RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 TTC21AQ8NDW8 1320 aa15.8■□□□□ 0.12
GGA3-211ENST00000582232 KRT28Q7Z3Y7 464 aa15.8■□□□□ 0.12
GGA3-211ENST00000582232 KNSTRNQ9Y448 316 aa15.8■□□□□ 0.12
GGA3-211ENST00000582232 SBNO1A3KN83 1393 aa15.79■□□□□ 0.12
GGA3-211ENST00000582232 TTC21BQ7Z4L5 1316 aa15.79■□□□□ 0.12
GGA3-211ENST00000582232 CGNL1Q0VF96 1302 aa15.78■□□□□ 0.12
GGA3-211ENST00000582232 ILDR2Q71H61 639 aa15.78■□□□□ 0.12
GGA3-211ENST00000582232 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
GGA3-211ENST00000582232 NSD2O96028 1365 aa15.77■□□□□ 0.12
GGA3-211ENST00000582232 USP54Q70EL1 1684 aa15.77■□□□□ 0.12
GGA3-211ENST00000582232 ALS2Q96Q42 1657 aa15.77■□□□□ 0.12
GGA3-211ENST00000582232 PIP4K2BP78356 416 aa15.77■□□□□ 0.12
GGA3-211ENST00000582232 AMER1Q5JTC6 1135 aaPredicted RBP15.77■□□□□ 0.12
GGA3-211ENST00000582232 DDX17Q92841 729 aaKnown RBP15.77■□□□□ 0.12
GGA3-211ENST00000582232 ANKRD26Q9UPS8 1709 aa15.76■□□□□ 0.11
GGA3-211ENST00000582232 PIK3C2AO00443 1686 aa15.76■□□□□ 0.11
GGA3-211ENST00000582232 PHLPP1O60346 1717 aa15.75■□□□□ 0.11
GGA3-211ENST00000582232 FYB1O15117 783 aa15.75■□□□□ 0.11
GGA3-211ENST00000582232 TNS3Q68CZ2 1445 aa15.75■□□□□ 0.11
GGA3-211ENST00000582232 COL16A1Q07092 1604 aaPredicted RBP15.75■□□□□ 0.11
GGA3-211ENST00000582232 USP31Q70CQ4 1352 aa15.75■□□□□ 0.11
GGA3-211ENST00000582232 SPATA31A3Q5VYP0 1347 aa15.74■□□□□ 0.11
GGA3-211ENST00000582232 XPCQ01831 940 aaPredicted RBP15.74■□□□□ 0.11
GGA3-211ENST00000582232 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.74■□□□□ 0.11
GGA3-211ENST00000582232 ARHGEF10O15013 1369 aa15.73■□□□□ 0.11
GGA3-211ENST00000582232 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
GGA3-211ENST00000582232 MARF1Q9Y4F3 1742 aaKnown RBP15.72■□□□□ 0.11
GGA3-211ENST00000582232 OVOS2A0A0J9YW53 1432 aa15.72■□□□□ 0.11
GGA3-211ENST00000582232 OVOS2Q6IE36 1432 aa15.72■□□□□ 0.11
GGA3-211ENST00000582232 PAK3O75914 559 aaPredicted RBP15.72■□□□□ 0.11
GGA3-211ENST00000582232 NME9Q86XW9 330 aa15.72■□□□□ 0.11
GGA3-211ENST00000582232 LRRC59Q96AG4 307 aaKnown RBP15.72■□□□□ 0.11
GGA3-211ENST00000582232 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.11
GGA3-211ENST00000582232 ABTB2Q8N961 1025 aa15.71■□□□□ 0.11
GGA3-211ENST00000582232 MED1Q15648 1581 aaPredicted RBP15.7■□□□□ 0.1
GGA3-211ENST00000582232 NLRP13Q86W25 1043 aa15.69■□□□□ 0.1
GGA3-211ENST00000582232 GGNBP2Q9H3C7 697 aa15.69■□□□□ 0.1
GGA3-211ENST00000582232 COL22A1Q8NFW1 1626 aaPredicted RBP15.68■□□□□ 0.1
GGA3-211ENST00000582232 CRYBG1Q9Y4K1 1723 aa15.68■□□□□ 0.1
GGA3-211ENST00000582232 PARD3Q8TEW0 1356 aa15.68■□□□□ 0.1
GGA3-211ENST00000582232 NLRP6P59044 892 aa15.68■□□□□ 0.1
GGA3-211ENST00000582232 COG3Q96JB2 828 aa15.68■□□□□ 0.1
GGA3-211ENST00000582232 SLIT3O75094 1523 aa15.68■□□□□ 0.1
GGA3-211ENST00000582232 USP19O94966 1318 aa15.68■□□□□ 0.1
GGA3-211ENST00000582232 RALBP1Q15311 655 aa15.67■□□□□ 0.1
GGA3-211ENST00000582232 CC2D1BQ5T0F9 858 aaKnown RBP15.67■□□□□ 0.1
GGA3-211ENST00000582232 PRKRIP1Q9H875 184 aaPredicted RBP15.67■□□□□ 0.1
GGA3-211ENST00000582232 ZRANB1Q9UGI0 708 aa15.67■□□□□ 0.1
GGA3-211ENST00000582232 SHPRHQ149N8 1683 aa15.67■□□□□ 0.1
GGA3-211ENST00000582232 MORC1Q86VD1 984 aa15.66■□□□□ 0.1
GGA3-211ENST00000582232 PNPLA6Q8IY17 1366 aa15.65■□□□□ 0.1
GGA3-211ENST00000582232 LMOD2Q6P5Q4 547 aa15.65■□□□□ 0.1
GGA3-211ENST00000582232 PHRF1Q9P1Y6 1649 aaKnown RBP15.65■□□□□ 0.1
GGA3-211ENST00000582232 AATKQ6ZMQ8 1374 aa15.64■□□□□ 0.09
GGA3-211ENST00000582232 SOCS7O14512 581 aa15.64■□□□□ 0.09
GGA3-211ENST00000582232 ANP32CO43423 234 aa15.64■□□□□ 0.09
GGA3-211ENST00000582232 HSPA1LP34931 641 aa15.64■□□□□ 0.09
GGA3-211ENST00000582232 NUTM2GQ5VZR2 741 aa15.64■□□□□ 0.09
GGA3-211ENST00000582232 ABCA3Q99758 1704 aa15.64■□□□□ 0.09
GGA3-211ENST00000582232 JCADQ9P266 1359 aa15.63■□□□□ 0.09
GGA3-211ENST00000582232 KCNH5Q8NCM2 988 aa15.63■□□□□ 0.09
GGA3-211ENST00000582232 MAP2P11137 1827 aaKnown RBP15.63■□□□□ 0.09
GGA3-211ENST00000582232 NFAT5O94916 1531 aa15.63■□□□□ 0.09
GGA3-211ENST00000582232 GCP02774 474 aa15.62■□□□□ 0.09
GGA3-211ENST00000582232 MYBBP1AQ9BQG0 1328 aaKnown RBP15.6■□□□□ 0.09
GGA3-211ENST00000582232 SMG6Q86US8 1419 aaKnown RBP15.6■□□□□ 0.09
GGA3-211ENST00000582232 PPP2R1AP30153 589 aa15.59■□□□□ 0.09
GGA3-211ENST00000582232 KIF24Q5T7B8 1368 aa15.59■□□□□ 0.09
GGA3-211ENST00000582232 LTN1O94822 1766 aa15.58■□□□□ 0.08
GGA3-211ENST00000582232 CNGB1Q14028 1251 aaPredicted RBP15.58■□□□□ 0.08
GGA3-211ENST00000582232 CABLES1Q8TDN4 633 aa15.58■□□□□ 0.08
GGA3-211ENST00000582232 POLKQ9UBT6 870 aa15.58■□□□□ 0.08
GGA3-211ENST00000582232 CPDO75976 1380 aa15.58■□□□□ 0.08
GGA3-211ENST00000582232 TNNT2P45379 298 aaPredicted RBP15.57■□□□□ 0.08
GGA3-211ENST00000582232 ARHGEF25Q86VW2 580 aa15.57■□□□□ 0.08
GGA3-211ENST00000582232 SPATA31A6Q5VVP1 1343 aa15.57■□□□□ 0.08
GGA3-211ENST00000582232 ABCC6O95255 1503 aa15.57■□□□□ 0.08
GGA3-211ENST00000582232 FBLN1P23142 703 aa15.56■□□□□ 0.08
GGA3-211ENST00000582232 RTL1A6NKG5 1358 aa15.55■□□□□ 0.08
GGA3-211ENST00000582232 INSRP06213 1382 aa15.55■□□□□ 0.08
GGA3-211ENST00000582232 MAP3K19Q56UN5 1328 aa15.55■□□□□ 0.08
GGA3-211ENST00000582232 COL18A1P39060 1754 aa15.54■□□□□ 0.08
GGA3-211ENST00000582232 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
GGA3-211ENST00000582232 CDK12Q9NYV4 1490 aaPredicted RBP15.54■□□□□ 0.08
GGA3-211ENST00000582232 MTHFSP49914 203 aa15.54■□□□□ 0.08
GGA3-211ENST00000582232 RRS1Q15050 365 aaKnown RBP15.54■□□□□ 0.08
GGA3-211ENST00000582232 SOX12O15370 315 aa15.53■□□□□ 0.08
GGA3-211ENST00000582232 HAP1P54257 671 aaPredicted RBP15.53■□□□□ 0.08
GGA3-211ENST00000582232 MIER1Q8N108 512 aa15.53■□□□□ 0.08
GGA3-211ENST00000582232 EMILIN1Q9Y6C2 1016 aa15.53■□□□□ 0.08
GGA3-211ENST00000582232 FLT4P35916 1363 aa15.52■□□□□ 0.08
GGA3-211ENST00000582232 KIAA0232Q92628 1395 aa15.52■□□□□ 0.08
GGA3-211ENST00000582232 CCER2I3L3R5 266 aa15.52■□□□□ 0.08
GGA3-211ENST00000582232 ZC3H6P61129 1189 aaKnown RBP15.52■□□□□ 0.08
GGA3-211ENST00000582232 IP6K1Q92551 441 aa15.52■□□□□ 0.08
GGA3-211ENST00000582232 LMO7Q8WWI1 1683 aa15.51■□□□□ 0.07
GGA3-211ENST00000582232 PLEKHG5O94827 1062 aa15.51■□□□□ 0.07
GGA3-211ENST00000582232 COL14A1Q05707 1796 aaKnown RBP15.51■□□□□ 0.07
GGA3-211ENST00000582232 BLMP54132 1417 aaPredicted RBP15.51■□□□□ 0.07
GGA3-211ENST00000582232 HOXC9P31274 260 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms