RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 TTC21AQ8NDW8 1320 aa19.8■□□□□ 0.76
SENP3-208ENST00000583277 FYB1O15117 783 aa19.8■□□□□ 0.76
SENP3-208ENST00000583277 ESCO1Q5FWF5 840 aa19.8■□□□□ 0.76
SENP3-208ENST00000583277 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.79■□□□□ 0.76
SENP3-208ENST00000583277 TTC21BQ7Z4L5 1316 aa19.79■□□□□ 0.76
SENP3-208ENST00000583277 PPP2R1AP30153 589 aa19.78■□□□□ 0.76
SENP3-208ENST00000583277 GGNBP2Q9H3C7 697 aa19.77■□□□□ 0.76
SENP3-208ENST00000583277 USP54Q70EL1 1684 aa19.77■□□□□ 0.76
SENP3-208ENST00000583277 PIK3C2AO00443 1686 aa19.76■□□□□ 0.75
SENP3-208ENST00000583277 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
SENP3-208ENST00000583277 CCDC184Q52MB2 194 aa19.74■□□□□ 0.75
SENP3-208ENST00000583277 NME9Q86XW9 330 aa19.74■□□□□ 0.75
SENP3-208ENST00000583277 ORAI2Q96SN7 254 aa19.74■□□□□ 0.75
SENP3-208ENST00000583277 OVOS2A0A0J9YW53 1432 aa19.74■□□□□ 0.75
SENP3-208ENST00000583277 OVOS2Q6IE36 1432 aa19.74■□□□□ 0.75
SENP3-208ENST00000583277 COG3Q96JB2 828 aa19.74■□□□□ 0.75
SENP3-208ENST00000583277 TRPM3Q9HCF6 1732 aaPredicted RBP19.72■□□□□ 0.75
SENP3-208ENST00000583277 PSME1Q06323 249 aa19.72■□□□□ 0.75
SENP3-208ENST00000583277 USP31Q70CQ4 1352 aa19.71■□□□□ 0.75
SENP3-208ENST00000583277 TNNT2P45379 298 aaPredicted RBP19.7■□□□□ 0.74
SENP3-208ENST00000583277 AATKQ6ZMQ8 1374 aa19.69■□□□□ 0.74
SENP3-208ENST00000583277 FOXO3O43524 673 aa19.69■□□□□ 0.74
SENP3-208ENST00000583277 MAP2P11137 1827 aaKnown RBP19.69■□□□□ 0.74
SENP3-208ENST00000583277 MARF1Q9Y4F3 1742 aaKnown RBP19.69■□□□□ 0.74
SENP3-208ENST00000583277 NPHP3Q7Z494 1330 aa19.68■□□□□ 0.74
SENP3-208ENST00000583277 SLAIN2Q9P270 581 aa19.68■□□□□ 0.74
SENP3-208ENST00000583277 PNISRQ8TF01 805 aaKnown RBP19.67■□□□□ 0.74
SENP3-208ENST00000583277 PAK3O75914 559 aaPredicted RBP19.66■□□□□ 0.74
SENP3-208ENST00000583277 CFAP53Q96M91 514 aa19.66■□□□□ 0.74
SENP3-208ENST00000583277 SMG6Q86US8 1419 aaKnown RBP19.66■□□□□ 0.74
SENP3-208ENST00000583277 ALS2Q96Q42 1657 aa19.66■□□□□ 0.74
SENP3-208ENST00000583277 YTHDC1Q96MU7 727 aaKnown RBP19.66■□□□□ 0.74
SENP3-208ENST00000583277 ZRANB1Q9UGI0 708 aa19.66■□□□□ 0.74
SENP3-208ENST00000583277 MTHFSP49914 203 aa19.65■□□□□ 0.74
SENP3-208ENST00000583277 BRINP3Q76B58 766 aa19.65■□□□□ 0.74
SENP3-208ENST00000583277 KRT28Q7Z3Y7 464 aa19.65■□□□□ 0.74
SENP3-208ENST00000583277 FAM9BQ8IZU0 186 aa19.65■□□□□ 0.74
SENP3-208ENST00000583277 ABTB2Q8N961 1025 aa19.65■□□□□ 0.74
SENP3-208ENST00000583277 NHSL1Q5SYE7 1610 aa19.65■□□□□ 0.74
SENP3-208ENST00000583277 SBNO1A3KN83 1393 aa19.64■□□□□ 0.74
SENP3-208ENST00000583277 PXDNQ92626 1479 aa19.64■□□□□ 0.73
SENP3-208ENST00000583277 INSRP06213 1382 aa19.64■□□□□ 0.73
SENP3-208ENST00000583277 CDK12Q9NYV4 1490 aaPredicted RBP19.63■□□□□ 0.73
SENP3-208ENST00000583277 SHPRHQ149N8 1683 aa19.63■□□□□ 0.73
SENP3-208ENST00000583277 NLRP6P59044 892 aa19.62■□□□□ 0.73
SENP3-208ENST00000583277 IQSEC2Q5JU85 1478 aa19.62■□□□□ 0.73
SENP3-208ENST00000583277 XPCQ01831 940 aaPredicted RBP19.61■□□□□ 0.73
SENP3-208ENST00000583277 WDR43Q15061 677 aaKnown RBP eCLIP19.61■□□□□ 0.73
SENP3-208ENST00000583277 COL3A1P02461 1466 aaPredicted RBP19.6■□□□□ 0.73
SENP3-208ENST00000583277 TNS3Q68CZ2 1445 aa19.6■□□□□ 0.73
SENP3-208ENST00000583277 PNPLA6Q8IY17 1366 aa19.59■□□□□ 0.73
SENP3-208ENST00000583277 POLKQ9UBT6 870 aa19.59■□□□□ 0.73
SENP3-208ENST00000583277 ROBO1Q9Y6N7 1651 aa19.59■□□□□ 0.73
SENP3-208ENST00000583277 SLIT3O75094 1523 aa19.59■□□□□ 0.73
SENP3-208ENST00000583277 ARHGEF10O15013 1369 aa19.58■□□□□ 0.72
SENP3-208ENST00000583277 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
SENP3-208ENST00000583277 NFAT5O94916 1531 aa19.57■□□□□ 0.72
SENP3-208ENST00000583277 BLMP54132 1417 aaPredicted RBP19.56■□□□□ 0.72
SENP3-208ENST00000583277 KIF24Q5T7B8 1368 aa19.56■□□□□ 0.72
SENP3-208ENST00000583277 SOS2Q07890 1332 aaPredicted RBP19.56■□□□□ 0.72
SENP3-208ENST00000583277 NUTM2GQ5VZR2 741 aa19.56■□□□□ 0.72
SENP3-208ENST00000583277 ILDR1Q86SU0 546 aaPredicted RBP19.56■□□□□ 0.72
SENP3-208ENST00000583277 AHDC1Q5TGY3 1603 aaPredicted RBP19.56■□□□□ 0.72
SENP3-208ENST00000583277 LTN1O94822 1766 aa19.56■□□□□ 0.72
SENP3-208ENST00000583277 USP19O94966 1318 aa19.55■□□□□ 0.72
SENP3-208ENST00000583277 KCNH5Q8NCM2 988 aa19.55■□□□□ 0.72
SENP3-208ENST00000583277 DDX17Q92841 729 aaKnown RBP19.55■□□□□ 0.72
SENP3-208ENST00000583277 EMILIN1Q9Y6C2 1016 aa19.55■□□□□ 0.72
SENP3-208ENST00000583277 PEAK1Q9H792 1746 aa19.55■□□□□ 0.72
SENP3-208ENST00000583277 SPATA31A3Q5VYP0 1347 aa19.54■□□□□ 0.72
SENP3-208ENST00000583277 PHRF1Q9P1Y6 1649 aaKnown RBP19.54■□□□□ 0.72
SENP3-208ENST00000583277 PPM1GO15355 546 aaPredicted RBP19.54■□□□□ 0.72
SENP3-208ENST00000583277 RRS1Q15050 365 aaKnown RBP19.54■□□□□ 0.72
SENP3-208ENST00000583277 NUDCQ9Y266 331 aa19.54■□□□□ 0.72
SENP3-208ENST00000583277 LMOD2Q6P5Q4 547 aa19.53■□□□□ 0.72
SENP3-208ENST00000583277 CRYBG1Q9Y4K1 1723 aa19.53■□□□□ 0.72
SENP3-208ENST00000583277 TOM1O60784 492 aa19.53■□□□□ 0.72
SENP3-208ENST00000583277 FBLN1P23142 703 aa19.53■□□□□ 0.72
SENP3-208ENST00000583277 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
SENP3-208ENST00000583277 RTL1A6NKG5 1358 aa19.52■□□□□ 0.72
SENP3-208ENST00000583277 FLT4P35916 1363 aa19.52■□□□□ 0.72
SENP3-208ENST00000583277 SOX12O15370 315 aa19.52■□□□□ 0.71
SENP3-208ENST00000583277 DIAPH1O60610 1272 aaKnown RBP19.52■□□□□ 0.71
SENP3-208ENST00000583277 ADAMTS8Q9UP79 889 aa19.52■□□□□ 0.71
SENP3-208ENST00000583277 MAP3K19Q56UN5 1328 aa19.51■□□□□ 0.71
SENP3-208ENST00000583277 CENPBP07199 599 aaPredicted RBP19.51■□□□□ 0.71
SENP3-208ENST00000583277 AMPHP49418 695 aa19.48■□□□□ 0.71
SENP3-208ENST00000583277 ABCA3Q99758 1704 aa19.47■□□□□ 0.71
SENP3-208ENST00000583277 GCP02774 474 aa19.47■□□□□ 0.71
SENP3-208ENST00000583277 ZBED9Q6R2W3 1325 aa19.47■□□□□ 0.71
SENP3-208ENST00000583277 PHLPP1O60346 1717 aa19.46■□□□□ 0.71
SENP3-208ENST00000583277 ABCC6O95255 1503 aa19.46■□□□□ 0.71
SENP3-208ENST00000583277 U2AF1L5P0DN76 240 aaPredicted RBP19.45■□□□□ 0.7
SENP3-208ENST00000583277 U2AF1Q01081 240 aaKnown RBP eCLIP19.45■□□□□ 0.7
SENP3-208ENST00000583277 RGPD1P0DJD0 1748 aa19.45■□□□□ 0.7
SENP3-208ENST00000583277 U2SURPO15042 1029 aaKnown RBP19.44■□□□□ 0.7
SENP3-208ENST00000583277 IL13P35225 146 aa19.44■□□□□ 0.7
SENP3-208ENST00000583277 CERKQ8TCT0 537 aa19.44■□□□□ 0.7
SENP3-208ENST00000583277 UBAP1LF5GYI3 381 aa19.44■□□□□ 0.7
SENP3-208ENST00000583277 COL16A1Q07092 1604 aaPredicted RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms