RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 ARHGEF10O15013 1369 aa22.97■■□□□ 1.27
RNF43-206ENST00000582293 NUTM2BA6NNL0 878 aaPredicted RBP22.96■■□□□ 1.27
RNF43-206ENST00000582293 NUTM2EB1AL46 878 aaPredicted RBP22.96■■□□□ 1.27
RNF43-206ENST00000582293 NUTM2AQ8IVF1 878 aaPredicted RBP22.96■■□□□ 1.27
RNF43-206ENST00000582293 A0A1W2PP64 1363 aa22.95■■□□□ 1.26
RNF43-206ENST00000582293 PAK3O75914 559 aaPredicted RBP22.95■■□□□ 1.26
RNF43-206ENST00000582293 NINLQ9Y2I6 1382 aa22.95■■□□□ 1.26
RNF43-206ENST00000582293 PIK3C2AO00443 1686 aa22.94■■□□□ 1.26
RNF43-206ENST00000582293 BRD4O60885 1362 aaPredicted RBP22.94■■□□□ 1.26
RNF43-206ENST00000582293 CABLES1Q8TDN4 633 aa22.94■■□□□ 1.26
RNF43-206ENST00000582293 ZNF692Q9BU19 519 aaPredicted RBP22.94■■□□□ 1.26
RNF43-206ENST00000582293 KTN1Q86UP2 1357 aaKnown RBP22.93■■□□□ 1.26
RNF43-206ENST00000582293 LMOD2Q6P5Q4 547 aa22.93■■□□□ 1.26
RNF43-206ENST00000582293 CDCA8Q53HL2 280 aa22.92■■□□□ 1.26
RNF43-206ENST00000582293 MARF1Q9Y4F3 1742 aaKnown RBP22.91■■□□□ 1.26
RNF43-206ENST00000582293 TTC21BQ7Z4L5 1316 aa22.91■■□□□ 1.26
RNF43-206ENST00000582293 PHRF1Q9P1Y6 1649 aaKnown RBP22.9■■□□□ 1.26
RNF43-206ENST00000582293 RGS17Q9UGC6 210 aaPredicted RBP22.9■■□□□ 1.26
RNF43-206ENST00000582293 ANKRD36BQ8N2N9 1353 aa22.89■■□□□ 1.26
RNF43-206ENST00000582293 NUTM2GQ5VZR2 741 aa22.89■■□□□ 1.25
RNF43-206ENST00000582293 PLEKHG5O94827 1062 aa22.88■■□□□ 1.25
RNF43-206ENST00000582293 ADAMTS2O95450 1211 aa22.88■■□□□ 1.25
RNF43-206ENST00000582293 HDGFL2Q7Z4V5 671 aaPredicted RBP22.87■■□□□ 1.25
RNF43-206ENST00000582293 ABTB2Q8N961 1025 aa22.87■■□□□ 1.25
RNF43-206ENST00000582293 TERF2IPQ9NYB0 399 aa22.87■■□□□ 1.25
RNF43-206ENST00000582293 EDC4Q6P2E9 1401 aaKnown RBP22.87■■□□□ 1.25
RNF43-206ENST00000582293 USP19O94966 1318 aa22.86■■□□□ 1.25
RNF43-206ENST00000582293 KIF7Q2M1P5 1343 aa22.85■■□□□ 1.25
RNF43-206ENST00000582293 TTC21AQ8NDW8 1320 aa22.85■■□□□ 1.25
RNF43-206ENST00000582293 USP54Q70EL1 1684 aa22.85■■□□□ 1.25
RNF43-206ENST00000582293 SLIT3O75094 1523 aa22.84■■□□□ 1.25
RNF43-206ENST00000582293 MEX3CQ5U5Q3 659 aaKnown RBP22.84■■□□□ 1.25
RNF43-206ENST00000582293 CARD14Q9BXL6 1004 aa22.84■■□□□ 1.25
RNF43-206ENST00000582293 ZRANB1Q9UGI0 708 aa22.84■■□□□ 1.25
RNF43-206ENST00000582293 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.83■■□□□ 1.25
RNF43-206ENST00000582293 NME9Q86XW9 330 aa22.82■■□□□ 1.24
RNF43-206ENST00000582293 C8orf37Q96NL8 207 aa22.82■■□□□ 1.24
RNF43-206ENST00000582293 POLR3GLQ9BT43 218 aa22.82■■□□□ 1.24
RNF43-206ENST00000582293 USP31Q70CQ4 1352 aa22.81■■□□□ 1.24
RNF43-206ENST00000582293 NLRP6P59044 892 aa22.81■■□□□ 1.24
RNF43-206ENST00000582293 NLRP13Q86W25 1043 aa22.8■■□□□ 1.24
RNF43-206ENST00000582293 AFF2P51816 1311 aa22.8■■□□□ 1.24
RNF43-206ENST00000582293 WASHC2AQ641Q2 1341 aa22.8■■□□□ 1.24
RNF43-206ENST00000582293 ZEB1P37275 1124 aaPredicted RBP22.79■■□□□ 1.24
RNF43-206ENST00000582293 CCDC7Q96M83 1385 aa22.78■■□□□ 1.24
RNF43-206ENST00000582293 SLIT2O94813 1529 aa22.78■■□□□ 1.24
RNF43-206ENST00000582293 OVOS2A0A0J9YW53 1432 aa22.78■■□□□ 1.24
RNF43-206ENST00000582293 OVOS2Q6IE36 1432 aa22.78■■□□□ 1.24
RNF43-206ENST00000582293 FNBP4Q8N3X1 1017 aaPredicted RBP22.78■■□□□ 1.24
RNF43-206ENST00000582293 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
RNF43-206ENST00000582293 BCL9LQ86UU0 1499 aa22.78■■□□□ 1.24
RNF43-206ENST00000582293 PLCH1Q4KWH8 1693 aa22.77■■□□□ 1.24
RNF43-206ENST00000582293 NSD3Q9BZ95 1437 aa22.77■■□□□ 1.24
RNF43-206ENST00000582293 FAM83GA6ND36 823 aa22.77■■□□□ 1.24
RNF43-206ENST00000582293 GCP02774 474 aa22.77■■□□□ 1.24
RNF43-206ENST00000582293 POTEAQ6S8J7 498 aa22.77■■□□□ 1.24
RNF43-206ENST00000582293 NFAT5O94916 1531 aa22.77■■□□□ 1.24
RNF43-206ENST00000582293 HAP1P54257 671 aaPredicted RBP22.76■■□□□ 1.23
RNF43-206ENST00000582293 NGLY1Q96IV0 654 aa22.76■■□□□ 1.23
RNF43-206ENST00000582293 KIAA0232Q92628 1395 aa22.76■■□□□ 1.23
RNF43-206ENST00000582293 COL14A1Q05707 1796 aaKnown RBP22.75■■□□□ 1.23
RNF43-206ENST00000582293 CPDO75976 1380 aa22.74■■□□□ 1.23
RNF43-206ENST00000582293 KIF20BQ96Q89 1820 aa22.73■■□□□ 1.23
RNF43-206ENST00000582293 FYB1O15117 783 aa22.73■■□□□ 1.23
RNF43-206ENST00000582293 ZC3H6P61129 1189 aaKnown RBP22.73■■□□□ 1.23
RNF43-206ENST00000582293 PANK3Q9H999 370 aa22.73■■□□□ 1.23
RNF43-206ENST00000582293 NRAPQ86VF7 1730 aa22.73■■□□□ 1.23
RNF43-206ENST00000582293 NWD2Q9ULI1 1742 aa22.73■■□□□ 1.23
RNF43-206ENST00000582293 LMO7Q8WWI1 1683 aa22.72■■□□□ 1.23
RNF43-206ENST00000582293 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.72■■□□□ 1.23
RNF43-206ENST00000582293 COL18A1P39060 1754 aa22.71■■□□□ 1.23
RNF43-206ENST00000582293 CHRNA2Q15822 529 aa22.7■■□□□ 1.22
RNF43-206ENST00000582293 ZNF772Q68DY9 489 aaPredicted RBP22.7■■□□□ 1.22
RNF43-206ENST00000582293 USP21Q9UK80 565 aa22.7■■□□□ 1.22
RNF43-206ENST00000582293 ATRNO75882 1429 aa22.69■■□□□ 1.22
RNF43-206ENST00000582293 GGNBP2Q9H3C7 697 aa22.69■■□□□ 1.22
RNF43-206ENST00000582293 PRDM11Q9NQV5 511 aa22.69■■□□□ 1.22
RNF43-206ENST00000582293 ILDR2Q71H61 639 aa22.68■■□□□ 1.22
RNF43-206ENST00000582293 CAMTA1Q9Y6Y1 1673 aa22.68■■□□□ 1.22
RNF43-206ENST00000582293 SOX12O15370 315 aa22.67■■□□□ 1.22
RNF43-206ENST00000582293 ARHGEF25Q86VW2 580 aa22.67■■□□□ 1.22
RNF43-206ENST00000582293 KCNH5Q8NCM2 988 aa22.67■■□□□ 1.22
RNF43-206ENST00000582293 UNC5CLQ8IV45 518 aa22.66■■□□□ 1.22
RNF43-206ENST00000582293 BTG4Q9NY30 223 aa22.66■■□□□ 1.22
RNF43-206ENST00000582293 PER1O15534 1290 aaPredicted RBP22.64■■□□□ 1.21
RNF43-206ENST00000582293 FBLN1P23142 703 aa22.64■■□□□ 1.21
RNF43-206ENST00000582293 COG3Q96JB2 828 aa22.64■■□□□ 1.21
RNF43-206ENST00000582293 QTRT2Q9H974 415 aaKnown RBP22.64■■□□□ 1.21
RNF43-206ENST00000582293 AATKQ6ZMQ8 1374 aa22.63■■□□□ 1.21
RNF43-206ENST00000582293 LTN1O94822 1766 aa22.63■■□□□ 1.21
RNF43-206ENST00000582293 ANKRD26Q9UPS8 1709 aa22.63■■□□□ 1.21
RNF43-206ENST00000582293 GLI3P10071 1580 aa22.63■■□□□ 1.21
RNF43-206ENST00000582293 AXIN2Q9Y2T1 843 aa22.62■■□□□ 1.21
RNF43-206ENST00000582293 CGNL1Q0VF96 1302 aa22.61■■□□□ 1.21
RNF43-206ENST00000582293 TRPC5Q9UL62 973 aaPredicted RBP22.61■■□□□ 1.21
RNF43-206ENST00000582293 RGPD5Q99666 1765 aa22.61■■□□□ 1.21
RNF43-206ENST00000582293 COL5A2P05997 1499 aaPredicted RBP22.6■■□□□ 1.21
RNF43-206ENST00000582293 ABCC6O95255 1503 aa22.59■■□□□ 1.21
RNF43-206ENST00000582293 ZBTB7CA1YPR0 619 aa22.59■■□□□ 1.21
RNF43-206ENST00000582293 VPS72Q15906 364 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms