 3.27
TSEN54-209ENST00000583454 PAK3O75914 559 aaPredicted RBP35.46■■■■□ 3.27
TSEN54-209ENST00000583454 CCDC9Q9Y3X0 531 aaKnown RBP35.45■■■■□ 3.27
TSEN54-209ENST00000583454 ROCK2O75116 1388 aaKnown RBP35.43■■■■□ 3.26
TSEN54-209ENST00000583454 ACEP12821 1306 aa35.42■■■■□ 3.26
TSEN54-209ENST00000583454 PLEKHG3A1L390 1219 aa35.42■■■■□ 3.26
TSEN54-209ENST00000583454 CCDC61Q9Y6R9 512 aa35.42■■■■□ 3.26
TSEN54-209ENST00000583454 THSD7AQ9UPZ6 1657 aa35.41■■■■□ 3.26
TSEN54-209ENST00000583454 NRKQ7Z2Y5 1582 aa35.38■■■■□ 3.25
TSEN54-209ENST00000583454 KIAA0232Q92628 1395 aa35.38■■■■□ 3.25
TSEN54-209ENST00000583454 CENPJQ9HC77 1338 aaPredicted RBP35.37■■■■□ 3.25
TSEN54-209ENST00000583454 KRT27Q7Z3Y8 459 aa35.37■■■■□ 3.25
TSEN54-209ENST00000583454 SPATA31A5Q5VU36 1347 aa35.36■■■■□ 3.25
TSEN54-209ENST00000583454 SPATA31A7Q8IWB4 1347 aa35.36■■■■□ 3.25
TSEN54-209ENST00000583454 FAM98CQ17RN3 349 aaKnown RBP35.36■■■■□ 3.25
TSEN54-209ENST00000583454 PRDM11Q9NQV5 511 aa35.36■■■■□ 3.25
TSEN54-209ENST00000583454 PPIP5K1Q6PFW1 1433 aa35.32■■■■□ 3.25
TSEN54-209ENST00000583454 NUTM2GQ5VZR2 741 aa35.32■■■■□ 3.24
TSEN54-209ENST00000583454 DEFB132Q7Z7B7 95 aa35.32■■■■□ 3.24
TSEN54-209ENST00000583454 ZRANB1Q9UGI0 708 aa35.31■■■■□ 3.24
TSEN54-209ENST00000583454 LMO7Q8WWI1 1683 aa35.3■■■■□ 3.24
TSEN54-209ENST00000583454 CARD11Q9BXL7 1154 aa35.3■■■■□ 3.24
TSEN54-209ENST00000583454 CHRNA2Q15822 529 aa35.29■■■■□ 3.24
TSEN54-209ENST00000583454 CABP2Q9NPB3 220 aa35.28■■■■□ 3.24
TSEN54-209ENST00000583454 USP19O94966 1318 aa35.28■■■■□ 3.24
TSEN54-209ENST00000583454 SRPK2P78362 688 aaKnown RBP35.27■■■■□ 3.24
TSEN54-209ENST00000583454 ZC3H6P61129 1189 aaKnown RBP35.26■■■■□ 3.24
TSEN54-209ENST00000583454 CAMTA1Q9Y6Y1 1673 aa35.25■■■■□ 3.23
TSEN54-209ENST00000583454 A0A0G2JS52 829 aa35.25■■■■□ 3.23
TSEN54-209ENST00000583454 MYT1Q01538 1121 aa35.25■■■■□ 3.23
TSEN54-209ENST00000583454 RGPD1P0DJD0 1748 aa35.25■■■■□ 3.23
TSEN54-209ENST00000583454 SPATA31A1Q5TZJ5 1347 aa35.25■■■■□ 3.23
TSEN54-209ENST00000583454 ABTB2Q8N961 1025 aa35.23■■■■□ 3.23
TSEN54-209ENST00000583454 CPDO75976 1380 aa35.23■■■■□ 3.23
TSEN54-209ENST00000583454 TNS1Q9HBL0 1735 aaKnown RBP35.23■■■■□ 3.23
TSEN54-209ENST00000583454 USP6P35125 1406 aa35.2■■■■□ 3.23
TSEN54-209ENST00000583454 BRD4O60885 1362 aaPredicted RBP35.19■■■■□ 3.22
TSEN54-209ENST00000583454 SF3B2Q13435 895 aaKnown RBP35.19■■■■□ 3.22
TSEN54-209ENST00000583454 SSH2Q76I76 1423 aa35.19■■■■□ 3.22
TSEN54-209ENST00000583454 PIK3C2AO00443 1686 aa35.18■■■■□ 3.22
TSEN54-209ENST00000583454 FAM182BQ5T319 152 aa35.18■■■■□ 3.22
TSEN54-209ENST00000583454 STRN4Q9NRL3 753 aa35.17■■■■□ 3.22
TSEN54-209ENST00000583454 AKAP12Q02952 1782 aa35.16■■■■□ 3.22
TSEN54-209ENST00000583454 CABP1Q9NZU7 370 aa35.16■■■■□ 3.22
TSEN54-209ENST00000583454 SLIT3O75094 1523 aa35.16■■■■□ 3.22
TSEN54-209ENST00000583454 NLRP13Q86W25 1043 aa35.13■■■■□ 3.21
TSEN54-209ENST00000583454 GCP02774 474 aa35.12■■■■□ 3.21
TSEN54-209ENST00000583454 SBNO2Q9Y2G9 1366 aa35.12■■■■□ 3.21
TSEN54-209ENST00000583454 EVC2Q86UK5 1308 aa35.1■■■■□ 3.21
TSEN54-209ENST00000583454 COL5A2P05997 1499 aaPredicted RBP35.09■■■■□ 3.21
TSEN54-209ENST00000583454 DISP2A7MBM2 1401 aa35.09■■■■□ 3.21
TSEN54-209ENST00000583454 COL18A1P39060 1754 aa35.09■■■■□ 3.21
TSEN54-209ENST00000583454 BAG6P46379 1132 aa35.08■■■■□ 3.21
TSEN54-209ENST00000583454 LARP1Q6PKG0 1096 aaKnown RBP35.08■■■■□ 3.21
TSEN54-209ENST00000583454 BARGINQ6ZT62 677 aa35.07■■■■□ 3.2
TSEN54-209ENST00000583454 PARP4Q9UKK3 1724 aaKnown RBP35.06■■■■□ 3.2
TSEN54-209ENST00000583454 USP35Q9P2H5 1018 aa35.05■■■■□ 3.2
TSEN54-209ENST00000583454 EVA1CP58658 441 aa35.04■■■■□ 3.2
TSEN54-209ENST00000583454 LRP5O75197 1615 aa35.03■■■■□ 3.2
TSEN54-209ENST00000583454 ST20-MTHFSA0A0A6YYL1 179 aa35.02■■■■□ 3.2
TSEN54-209ENST00000583454 MON2Q7Z3U7 1717 aa35.01■■■■□ 3.2
TSEN54-209ENST00000583454 NLRP6P59044 892 aa35.01■■■■□ 3.2
TSEN54-209ENST00000583454 EN1Q05925 392 aaPredicted RBP35.01■■■■□ 3.2
TSEN54-209ENST00000583454 USP47Q96K76 1375 aa35■■■■□ 3.19
TSEN54-209ENST00000583454 CPSF1Q10570 1443 aaKnown RBP35■■■■□ 3.19
TSEN54-209ENST00000583454 AATKQ6ZMQ8 1374 aa35■■■■□ 3.19
TSEN54-209ENST00000583454 TCP11L2Q8N4U5 519 aa34.99■■■■□ 3.19
TSEN54-209ENST00000583454 TESK2Q96S53 571 aa34.99■■■■□ 3.19
TSEN54-209ENST00000583454 WNK3Q9BYP7 1800 aa34.98■■■■□ 3.19
TSEN54-209ENST00000583454 RGPD5Q99666 1765 aa34.97■■■■□ 3.19
TSEN54-209ENST00000583454 FAM196AQ6ZSG2 479 aa34.97■■■■□ 3.19
TSEN54-209ENST00000583454 CRB1P82279 1406 aa34.97■■■■□ 3.19
TSEN54-209ENST00000583454 TTC21BQ7Z4L5 1316 aa34.96■■■■□ 3.19
TSEN54-209ENST00000583454 THRAP3Q9Y2W1 955 aaKnown RBP34.95■■■■□ 3.19
TSEN54-209ENST00000583454 TRIM37O94972 964 aa34.94■■■■□ 3.18
TSEN54-209ENST00000583454 RREB1Q92766 1687 aa34.94■■■■□ 3.18
TSEN54-209ENST00000583454 PEAK1Q9H792 1746 aa34.94■■■■□ 3.18
TSEN54-209ENST00000583454 LRRC37A3O60309 1634 aa34.93■■■■□ 3.18
TSEN54-209ENST00000583454 SLC24A1O60721 1099 aa34.93■■■■□ 3.18
TSEN54-209ENST00000583454 ZNF692Q9BU19 519 aaPredicted RBP34.93■■■■□ 3.18
TSEN54-209ENST00000583454 USP54Q70EL1 1684 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms