RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ST20-MTHFSA0A0A6YYL1 179 aa17.77■□□□□ 0.44
SMARCE1-218ENST00000582955 USP47Q96K76 1375 aa17.77■□□□□ 0.43
SMARCE1-218ENST00000582955 ALS2Q96Q42 1657 aa17.77■□□□□ 0.43
SMARCE1-218ENST00000582955 ATAD2Q6PL18 1390 aa17.76■□□□□ 0.43
SMARCE1-218ENST00000582955 ABCA3Q99758 1704 aa17.73■□□□□ 0.43
SMARCE1-218ENST00000582955 MARF1Q9Y4F3 1742 aaKnown RBP17.73■□□□□ 0.43
SMARCE1-218ENST00000582955 TESK2Q96S53 571 aa17.72■□□□□ 0.43
SMARCE1-218ENST00000582955 USP21Q9UK80 565 aa17.72■□□□□ 0.43
SMARCE1-218ENST00000582955 SLC24A1O60721 1099 aa17.71■□□□□ 0.43
SMARCE1-218ENST00000582955 NUTM2GQ5VZR2 741 aa17.71■□□□□ 0.43
SMARCE1-218ENST00000582955 USP6P35125 1406 aa17.71■□□□□ 0.43
SMARCE1-218ENST00000582955 FNBP4Q8N3X1 1017 aaPredicted RBP17.7■□□□□ 0.42
SMARCE1-218ENST00000582955 ABTB2Q8N961 1025 aa17.7■□□□□ 0.42
SMARCE1-218ENST00000582955 TMC1Q8TDI8 760 aa17.7■□□□□ 0.42
SMARCE1-218ENST00000582955 QTRT2Q9H974 415 aaKnown RBP17.69■□□□□ 0.42
SMARCE1-218ENST00000582955 BRD4O60885 1362 aaPredicted RBP17.68■□□□□ 0.42
SMARCE1-218ENST00000582955 SOCS7O14512 581 aa17.68■□□□□ 0.42
SMARCE1-218ENST00000582955 RXRBP28702 533 aa17.68■□□□□ 0.42
SMARCE1-218ENST00000582955 ZNF692Q9BU19 519 aaPredicted RBP17.68■□□□□ 0.42
SMARCE1-218ENST00000582955 TMF1P82094 1093 aa17.67■□□□□ 0.42
SMARCE1-218ENST00000582955 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
SMARCE1-218ENST00000582955 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
SMARCE1-218ENST00000582955 AKAP12Q02952 1782 aa17.66■□□□□ 0.42
SMARCE1-218ENST00000582955 PUS7Q96PZ0 661 aaKnown RBP17.66■□□□□ 0.42
SMARCE1-218ENST00000582955 TRPC5Q9UL62 973 aaPredicted RBP17.66■□□□□ 0.42
SMARCE1-218ENST00000582955 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
SMARCE1-218ENST00000582955 CPSF1Q10570 1443 aaKnown RBP17.65■□□□□ 0.42
SMARCE1-218ENST00000582955 NLRP13Q86W25 1043 aa17.65■□□□□ 0.42
SMARCE1-218ENST00000582955 SLC12A5Q9H2X9 1139 aa17.65■□□□□ 0.42
SMARCE1-218ENST00000582955 BCL9LQ86UU0 1499 aa17.64■□□□□ 0.41
SMARCE1-218ENST00000582955 SLIT2O94813 1529 aa17.64■□□□□ 0.41
SMARCE1-218ENST00000582955 RBM6P78332 1123 aaKnown RBP17.64■□□□□ 0.41
SMARCE1-218ENST00000582955 HDGFL2Q7Z4V5 671 aaPredicted RBP17.64■□□□□ 0.41
SMARCE1-218ENST00000582955 PLCH1Q4KWH8 1693 aa17.64■□□□□ 0.41
SMARCE1-218ENST00000582955 SSH2Q76I76 1423 aa17.64■□□□□ 0.41
SMARCE1-218ENST00000582955 FAM83GA6ND36 823 aa17.63■□□□□ 0.41
SMARCE1-218ENST00000582955 NLRP6P59044 892 aa17.63■□□□□ 0.41
SMARCE1-218ENST00000582955 UNC5CLQ8IV45 518 aa17.63■□□□□ 0.41
SMARCE1-218ENST00000582955 PRDM11Q9NQV5 511 aa17.63■□□□□ 0.41
SMARCE1-218ENST00000582955 TTC21BQ7Z4L5 1316 aa17.63■□□□□ 0.41
SMARCE1-218ENST00000582955 ATRNO75882 1429 aa17.63■□□□□ 0.41
SMARCE1-218ENST00000582955 MON2Q7Z3U7 1717 aa17.62■□□□□ 0.41
SMARCE1-218ENST00000582955 ZC3H6P61129 1189 aaKnown RBP17.62■□□□□ 0.41
SMARCE1-218ENST00000582955 EIF4G2P78344 907 aaKnown RBP eCLIP17.62■□□□□ 0.41
SMARCE1-218ENST00000582955 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
SMARCE1-218ENST00000582955 USP19O94966 1318 aa17.62■□□□□ 0.41
SMARCE1-218ENST00000582955 CD163L1Q9NR16 1453 aa17.62■□□□□ 0.41
SMARCE1-218ENST00000582955 NRKQ7Z2Y5 1582 aa17.62■□□□□ 0.41
SMARCE1-218ENST00000582955 PIK3C2AO00443 1686 aa17.61■□□□□ 0.41
SMARCE1-218ENST00000582955 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.61■□□□□ 0.41
SMARCE1-218ENST00000582955 COL14A1Q05707 1796 aaKnown RBP17.61■□□□□ 0.41
SMARCE1-218ENST00000582955 CDCA8Q53HL2 280 aa17.61■□□□□ 0.41
SMARCE1-218ENST00000582955 TTC21AQ8NDW8 1320 aa17.61■□□□□ 0.41
SMARCE1-218ENST00000582955 KIAA0232Q92628 1395 aa17.61■□□□□ 0.41
SMARCE1-218ENST00000582955 NINLQ9Y2I6 1382 aa17.61■□□□□ 0.41
SMARCE1-218ENST00000582955 NWD2Q9ULI1 1742 aa17.61■□□□□ 0.41
SMARCE1-218ENST00000582955 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.6■□□□□ 0.41
SMARCE1-218ENST00000582955 BTG4Q9NY30 223 aa17.6■□□□□ 0.41
SMARCE1-218ENST00000582955 A0A1W2PP64 1363 aa17.6■□□□□ 0.41
SMARCE1-218ENST00000582955 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
SMARCE1-218ENST00000582955 HSPA5P11021 654 aaKnown RBP17.59■□□□□ 0.41
SMARCE1-218ENST00000582955 CHRNA2Q15822 529 aa17.59■□□□□ 0.41
SMARCE1-218ENST00000582955 CCDC9Q9Y3X0 531 aaKnown RBP17.59■□□□□ 0.41
SMARCE1-218ENST00000582955 GCP02774 474 aa17.58■□□□□ 0.4
SMARCE1-218ENST00000582955 GJD4Q96KN9 370 aaPredicted RBP17.58■□□□□ 0.4
SMARCE1-218ENST00000582955 RGS12O14924 1447 aa17.57■□□□□ 0.4
SMARCE1-218ENST00000582955 EDC4Q6P2E9 1401 aaKnown RBP17.57■□□□□ 0.4
SMARCE1-218ENST00000582955 ZBTB7CA1YPR0 619 aa17.57■□□□□ 0.4
SMARCE1-218ENST00000582955 SLIT3O75094 1523 aa17.57■□□□□ 0.4
SMARCE1-218ENST00000582955 VPS72Q15906 364 aa17.56■□□□□ 0.4
SMARCE1-218ENST00000582955 POLR3GLQ9BT43 218 aa17.56■□□□□ 0.4
SMARCE1-218ENST00000582955 NRAPQ86VF7 1730 aa17.55■□□□□ 0.4
SMARCE1-218ENST00000582955 SOX12O15370 315 aa17.55■□□□□ 0.4
SMARCE1-218ENST00000582955 NME9Q86XW9 330 aa17.55■□□□□ 0.4
SMARCE1-218ENST00000582955 CPDO75976 1380 aa17.54■□□□□ 0.4
SMARCE1-218ENST00000582955 ANKRD36BQ8N2N9 1353 aa17.54■□□□□ 0.4
SMARCE1-218ENST00000582955 ZRANB1Q9UGI0 708 aa17.54■□□□□ 0.4
SMARCE1-218ENST00000582955 GLI3P10071 1580 aa17.53■□□□□ 0.4
SMARCE1-218ENST00000582955 KCNH5Q8NCM2 988 aa17.53■□□□□ 0.4
SMARCE1-218ENST00000582955 STRN4Q9NRL3 753 aa17.53■□□□□ 0.4
SMARCE1-218ENST00000582955 USP31Q70CQ4 1352 aa17.52■□□□□ 0.39
SMARCE1-218ENST00000582955 EVA1CP58658 441 aa17.51■□□□□ 0.39
SMARCE1-218ENST00000582955 MYOM1P52179 1685 aa17.5■□□□□ 0.39
SMARCE1-218ENST00000582955 LMO7Q8WWI1 1683 aa17.49■□□□□ 0.39
SMARCE1-218ENST00000582955 CAMTA1Q9Y6Y1 1673 aa17.49■□□□□ 0.39
SMARCE1-218ENST00000582955 A0A0G2JS52 829 aa17.49■□□□□ 0.39
SMARCE1-218ENST00000582955 MYT1Q01538 1121 aa17.49■□□□□ 0.39
SMARCE1-218ENST00000582955 USP54Q70EL1 1684 aa17.48■□□□□ 0.39
SMARCE1-218ENST00000582955 SPATA31A5Q5VU36 1347 aa17.47■□□□□ 0.39
SMARCE1-218ENST00000582955 SPATA31A7Q8IWB4 1347 aa17.47■□□□□ 0.39
SMARCE1-218ENST00000582955 OVOS2A0A0J9YW53 1432 aa17.47■□□□□ 0.39
SMARCE1-218ENST00000582955 OVOS2Q6IE36 1432 aa17.47■□□□□ 0.39
SMARCE1-218ENST00000582955 NFAT5O94916 1531 aa17.47■□□□□ 0.39
SMARCE1-218ENST00000582955 ARHGEF25Q86VW2 580 aa17.47■□□□□ 0.39
SMARCE1-218ENST00000582955 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
SMARCE1-218ENST00000582955 FAM98CQ17RN3 349 aaKnown RBP17.46■□□□□ 0.39
SMARCE1-218ENST00000582955 SEPT12Q8IYM1 358 aa17.46■□□□□ 0.39
SMARCE1-218ENST00000582955 COG3Q96JB2 828 aa17.46■□□□□ 0.39
SMARCE1-218ENST00000582955 COL5A2P05997 1499 aaPredicted RBP17.45■□□□□ 0.38
SMARCE1-218ENST00000582955 LARP1Q6PKG0 1096 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms