RNA–Protein interactions for RNA: ENST00000581416.5

ATG13-227, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-227ENST00000581416 POLR3AO14802 1390 aaPredicted RBP22.91■■□□□ 1.26
ATG13-227ENST00000581416 NRKQ7Z2Y5 1582 aa22.89■■□□□ 1.26
ATG13-227ENST00000581416 AKAP12Q02952 1782 aa22.89■■□□□ 1.26
ATG13-227ENST00000581416 FAM83GA6ND36 823 aa22.88■■□□□ 1.25
ATG13-227ENST00000581416 NGDNQ8NEJ9 315 aaKnown RBP22.88■■□□□ 1.25
ATG13-227ENST00000581416 ATAD2Q6PL18 1390 aa22.88■■□□□ 1.25
ATG13-227ENST00000581416 CENPJQ9HC77 1338 aaPredicted RBP22.87■■□□□ 1.25
ATG13-227ENST00000581416 HAP1P54257 671 aaPredicted RBP22.86■■□□□ 1.25
ATG13-227ENST00000581416 NEUROD1Q13562 356 aa22.86■■□□□ 1.25
ATG13-227ENST00000581416 ACEP12821 1306 aa22.85■■□□□ 1.25
ATG13-227ENST00000581416 PPIP5K1Q6PFW1 1433 aa22.84■■□□□ 1.25
ATG13-227ENST00000581416 PLEKHG3A1L390 1219 aa22.84■■□□□ 1.25
ATG13-227ENST00000581416 LMO7Q8WWI1 1683 aa22.84■■□□□ 1.25
ATG13-227ENST00000581416 VPS72Q15906 364 aa22.83■■□□□ 1.25
ATG13-227ENST00000581416 NBPF8Q3BBV2 869 aa22.83■■□□□ 1.25
ATG13-227ENST00000581416 CCDC61Q9Y6R9 512 aa22.83■■□□□ 1.25
ATG13-227ENST00000581416 PIK3C2AO00443 1686 aa22.83■■□□□ 1.24
ATG13-227ENST00000581416 THSD7AQ9UPZ6 1657 aa22.83■■□□□ 1.24
ATG13-227ENST00000581416 PAK3O75914 559 aaPredicted RBP22.82■■□□□ 1.24
ATG13-227ENST00000581416 CABP2Q9NPB3 220 aa22.81■■□□□ 1.24
ATG13-227ENST00000581416 ROCK2O75116 1388 aaKnown RBP22.78■■□□□ 1.24
ATG13-227ENST00000581416 MON2Q7Z3U7 1717 aa22.78■■□□□ 1.24
ATG13-227ENST00000581416 BTG4Q9NY30 223 aa22.78■■□□□ 1.24
ATG13-227ENST00000581416 KIAA0232Q92628 1395 aa22.77■■□□□ 1.24
ATG13-227ENST00000581416 SRPK2P78362 688 aaKnown RBP22.77■■□□□ 1.24
ATG13-227ENST00000581416 NUTM2GQ5VZR2 741 aa22.77■■□□□ 1.24
ATG13-227ENST00000581416 ONECUT3O60422 494 aaPredicted RBP22.76■■□□□ 1.23
ATG13-227ENST00000581416 SEPT12Q8IYM1 358 aa22.75■■□□□ 1.23
ATG13-227ENST00000581416 COL18A1P39060 1754 aa22.75■■□□□ 1.23
ATG13-227ENST00000581416 RGPD5Q99666 1765 aa22.75■■□□□ 1.23
ATG13-227ENST00000581416 USP6P35125 1406 aa22.74■■□□□ 1.23
ATG13-227ENST00000581416 SSH2Q76I76 1423 aa22.74■■□□□ 1.23
ATG13-227ENST00000581416 USP19O94966 1318 aa22.74■■□□□ 1.23
ATG13-227ENST00000581416 CAMTA1Q9Y6Y1 1673 aa22.74■■□□□ 1.23
ATG13-227ENST00000581416 SLIT3O75094 1523 aa22.73■■□□□ 1.23
ATG13-227ENST00000581416 TNS1Q9HBL0 1735 aaKnown RBP22.73■■□□□ 1.23
ATG13-227ENST00000581416 CHRNA2Q15822 529 aa22.72■■□□□ 1.23
ATG13-227ENST00000581416 CCDC9Q9Y3X0 531 aaKnown RBP22.72■■□□□ 1.23
ATG13-227ENST00000581416 WNK3Q9BYP7 1800 aa22.71■■□□□ 1.23
ATG13-227ENST00000581416 PRDM11Q9NQV5 511 aa22.71■■□□□ 1.23
ATG13-227ENST00000581416 CABP1Q9NZU7 370 aa22.7■■□□□ 1.22
ATG13-227ENST00000581416 SPATA31A5Q5VU36 1347 aa22.7■■□□□ 1.22
ATG13-227ENST00000581416 SPATA31A7Q8IWB4 1347 aa22.7■■□□□ 1.22
ATG13-227ENST00000581416 USP54Q70EL1 1684 aa22.7■■□□□ 1.22
ATG13-227ENST00000581416 RGPD1P0DJD0 1748 aa22.7■■□□□ 1.22
ATG13-227ENST00000581416 ZC3H6P61129 1189 aaKnown RBP22.69■■□□□ 1.22
ATG13-227ENST00000581416 BLMP54132 1417 aaPredicted RBP22.68■■□□□ 1.22
ATG13-227ENST00000581416 CPDO75976 1380 aa22.68■■□□□ 1.22
ATG13-227ENST00000581416 EVC2Q86UK5 1308 aa22.68■■□□□ 1.22
ATG13-227ENST00000581416 FAM98CQ17RN3 349 aaKnown RBP22.68■■□□□ 1.22
ATG13-227ENST00000581416 ABTB2Q8N961 1025 aa22.68■■□□□ 1.22
ATG13-227ENST00000581416 SBNO2Q9Y2G9 1366 aa22.67■■□□□ 1.22
ATG13-227ENST00000581416 TRIM26Q12899 539 aaPredicted RBP22.67■■□□□ 1.22
ATG13-227ENST00000581416 BRD4O60885 1362 aaPredicted RBP22.66■■□□□ 1.22
ATG13-227ENST00000581416 TONSLQ96HA7 1378 aa22.65■■□□□ 1.22
ATG13-227ENST00000581416 PARP4Q9UKK3 1724 aaKnown RBP22.65■■□□□ 1.22
ATG13-227ENST00000581416 SPATA31A1Q5TZJ5 1347 aa22.64■■□□□ 1.22
ATG13-227ENST00000581416 KRT27Q7Z3Y8 459 aa22.64■■□□□ 1.21
ATG13-227ENST00000581416 CD163L1Q9NR16 1453 aa22.64■■□□□ 1.21
ATG13-227ENST00000581416 CPSF1Q10570 1443 aaKnown RBP22.64■■□□□ 1.21
ATG13-227ENST00000581416 CCDC125Q86Z20 511 aa22.63■■□□□ 1.21
ATG13-227ENST00000581416 COL5A2P05997 1499 aaPredicted RBP22.62■■□□□ 1.21
ATG13-227ENST00000581416 LTN1O94822 1766 aa22.62■■□□□ 1.21
ATG13-227ENST00000581416 NFAT5O94916 1531 aa22.62■■□□□ 1.21
ATG13-227ENST00000581416 GCP02774 474 aa22.6■■□□□ 1.21
ATG13-227ENST00000581416 DEFB132Q7Z7B7 95 aa22.6■■□□□ 1.21
ATG13-227ENST00000581416 NLRP13Q86W25 1043 aa22.6■■□□□ 1.21
ATG13-227ENST00000581416 STRN4Q9NRL3 753 aa22.6■■□□□ 1.21
ATG13-227ENST00000581416 FAM182BQ5T319 152 aa22.59■■□□□ 1.21
ATG13-227ENST00000581416 CARD11Q9BXL7 1154 aa22.59■■□□□ 1.21
ATG13-227ENST00000581416 SRCAPQ6ZRS2 3230 aa22.59■■□□□ 1.21
ATG13-227ENST00000581416 LRRC37A3O60309 1634 aa22.58■■□□□ 1.21
ATG13-227ENST00000581416 A0A0G2JS52 829 aa22.58■■□□□ 1.21
ATG13-227ENST00000581416 MYT1Q01538 1121 aa22.58■■□□□ 1.21
ATG13-227ENST00000581416 SBF2Q86WG5 1849 aa22.58■■□□□ 1.21
ATG13-227ENST00000581416 TTC21BQ7Z4L5 1316 aa22.57■■□□□ 1.2
ATG13-227ENST00000581416 LARP1Q6PKG0 1096 aaKnown RBP22.57■■□□□ 1.2
ATG13-227ENST00000581416 PEAK1Q9H792 1746 aa22.57■■□□□ 1.2
ATG13-227ENST00000581416 NLRP6P59044 892 aa22.56■■□□□ 1.2
ATG13-227ENST00000581416 AATKQ6ZMQ8 1374 aa22.53■■□□□ 1.2
ATG13-227ENST00000581416 KTN1Q86UP2 1357 aaKnown RBP22.53■■□□□ 1.2
ATG13-227ENST00000581416 RREB1Q92766 1687 aa22.52■■□□□ 1.2
ATG13-227ENST00000581416 USP35Q9P2H5 1018 aa22.52■■□□□ 1.2
ATG13-227ENST00000581416 BARGINQ6ZT62 677 aa22.51■■□□□ 1.19
ATG13-227ENST00000581416 ZNF692Q9BU19 519 aaPredicted RBP22.51■■□□□ 1.19
ATG13-227ENST00000581416 TTC21AQ8NDW8 1320 aa22.51■■□□□ 1.19
ATG13-227ENST00000581416 TESK2Q96S53 571 aa22.5■■□□□ 1.19
ATG13-227ENST00000581416 ZRANB1Q9UGI0 708 aa22.5■■□□□ 1.19
ATG13-227ENST00000581416 CRB1P82279 1406 aa22.49■■□□□ 1.19
ATG13-227ENST00000581416 NUP188Q5SRE5 1749 aa22.49■■□□□ 1.19
ATG13-227ENST00000581416 ABCC6O95255 1503 aa22.49■■□□□ 1.19
ATG13-227ENST00000581416 EVA1CP58658 441 aa22.49■■□□□ 1.19
ATG13-227ENST00000581416 AXIN2Q9Y2T1 843 aa22.49■■□□□ 1.19
ATG13-227ENST00000581416 DISP2A7MBM2 1401 aa22.48■■□□□ 1.19
ATG13-227ENST00000581416 ZBTB7CA1YPR0 619 aa22.47■■□□□ 1.19
ATG13-227ENST00000581416 A0A1W2PP64 1363 aa22.47■■□□□ 1.19
ATG13-227ENST00000581416 USP31Q70CQ4 1352 aa22.47■■□□□ 1.19
ATG13-227ENST00000581416 MYOM1P52179 1685 aa22.46■■□□□ 1.19
ATG13-227ENST00000581416 ARHGEF25Q86VW2 580 aa22.46■■□□□ 1.19
ATG13-227ENST00000581416 TCP11L2Q8N4U5 519 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms