RNA–Protein interactions for RNA: ENST00000581973.6

SPECC1-216, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 5

Gene SPECC1, Length 674 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-216ENST00000581973 TRPM3Q9HCF6 1732 aaPredicted RBP22.44■■□□□ 1.18
SPECC1-216ENST00000581973 PLCH1Q4KWH8 1693 aa22.43■■□□□ 1.18
SPECC1-216ENST00000581973 QRICH2Q9H0J4 1663 aa22.43■■□□□ 1.18
SPECC1-216ENST00000581973 BTG4Q9NY30 223 aa22.42■■□□□ 1.18
SPECC1-216ENST00000581973 NWD2Q9ULI1 1742 aa22.41■■□□□ 1.18
SPECC1-216ENST00000581973 ATP7BP35670 1465 aa22.41■■□□□ 1.18
SPECC1-216ENST00000581973 ALS2Q96Q42 1657 aa22.4■■□□□ 1.18
SPECC1-216ENST00000581973 TONSLQ96HA7 1378 aa22.39■■□□□ 1.18
SPECC1-216ENST00000581973 PRDM11Q9NQV5 511 aa22.39■■□□□ 1.17
SPECC1-216ENST00000581973 CCDC61Q9Y6R9 512 aa22.39■■□□□ 1.17
SPECC1-216ENST00000581973 SRPK2P78362 688 aaKnown RBP22.38■■□□□ 1.17
SPECC1-216ENST00000581973 NUTM2GQ5VZR2 741 aa22.38■■□□□ 1.17
SPECC1-216ENST00000581973 TOPAZ1Q8N9V7 1692 aa22.38■■□□□ 1.17
SPECC1-216ENST00000581973 ROCK2O75116 1388 aaKnown RBP22.38■■□□□ 1.17
SPECC1-216ENST00000581973 ACEP12821 1306 aa22.37■■□□□ 1.17
SPECC1-216ENST00000581973 CENPJQ9HC77 1338 aaPredicted RBP22.37■■□□□ 1.17
SPECC1-216ENST00000581973 SF3B2Q13435 895 aaKnown RBP22.37■■□□□ 1.17
SPECC1-216ENST00000581973 ZRANB1Q9UGI0 708 aa22.37■■□□□ 1.17
SPECC1-216ENST00000581973 FAM98CQ17RN3 349 aaKnown RBP22.36■■□□□ 1.17
SPECC1-216ENST00000581973 NBPF8Q3BBV2 869 aa22.36■■□□□ 1.17
SPECC1-216ENST00000581973 KRT27Q7Z3Y8 459 aa22.36■■□□□ 1.17
SPECC1-216ENST00000581973 COL14A1Q05707 1796 aaKnown RBP22.35■■□□□ 1.17
SPECC1-216ENST00000581973 ONECUT3O60422 494 aaPredicted RBP22.34■■□□□ 1.17
SPECC1-216ENST00000581973 BRWD3Q6RI45 1802 aa22.34■■□□□ 1.17
SPECC1-216ENST00000581973 BLMP54132 1417 aaPredicted RBP22.33■■□□□ 1.17
SPECC1-216ENST00000581973 PLEKHG3A1L390 1219 aa22.33■■□□□ 1.17
SPECC1-216ENST00000581973 ZC3H6P61129 1189 aaKnown RBP22.32■■□□□ 1.16
SPECC1-216ENST00000581973 ABTB2Q8N961 1025 aa22.32■■□□□ 1.16
SPECC1-216ENST00000581973 CABP2Q9NPB3 220 aa22.32■■□□□ 1.16
SPECC1-216ENST00000581973 POLR3AO14802 1390 aaPredicted RBP22.32■■□□□ 1.16
SPECC1-216ENST00000581973 KIAA0232Q92628 1395 aa22.31■■□□□ 1.16
SPECC1-216ENST00000581973 CHRNA2Q15822 529 aa22.31■■□□□ 1.16
SPECC1-216ENST00000581973 NRAPQ86VF7 1730 aa22.31■■□□□ 1.16
SPECC1-216ENST00000581973 STRN4Q9NRL3 753 aa22.3■■□□□ 1.16
SPECC1-216ENST00000581973 PPIP5K1Q6PFW1 1433 aa22.29■■□□□ 1.16
SPECC1-216ENST00000581973 SPATA31A5Q5VU36 1347 aa22.29■■□□□ 1.16
SPECC1-216ENST00000581973 SPATA31A7Q8IWB4 1347 aa22.29■■□□□ 1.16
SPECC1-216ENST00000581973 DEFB132Q7Z7B7 95 aa22.28■■□□□ 1.16
SPECC1-216ENST00000581973 CRYBG1Q9Y4K1 1723 aa22.28■■□□□ 1.16
SPECC1-216ENST00000581973 EVA1CP58658 441 aa22.27■■□□□ 1.16
SPECC1-216ENST00000581973 NLRP13Q86W25 1043 aa22.25■■□□□ 1.15
SPECC1-216ENST00000581973 CABP1Q9NZU7 370 aa22.25■■□□□ 1.15
SPECC1-216ENST00000581973 PHRF1Q9P1Y6 1649 aaKnown RBP22.24■■□□□ 1.15
SPECC1-216ENST00000581973 PCGF6Q9BYE7 350 aa22.23■■□□□ 1.15
SPECC1-216ENST00000581973 USP35Q9P2H5 1018 aa22.23■■□□□ 1.15
SPECC1-216ENST00000581973 EVC2Q86UK5 1308 aa22.23■■□□□ 1.15
SPECC1-216ENST00000581973 ZBTB7CA1YPR0 619 aa22.22■■□□□ 1.15
SPECC1-216ENST00000581973 BAG6P46379 1132 aa22.22■■□□□ 1.15
SPECC1-216ENST00000581973 FAM182BQ5T319 152 aa22.22■■□□□ 1.15
SPECC1-216ENST00000581973 CARD11Q9BXL7 1154 aa22.22■■□□□ 1.15
SPECC1-216ENST00000581973 SPATA31A1Q5TZJ5 1347 aa22.21■■□□□ 1.15
SPECC1-216ENST00000581973 GCP02774 474 aa22.19■■□□□ 1.14
SPECC1-216ENST00000581973 NLRP6P59044 892 aa22.19■■□□□ 1.14
SPECC1-216ENST00000581973 BRD4O60885 1362 aaPredicted RBP22.18■■□□□ 1.14
SPECC1-216ENST00000581973 USP19O94966 1318 aa22.18■■□□□ 1.14
SPECC1-216ENST00000581973 NRKQ7Z2Y5 1582 aa22.16■■□□□ 1.14
SPECC1-216ENST00000581973 SBNO2Q9Y2G9 1366 aa22.16■■□□□ 1.14
SPECC1-216ENST00000581973 CLSPNQ9HAW4 1339 aa22.16■■□□□ 1.14
SPECC1-216ENST00000581973 LARP1Q6PKG0 1096 aaKnown RBP22.16■■□□□ 1.14
SPECC1-216ENST00000581973 USP6P35125 1406 aa22.15■■□□□ 1.14
SPECC1-216ENST00000581973 SSH2Q76I76 1423 aa22.15■■□□□ 1.14
SPECC1-216ENST00000581973 CPDO75976 1380 aa22.15■■□□□ 1.14
SPECC1-216ENST00000581973 AKAP12Q02952 1782 aa22.15■■□□□ 1.14
SPECC1-216ENST00000581973 THSD7AQ9UPZ6 1657 aa22.14■■□□□ 1.14
SPECC1-216ENST00000581973 EN1Q05925 392 aaPredicted RBP22.13■■□□□ 1.13
SPECC1-216ENST00000581973 PDE3BQ13370 1112 aa22.13■■□□□ 1.13
SPECC1-216ENST00000581973 TCP11L2Q8N4U5 519 aa22.13■■□□□ 1.13
SPECC1-216ENST00000581973 CAMTA1Q9Y6Y1 1673 aa22.13■■□□□ 1.13
SPECC1-216ENST00000581973 EP400Q96L91 3159 aa22.13■■□□□ 1.13
SPECC1-216ENST00000581973 FAM196AQ6ZSG2 479 aa22.12■■□□□ 1.13
SPECC1-216ENST00000581973 BARGINQ6ZT62 677 aa22.12■■□□□ 1.13
SPECC1-216ENST00000581973 ZNF692Q9BU19 519 aaPredicted RBP22.12■■□□□ 1.13
SPECC1-216ENST00000581973 TRIM37O94972 964 aa22.1■■□□□ 1.13
SPECC1-216ENST00000581973 RGPD1P0DJD0 1748 aa22.09■■□□□ 1.13
SPECC1-216ENST00000581973 PSDA5PKW4 1024 aaPredicted RBP22.08■■□□□ 1.13
SPECC1-216ENST00000581973 SOX12O15370 315 aa22.08■■□□□ 1.13
SPECC1-216ENST00000581973 THRAP3Q9Y2W1 955 aaKnown RBP22.08■■□□□ 1.13
SPECC1-216ENST00000581973 TTC21BQ7Z4L5 1316 aa22.07■■□□□ 1.12
SPECC1-216ENST00000581973 LMO7Q8WWI1 1683 aa22.07■■□□□ 1.12
SPECC1-216ENST00000581973 MON2Q7Z3U7 1717 aa22.06■■□□□ 1.12
SPECC1-216ENST00000581973 TIMELESSQ9UNS1 1208 aa22.06■■□□□ 1.12
SPECC1-216ENST00000581973 PIK3C2AO00443 1686 aa22.05■■□□□ 1.12
SPECC1-216ENST00000581973 COL5A2P05997 1499 aaPredicted RBP22.05■■□□□ 1.12
SPECC1-216ENST00000581973 AATKQ6ZMQ8 1374 aa22.05■■□□□ 1.12
SPECC1-216ENST00000581973 TOM1L2Q6ZVM7 507 aa22.05■■□□□ 1.12
SPECC1-216ENST00000581973 KTN1Q86UP2 1357 aaKnown RBP22.04■■□□□ 1.12
SPECC1-216ENST00000581973 APBA3O96018 575 aa22.04■■□□□ 1.12
SPECC1-216ENST00000581973 EZH2Q15910 746 aaKnown RBP22.04■■□□□ 1.12
SPECC1-216ENST00000581973 KCNH5Q8NCM2 988 aa22.04■■□□□ 1.12
SPECC1-216ENST00000581973 SLIT3O75094 1523 aa22.04■■□□□ 1.12
SPECC1-216ENST00000581973 CRB1P82279 1406 aa22.04■■□□□ 1.12
SPECC1-216ENST00000581973 TTC21AQ8NDW8 1320 aa22.04■■□□□ 1.12
SPECC1-216ENST00000581973 CCER1Q8TC90 406 aaPredicted RBP22.03■■□□□ 1.12
SPECC1-216ENST00000581973 TMC1Q8TDI8 760 aa22.03■■□□□ 1.12
SPECC1-216ENST00000581973 USP47Q96K76 1375 aa22.01■■□□□ 1.11
SPECC1-216ENST00000581973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.01■■□□□ 1.11
SPECC1-216ENST00000581973 CPSF1Q10570 1443 aaKnown RBP22■■□□□ 1.11
SPECC1-216ENST00000581973 ST20-MTHFSA0A0A6YYL1 179 aa22■■□□□ 1.11
SPECC1-216ENST00000581973 CSB-PGBD3P0DP91 1061 aa22■■□□□ 1.11
SPECC1-216ENST00000581973 DISP2A7MBM2 1401 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms