RNA–Protein interactions for RNA: ENST00000581549.1

LINC00511-213, long intergenic non-protein coding RNA 511, humanhuman

TSL 2 BASIC

Gene LINC00511, Length 2,265 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00511-213ENST00000581549 PTCH1Q13635 1447 aa18.49■□□□□ 0.55
LINC00511-213ENST00000581549 ZNF142P52746 1687 aaPredicted RBP18.48■□□□□ 0.55
LINC00511-213ENST00000581549 XRN1Q8IZH2 1706 aaKnown RBP18.48■□□□□ 0.55
LINC00511-213ENST00000581549 SPINK5Q9NQ38 1064 aaPredicted RBP18.48■□□□□ 0.55
LINC00511-213ENST00000581549 AMOTL2Q9Y2J4 779 aa18.48■□□□□ 0.55
LINC00511-213ENST00000581549 PNPLA6Q8IY17 1366 aa18.48■□□□□ 0.55
LINC00511-213ENST00000581549 DMRT2Q9Y5R5 561 aa18.47■□□□□ 0.55
LINC00511-213ENST00000581549 TCP11L2Q8N4U5 519 aa18.46■□□□□ 0.55
LINC00511-213ENST00000581549 WWC1Q8IX03 1113 aa18.46■□□□□ 0.54
LINC00511-213ENST00000581549 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.54
LINC00511-213ENST00000581549 MAP2P11137 1827 aaKnown RBP18.45■□□□□ 0.54
LINC00511-213ENST00000581549 E9PSI1 815 aa18.45■□□□□ 0.54
LINC00511-213ENST00000581549 U2AF1L5P0DN76 240 aaPredicted RBP18.45■□□□□ 0.54
LINC00511-213ENST00000581549 U2AF1Q01081 240 aaKnown RBP eCLIP18.45■□□□□ 0.54
LINC00511-213ENST00000581549 NRKQ7Z2Y5 1582 aa18.44■□□□□ 0.54
LINC00511-213ENST00000581549 NCBP3Q53F19 620 aaKnown RBP18.44■□□□□ 0.54
LINC00511-213ENST00000581549 NME9Q86XW9 330 aa18.44■□□□□ 0.54
LINC00511-213ENST00000581549 NKTRP30414 1462 aaKnown RBP18.43■□□□□ 0.54
LINC00511-213ENST00000581549 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
LINC00511-213ENST00000581549 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
LINC00511-213ENST00000581549 EXOC6Q8TAG9 804 aa18.42■□□□□ 0.54
LINC00511-213ENST00000581549 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
LINC00511-213ENST00000581549 PLEKHG3A1L390 1219 aa18.42■□□□□ 0.54
LINC00511-213ENST00000581549 CCDC27Q2M243 656 aa18.42■□□□□ 0.54
LINC00511-213ENST00000581549 PLEKHF1Q96S99 279 aa18.42■□□□□ 0.54
LINC00511-213ENST00000581549 ZRANB1Q9UGI0 708 aa18.42■□□□□ 0.54
LINC00511-213ENST00000581549 PIK3R4Q99570 1358 aa18.41■□□□□ 0.54
LINC00511-213ENST00000581549 PLIN1O60240 522 aa18.41■□□□□ 0.54
LINC00511-213ENST00000581549 AATKQ6ZMQ8 1374 aa18.4■□□□□ 0.54
LINC00511-213ENST00000581549 SETD1BQ9UPS6 1966 aaKnown RBP18.4■□□□□ 0.54
LINC00511-213ENST00000581549 DIAPH1O60610 1272 aaKnown RBP18.4■□□□□ 0.54
LINC00511-213ENST00000581549 FBLN1P23142 703 aa18.4■□□□□ 0.54
LINC00511-213ENST00000581549 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.54
LINC00511-213ENST00000581549 NEUROD2Q15784 382 aa18.39■□□□□ 0.53
LINC00511-213ENST00000581549 CCDC136Q96JN2 1154 aa18.39■□□□□ 0.53
LINC00511-213ENST00000581549 ACEP12821 1306 aa18.38■□□□□ 0.53
LINC00511-213ENST00000581549 WDR63Q8IWG1 891 aa18.38■□□□□ 0.53
LINC00511-213ENST00000581549 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
LINC00511-213ENST00000581549 COG3Q96JB2 828 aa18.37■□□□□ 0.53
LINC00511-213ENST00000581549 CHD2O14647 1828 aaKnown RBP18.37■□□□□ 0.53
LINC00511-213ENST00000581549 USP6P35125 1406 aa18.37■□□□□ 0.53
LINC00511-213ENST00000581549 NUTM2FA1L443 756 aa18.37■□□□□ 0.53
LINC00511-213ENST00000581549 CDK12Q9NYV4 1490 aaPredicted RBP18.37■□□□□ 0.53
LINC00511-213ENST00000581549 TTC21BQ7Z4L5 1316 aa18.36■□□□□ 0.53
LINC00511-213ENST00000581549 KCNA6P17658 529 aa18.36■□□□□ 0.53
LINC00511-213ENST00000581549 ANKLE2Q86XL3 938 aa18.36■□□□□ 0.53
LINC00511-213ENST00000581549 SSH2Q76I76 1423 aa18.35■□□□□ 0.53
LINC00511-213ENST00000581549 EMILIN1Q9Y6C2 1016 aa18.35■□□□□ 0.53
LINC00511-213ENST00000581549 CRBNQ96SW2 442 aa18.34■□□□□ 0.53
LINC00511-213ENST00000581549 NALCNQ8IZF0 1738 aa18.34■□□□□ 0.53
LINC00511-213ENST00000581549 C20orf194Q5TEA3 1177 aa18.34■□□□□ 0.53
LINC00511-213ENST00000581549 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.53
LINC00511-213ENST00000581549 FMN2Q9NZ56 1722 aa18.33■□□□□ 0.53
LINC00511-213ENST00000581549 OVOS2A0A0J9YW53 1432 aa18.33■□□□□ 0.53
LINC00511-213ENST00000581549 OVOS2Q6IE36 1432 aa18.33■□□□□ 0.53
LINC00511-213ENST00000581549 TMPOP42166 694 aaKnown RBP18.33■□□□□ 0.53
LINC00511-213ENST00000581549 PPM1GO15355 546 aaPredicted RBP18.33■□□□□ 0.52
LINC00511-213ENST00000581549 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
LINC00511-213ENST00000581549 FCHSD2O94868 740 aa18.32■□□□□ 0.52
LINC00511-213ENST00000581549 IL13P35225 146 aa18.32■□□□□ 0.52
LINC00511-213ENST00000581549 PNNQ9H307 717 aaKnown RBP18.32■□□□□ 0.52
LINC00511-213ENST00000581549 MAPK8IP3Q9UPT6 1336 aa18.31■□□□□ 0.52
LINC00511-213ENST00000581549 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.3■□□□□ 0.52
LINC00511-213ENST00000581549 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
LINC00511-213ENST00000581549 TRIM35Q9UPQ4 493 aa18.3■□□□□ 0.52
LINC00511-213ENST00000581549 BCAR3O75815 825 aa18.29■□□□□ 0.52
LINC00511-213ENST00000581549 RRS1Q15050 365 aaKnown RBP18.29■□□□□ 0.52
LINC00511-213ENST00000581549 PMFBP1Q8TBY8 1022 aa18.29■□□□□ 0.52
LINC00511-213ENST00000581549 USP31Q70CQ4 1352 aa18.28■□□□□ 0.52
LINC00511-213ENST00000581549 TTC21AQ8NDW8 1320 aa18.28■□□□□ 0.52
LINC00511-213ENST00000581549 MYH16Q9H6N6 1097 aa18.26■□□□□ 0.51
LINC00511-213ENST00000581549 NPHP4O75161 1426 aaPredicted RBP18.26■□□□□ 0.51
LINC00511-213ENST00000581549 PEAK1Q9H792 1746 aa18.26■□□□□ 0.51
LINC00511-213ENST00000581549 PRKAR2BP31323 418 aa18.26■□□□□ 0.51
LINC00511-213ENST00000581549 RBM19Q9Y4C8 960 aaKnown RBP18.26■□□□□ 0.51
LINC00511-213ENST00000581549 RIPK4P57078 832 aa18.25■□□□□ 0.51
LINC00511-213ENST00000581549 PIK3C2AO00443 1686 aa18.25■□□□□ 0.51
LINC00511-213ENST00000581549 IL16Q14005 1332 aa18.24■□□□□ 0.51
LINC00511-213ENST00000581549 NGDNQ8NEJ9 315 aaKnown RBP18.24■□□□□ 0.51
LINC00511-213ENST00000581549 HMOX1P09601 288 aa18.24■□□□□ 0.51
LINC00511-213ENST00000581549 RARSP54136 660 aaKnown RBP18.24■□□□□ 0.51
LINC00511-213ENST00000581549 PHACTR3Q96KR7 559 aa18.23■□□□□ 0.51
LINC00511-213ENST00000581549 FANCIQ9NVI1 1328 aa18.22■□□□□ 0.51
LINC00511-213ENST00000581549 USP54Q70EL1 1684 aa18.22■□□□□ 0.51
LINC00511-213ENST00000581549 MARF1Q9Y4F3 1742 aaKnown RBP18.21■□□□□ 0.51
LINC00511-213ENST00000581549 NFE2L2Q16236 605 aa18.21■□□□□ 0.51
LINC00511-213ENST00000581549 NWD1Q149M9 1564 aa18.2■□□□□ 0.5
LINC00511-213ENST00000581549 RGPD1P0DJD0 1748 aa18.2■□□□□ 0.5
LINC00511-213ENST00000581549 EIF4A2Q14240 407 aaKnown RBP18.2■□□□□ 0.5
LINC00511-213ENST00000581549 TSR2Q969E8 191 aaKnown RBP18.2■□□□□ 0.5
LINC00511-213ENST00000581549 ADGRL3Q9HAR2 1447 aa18.2■□□□□ 0.5
LINC00511-213ENST00000581549 DLG5Q8TDM6 1919 aa18.19■□□□□ 0.5
LINC00511-213ENST00000581549 NEFMP07197 916 aa18.19■□□□□ 0.5
LINC00511-213ENST00000581549 PDE3AQ14432 1141 aa18.19■□□□□ 0.5
LINC00511-213ENST00000581549 CT47B1P0C2W7 299 aaPredicted RBP18.19■□□□□ 0.5
LINC00511-213ENST00000581549 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
LINC00511-213ENST00000581549 EXOSC9Q06265 439 aaKnown RBP18.16■□□□□ 0.5
LINC00511-213ENST00000581549 MAP3K19Q56UN5 1328 aa18.16■□□□□ 0.5
LINC00511-213ENST00000581549 KDM2BQ8NHM5 1336 aa18.16■□□□□ 0.5
LINC00511-213ENST00000581549 HSP90AB2PQ58FF8 381 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms