RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TRPM1Q7Z4N2 1603 aa30.14■■■□□ 2.41
CCDC42-203ENST00000581598 NRAPQ86VF7 1730 aa30.13■■■□□ 2.41
CCDC42-203ENST00000581598 COL14A1Q05707 1796 aaKnown RBP30.13■■■□□ 2.41
CCDC42-203ENST00000581598 PLEKHG3A1L390 1219 aa30.13■■■□□ 2.41
CCDC42-203ENST00000581598 SIN3AQ96ST3 1273 aa30.13■■■□□ 2.41
CCDC42-203ENST00000581598 PLEKHG5O94827 1062 aa30.12■■■□□ 2.41
CCDC42-203ENST00000581598 QRICH2Q9H0J4 1663 aa30.11■■■□□ 2.41
CCDC42-203ENST00000581598 PAK3O75914 559 aaPredicted RBP30.1■■■□□ 2.41
CCDC42-203ENST00000581598 ACEP12821 1306 aa30.09■■■□□ 2.41
CCDC42-203ENST00000581598 ONECUT3O60422 494 aaPredicted RBP30.08■■■□□ 2.41
CCDC42-203ENST00000581598 BRWD3Q6RI45 1802 aa30.08■■■□□ 2.41
CCDC42-203ENST00000581598 NBPF8Q3BBV2 869 aa30.07■■■□□ 2.4
CCDC42-203ENST00000581598 CCDC125Q86Z20 511 aa30.06■■■□□ 2.4
CCDC42-203ENST00000581598 PHRF1Q9P1Y6 1649 aaKnown RBP30.05■■■□□ 2.4
CCDC42-203ENST00000581598 NEUROD1Q13562 356 aa30.04■■■□□ 2.4
CCDC42-203ENST00000581598 SRPK2P78362 688 aaKnown RBP30.03■■■□□ 2.4
CCDC42-203ENST00000581598 BTG4Q9NY30 223 aa30.03■■■□□ 2.4
CCDC42-203ENST00000581598 PPIP5K1Q6PFW1 1433 aa30.03■■■□□ 2.4
CCDC42-203ENST00000581598 SRCAPQ6ZRS2 3230 aa30.01■■■□□ 2.4
CCDC42-203ENST00000581598 SEPT12Q8IYM1 358 aa30.01■■■□□ 2.39
CCDC42-203ENST00000581598 CCDC9Q9Y3X0 531 aaKnown RBP30.01■■■□□ 2.39
CCDC42-203ENST00000581598 BRD4O60885 1362 aaPredicted RBP30.01■■■□□ 2.39
CCDC42-203ENST00000581598 CABP2Q9NPB3 220 aa29.99■■■□□ 2.39
CCDC42-203ENST00000581598 EP400Q96L91 3159 aa29.99■■■□□ 2.39
CCDC42-203ENST00000581598 ROCK2O75116 1388 aaKnown RBP29.99■■■□□ 2.39
CCDC42-203ENST00000581598 PRDM11Q9NQV5 511 aa29.98■■■□□ 2.39
CCDC42-203ENST00000581598 KIAA0232Q92628 1395 aa29.96■■■□□ 2.39
CCDC42-203ENST00000581598 BLMP54132 1417 aaPredicted RBP29.95■■■□□ 2.38
CCDC42-203ENST00000581598 EVC2Q86UK5 1308 aa29.95■■■□□ 2.38
CCDC42-203ENST00000581598 NRKQ7Z2Y5 1582 aa29.94■■■□□ 2.38
CCDC42-203ENST00000581598 USP19O94966 1318 aa29.94■■■□□ 2.38
CCDC42-203ENST00000581598 SPATA31A5Q5VU36 1347 aa29.94■■■□□ 2.38
CCDC42-203ENST00000581598 SPATA31A7Q8IWB4 1347 aa29.94■■■□□ 2.38
CCDC42-203ENST00000581598 ABTB2Q8N961 1025 aa29.93■■■□□ 2.38
CCDC42-203ENST00000581598 NUTM2GQ5VZR2 741 aa29.92■■■□□ 2.38
CCDC42-203ENST00000581598 KRT27Q7Z3Y8 459 aa29.91■■■□□ 2.38
CCDC42-203ENST00000581598 USP6P35125 1406 aa29.9■■■□□ 2.38
CCDC42-203ENST00000581598 CABP1Q9NZU7 370 aa29.9■■■□□ 2.38
CCDC42-203ENST00000581598 CPDO75976 1380 aa29.9■■■□□ 2.38
CCDC42-203ENST00000581598 FAM98CQ17RN3 349 aaKnown RBP29.89■■■□□ 2.38
CCDC42-203ENST00000581598 NLRP13Q86W25 1043 aa29.89■■■□□ 2.38
CCDC42-203ENST00000581598 THSD7AQ9UPZ6 1657 aa29.88■■■□□ 2.37
CCDC42-203ENST00000581598 ZC3H6P61129 1189 aaKnown RBP29.88■■■□□ 2.37
CCDC42-203ENST00000581598 PCGF6Q9BYE7 350 aa29.87■■■□□ 2.37
CCDC42-203ENST00000581598 SSH2Q76I76 1423 aa29.87■■■□□ 2.37
CCDC42-203ENST00000581598 LMO7Q8WWI1 1683 aa29.86■■■□□ 2.37
CCDC42-203ENST00000581598 CHRNA2Q15822 529 aa29.86■■■□□ 2.37
CCDC42-203ENST00000581598 SBNO2Q9Y2G9 1366 aa29.86■■■□□ 2.37
CCDC42-203ENST00000581598 SPATA31A1Q5TZJ5 1347 aa29.84■■■□□ 2.37
CCDC42-203ENST00000581598 AKAP12Q02952 1782 aa29.83■■■□□ 2.37
CCDC42-203ENST00000581598 TONSLQ96HA7 1378 aa29.83■■■□□ 2.37
CCDC42-203ENST00000581598 A0A0G2JS52 829 aa29.82■■■□□ 2.36
CCDC42-203ENST00000581598 GCP02774 474 aa29.82■■■□□ 2.36
CCDC42-203ENST00000581598 MYT1Q01538 1121 aa29.82■■■□□ 2.36
CCDC42-203ENST00000581598 CAMTA1Q9Y6Y1 1673 aa29.82■■■□□ 2.36
CCDC42-203ENST00000581598 SLIT3O75094 1523 aa29.81■■■□□ 2.36
CCDC42-203ENST00000581598 ZNF692Q9BU19 519 aaPredicted RBP29.81■■■□□ 2.36
CCDC42-203ENST00000581598 PIK3C2AO00443 1686 aa29.79■■■□□ 2.36
CCDC42-203ENST00000581598 SF3B2Q13435 895 aaKnown RBP29.79■■■□□ 2.36
CCDC42-203ENST00000581598 ZRANB1Q9UGI0 708 aa29.79■■■□□ 2.36
CCDC42-203ENST00000581598 CARD11Q9BXL7 1154 aa29.78■■■□□ 2.36
CCDC42-203ENST00000581598 STRN4Q9NRL3 753 aa29.78■■■□□ 2.36
CCDC42-203ENST00000581598 NLRP6P59044 892 aa29.76■■■□□ 2.35
CCDC42-203ENST00000581598 CPSF1Q10570 1443 aaKnown RBP29.76■■■□□ 2.35
CCDC42-203ENST00000581598 EVA1CP58658 441 aa29.75■■■□□ 2.35
CCDC42-203ENST00000581598 BARGINQ6ZT62 677 aa29.75■■■□□ 2.35
CCDC42-203ENST00000581598 RGPD1P0DJD0 1748 aa29.74■■■□□ 2.35
CCDC42-203ENST00000581598 DEFB132Q7Z7B7 95 aa29.73■■■□□ 2.35
CCDC42-203ENST00000581598 TTC21BQ7Z4L5 1316 aa29.72■■■□□ 2.35
CCDC42-203ENST00000581598 TTC21AQ8NDW8 1320 aa29.72■■■□□ 2.35
CCDC42-203ENST00000581598 COL5A2P05997 1499 aaPredicted RBP29.72■■■□□ 2.35
CCDC42-203ENST00000581598 MON2Q7Z3U7 1717 aa29.71■■■□□ 2.35
CCDC42-203ENST00000581598 LARP1Q6PKG0 1096 aaKnown RBP29.71■■■□□ 2.35
CCDC42-203ENST00000581598 AATKQ6ZMQ8 1374 aa29.71■■■□□ 2.35
CCDC42-203ENST00000581598 THRAP3Q9Y2W1 955 aaKnown RBP29.69■■■□□ 2.34
CCDC42-203ENST00000581598 COL18A1P39060 1754 aa29.69■■■□□ 2.34
CCDC42-203ENST00000581598 BAG6P46379 1132 aa29.68■■■□□ 2.34
CCDC42-203ENST00000581598 TCP11L2Q8N4U5 519 aa29.68■■■□□ 2.34
CCDC42-203ENST00000581598 KTN1Q86UP2 1357 aaKnown RBP29.67■■■□□ 2.34
CCDC42-203ENST00000581598 USP35Q9P2H5 1018 aa29.66■■■□□ 2.34
CCDC42-203ENST00000581598 DISP2A7MBM2 1401 aa29.65■■■□□ 2.34
CCDC42-203ENST00000581598 KCNH5Q8NCM2 988 aa29.65■■■□□ 2.34
CCDC42-203ENST00000581598 PUS7Q96PZ0 661 aaKnown RBP29.65■■■□□ 2.34
CCDC42-203ENST00000581598 TNS1Q9HBL0 1735 aaKnown RBP29.65■■■□□ 2.34
CCDC42-203ENST00000581598 CRB1P82279 1406 aa29.64■■■□□ 2.34
CCDC42-203ENST00000581598 USP54Q70EL1 1684 aa29.64■■■□□ 2.34
CCDC42-203ENST00000581598 FAM182BQ5T319 152 aa29.64■■■□□ 2.34
CCDC42-203ENST00000581598 CD163L1Q9NR16 1453 aa29.63■■■□□ 2.33
CCDC42-203ENST00000581598 PARP4Q9UKK3 1724 aaKnown RBP29.63■■■□□ 2.33
CCDC42-203ENST00000581598 FAM196AQ6ZSG2 479 aa29.63■■■□□ 2.33
CCDC42-203ENST00000581598 ARHGEF25Q86VW2 580 aa29.61■■■□□ 2.33
CCDC42-203ENST00000581598 NFAT5O94916 1531 aa29.61■■■□□ 2.33
CCDC42-203ENST00000581598 USP31Q70CQ4 1352 aa29.6■■■□□ 2.33
CCDC42-203ENST00000581598 ABCC6O95255 1503 aa29.59■■■□□ 2.33
CCDC42-203ENST00000581598 PDE3BQ13370 1112 aa29.58■■■□□ 2.33
CCDC42-203ENST00000581598 ZBTB7CA1YPR0 619 aa29.57■■■□□ 2.32
CCDC42-203ENST00000581598 SLC24A1O60721 1099 aa29.57■■■□□ 2.32
CCDC42-203ENST00000581598 AXIN2Q9Y2T1 843 aa29.56■■■□□ 2.32
CCDC42-203ENST00000581598 RGPD5Q99666 1765 aa29.55■■■□□ 2.32
CCDC42-203ENST00000581598 WDR17Q8IZU2 1322 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms