RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 QRICH2Q9H0J4 1663 aa32.12■■■□□ 2.73
CASC3-207ENST00000581849 VPS72Q15906 364 aa32.11■■■□□ 2.73
CASC3-207ENST00000581849 COL14A1Q05707 1796 aaKnown RBP32.09■■■□□ 2.73
CASC3-207ENST00000581849 NEUROD1Q13562 356 aa32.09■■■□□ 2.73
CASC3-207ENST00000581849 FAM83GA6ND36 823 aa32.08■■■□□ 2.73
CASC3-207ENST00000581849 PAK3O75914 559 aaPredicted RBP32.08■■■□□ 2.73
CASC3-207ENST00000581849 ACEP12821 1306 aa32.07■■■□□ 2.72
CASC3-207ENST00000581849 NRAPQ86VF7 1730 aa32.06■■■□□ 2.72
CASC3-207ENST00000581849 PLEKHG5O94827 1062 aa32.06■■■□□ 2.72
CASC3-207ENST00000581849 NBPF8Q3BBV2 869 aa32.05■■■□□ 2.72
CASC3-207ENST00000581849 SRPK2P78362 688 aaKnown RBP32.04■■■□□ 2.72
CASC3-207ENST00000581849 ROCK2O75116 1388 aaKnown RBP32.04■■■□□ 2.72
CASC3-207ENST00000581849 BRD4O60885 1362 aaPredicted RBP32.03■■■□□ 2.72
CASC3-207ENST00000581849 PPIP5K1Q6PFW1 1433 aa32.02■■■□□ 2.72
CASC3-207ENST00000581849 PHRF1Q9P1Y6 1649 aaKnown RBP32.01■■■□□ 2.72
CASC3-207ENST00000581849 ONECUT3O60422 494 aaPredicted RBP32.01■■■□□ 2.71
CASC3-207ENST00000581849 CCDC125Q86Z20 511 aa31.98■■■□□ 2.71
CASC3-207ENST00000581849 CABP2Q9NPB3 220 aa31.98■■■□□ 2.71
CASC3-207ENST00000581849 BTG4Q9NY30 223 aa31.98■■■□□ 2.71
CASC3-207ENST00000581849 TRIM26Q12899 539 aaPredicted RBP31.97■■■□□ 2.71
CASC3-207ENST00000581849 EVC2Q86UK5 1308 aa31.97■■■□□ 2.71
CASC3-207ENST00000581849 CCDC9Q9Y3X0 531 aaKnown RBP31.96■■■□□ 2.71
CASC3-207ENST00000581849 PRDM11Q9NQV5 511 aa31.95■■■□□ 2.71
CASC3-207ENST00000581849 EP400Q96L91 3159 aa31.95■■■□□ 2.7
CASC3-207ENST00000581849 BRWD3Q6RI45 1802 aa31.94■■■□□ 2.7
CASC3-207ENST00000581849 SEPT12Q8IYM1 358 aa31.93■■■□□ 2.7
CASC3-207ENST00000581849 KIAA0232Q92628 1395 aa31.92■■■□□ 2.7
CASC3-207ENST00000581849 ABTB2Q8N961 1025 aa31.91■■■□□ 2.7
CASC3-207ENST00000581849 USP19O94966 1318 aa31.91■■■□□ 2.7
CASC3-207ENST00000581849 TONSLQ96HA7 1378 aa31.91■■■□□ 2.7
CASC3-207ENST00000581849 SBNO2Q9Y2G9 1366 aa31.91■■■□□ 2.7
CASC3-207ENST00000581849 NRKQ7Z2Y5 1582 aa31.9■■■□□ 2.7
CASC3-207ENST00000581849 USP6P35125 1406 aa31.9■■■□□ 2.7
CASC3-207ENST00000581849 NLRP13Q86W25 1043 aa31.88■■■□□ 2.69
CASC3-207ENST00000581849 CABP1Q9NZU7 370 aa31.88■■■□□ 2.69
CASC3-207ENST00000581849 CPDO75976 1380 aa31.87■■■□□ 2.69
CASC3-207ENST00000581849 SPATA31A5Q5VU36 1347 aa31.87■■■□□ 2.69
CASC3-207ENST00000581849 SPATA31A7Q8IWB4 1347 aa31.87■■■□□ 2.69
CASC3-207ENST00000581849 NUTM2GQ5VZR2 741 aa31.86■■■□□ 2.69
CASC3-207ENST00000581849 BLMP54132 1417 aaPredicted RBP31.85■■■□□ 2.69
CASC3-207ENST00000581849 SSH2Q76I76 1423 aa31.84■■■□□ 2.69
CASC3-207ENST00000581849 KRT27Q7Z3Y8 459 aa31.84■■■□□ 2.69
CASC3-207ENST00000581849 ZC3H6P61129 1189 aaKnown RBP31.82■■■□□ 2.68
CASC3-207ENST00000581849 CARD11Q9BXL7 1154 aa31.82■■■□□ 2.68
CASC3-207ENST00000581849 FAM98CQ17RN3 349 aaKnown RBP31.81■■■□□ 2.68
CASC3-207ENST00000581849 THSD7AQ9UPZ6 1657 aa31.8■■■□□ 2.68
CASC3-207ENST00000581849 CHRNA2Q15822 529 aa31.8■■■□□ 2.68
CASC3-207ENST00000581849 ZNF692Q9BU19 519 aaPredicted RBP31.8■■■□□ 2.68
CASC3-207ENST00000581849 LMO7Q8WWI1 1683 aa31.8■■■□□ 2.68
CASC3-207ENST00000581849 AKAP12Q02952 1782 aa31.79■■■□□ 2.68
CASC3-207ENST00000581849 SPATA31A1Q5TZJ5 1347 aa31.78■■■□□ 2.68
CASC3-207ENST00000581849 GCP02774 474 aa31.78■■■□□ 2.68
CASC3-207ENST00000581849 SLIT3O75094 1523 aa31.78■■■□□ 2.68
CASC3-207ENST00000581849 A0A0G2JS52 829 aa31.77■■■□□ 2.68
CASC3-207ENST00000581849 MYT1Q01538 1121 aa31.77■■■□□ 2.68
CASC3-207ENST00000581849 PIK3C2AO00443 1686 aa31.75■■■□□ 2.67
CASC3-207ENST00000581849 CAMTA1Q9Y6Y1 1673 aa31.75■■■□□ 2.67
CASC3-207ENST00000581849 CPSF1Q10570 1443 aaKnown RBP31.75■■■□□ 2.67
CASC3-207ENST00000581849 NLRP6P59044 892 aa31.73■■■□□ 2.67
CASC3-207ENST00000581849 STRN4Q9NRL3 753 aa31.72■■■□□ 2.67
CASC3-207ENST00000581849 TTC21AQ8NDW8 1320 aa31.72■■■□□ 2.67
CASC3-207ENST00000581849 EVA1CP58658 441 aa31.71■■■□□ 2.67
CASC3-207ENST00000581849 SF3B2Q13435 895 aaKnown RBP31.71■■■□□ 2.67
CASC3-207ENST00000581849 TTC21BQ7Z4L5 1316 aa31.7■■■□□ 2.66
CASC3-207ENST00000581849 BARGINQ6ZT62 677 aa31.69■■■□□ 2.66
CASC3-207ENST00000581849 PUS7Q96PZ0 661 aaKnown RBP31.68■■■□□ 2.66
CASC3-207ENST00000581849 MON2Q7Z3U7 1717 aa31.68■■■□□ 2.66
CASC3-207ENST00000581849 AATKQ6ZMQ8 1374 aa31.68■■■□□ 2.66
CASC3-207ENST00000581849 COL5A2P05997 1499 aaPredicted RBP31.67■■■□□ 2.66
CASC3-207ENST00000581849 ZRANB1Q9UGI0 708 aa31.66■■■□□ 2.66
CASC3-207ENST00000581849 KTN1Q86UP2 1357 aaKnown RBP31.66■■■□□ 2.66
CASC3-207ENST00000581849 KCNH5Q8NCM2 988 aa31.64■■■□□ 2.66
CASC3-207ENST00000581849 THRAP3Q9Y2W1 955 aaKnown RBP31.64■■■□□ 2.66
CASC3-207ENST00000581849 SLC24A1O60721 1099 aa31.63■■■□□ 2.65
CASC3-207ENST00000581849 LARP1Q6PKG0 1096 aaKnown RBP31.63■■■□□ 2.65
CASC3-207ENST00000581849 RGPD1P0DJD0 1748 aa31.63■■■□□ 2.65
CASC3-207ENST00000581849 TCP11L2Q8N4U5 519 aa31.62■■■□□ 2.65
CASC3-207ENST00000581849 COL18A1P39060 1754 aa31.61■■■□□ 2.65
CASC3-207ENST00000581849 CD163L1Q9NR16 1453 aa31.6■■■□□ 2.65
CASC3-207ENST00000581849 DEFB132Q7Z7B7 95 aa31.6■■■□□ 2.65
CASC3-207ENST00000581849 USP54Q70EL1 1684 aa31.6■■■□□ 2.65
CASC3-207ENST00000581849 CRB1P82279 1406 aa31.59■■■□□ 2.65
CASC3-207ENST00000581849 USP35Q9P2H5 1018 aa31.59■■■□□ 2.65
CASC3-207ENST00000581849 BAG6P46379 1132 aa31.58■■■□□ 2.65
CASC3-207ENST00000581849 USP31Q70CQ4 1352 aa31.57■■■□□ 2.64
CASC3-207ENST00000581849 ABCC6O95255 1503 aa31.56■■■□□ 2.64
CASC3-207ENST00000581849 ARHGEF25Q86VW2 580 aa31.56■■■□□ 2.64
CASC3-207ENST00000581849 NINLQ9Y2I6 1382 aa31.56■■■□□ 2.64
CASC3-207ENST00000581849 NFAT5O94916 1531 aa31.55■■■□□ 2.64
CASC3-207ENST00000581849 FAM196AQ6ZSG2 479 aa31.55■■■□□ 2.64
CASC3-207ENST00000581849 HDGFL2Q7Z4V5 671 aaPredicted RBP31.55■■■□□ 2.64
CASC3-207ENST00000581849 TESK2Q96S53 571 aa31.55■■■□□ 2.64
CASC3-207ENST00000581849 DISP2A7MBM2 1401 aa31.55■■■□□ 2.64
CASC3-207ENST00000581849 PARP4Q9UKK3 1724 aaKnown RBP31.55■■■□□ 2.64
CASC3-207ENST00000581849 CLSPNQ9HAW4 1339 aa31.53■■■□□ 2.64
CASC3-207ENST00000581849 EDC4Q6P2E9 1401 aaKnown RBP31.53■■■□□ 2.64
CASC3-207ENST00000581849 TMC1Q8TDI8 760 aa31.53■■■□□ 2.64
CASC3-207ENST00000581849 TERF2IPQ9NYB0 399 aa31.53■■■□□ 2.64
CASC3-207ENST00000581849 TNS1Q9HBL0 1735 aaKnown RBP31.52■■■□□ 2.64
CASC3-207ENST00000581849 ST20-MTHFSA0A0A6YYL1 179 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms