RNA–Protein interactions for RNA: ENST00000581391.5

CUEDC1-209, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-209ENST00000581391 USP21Q9UK80 565 aa19.22■□□□□ 0.67
CUEDC1-209ENST00000581391 USP47Q96K76 1375 aa19.21■□□□□ 0.67
CUEDC1-209ENST00000581391 SOCS7O14512 581 aa19.21■□□□□ 0.67
CUEDC1-209ENST00000581391 FNBP4Q8N3X1 1017 aaPredicted RBP19.21■□□□□ 0.67
CUEDC1-209ENST00000581391 SBNO2Q9Y2G9 1366 aa19.2■□□□□ 0.66
CUEDC1-209ENST00000581391 FAM83GA6ND36 823 aa19.2■□□□□ 0.66
CUEDC1-209ENST00000581391 TMC1Q8TDI8 760 aa19.2■□□□□ 0.66
CUEDC1-209ENST00000581391 SLC12A5Q9H2X9 1139 aa19.2■□□□□ 0.66
CUEDC1-209ENST00000581391 ABTB2Q8N961 1025 aa19.19■□□□□ 0.66
CUEDC1-209ENST00000581391 MARF1Q9Y4F3 1742 aaKnown RBP19.19■□□□□ 0.66
CUEDC1-209ENST00000581391 RXRBP28702 533 aa19.18■□□□□ 0.66
CUEDC1-209ENST00000581391 ABCA3Q99758 1704 aa19.17■□□□□ 0.66
CUEDC1-209ENST00000581391 BCL9LQ86UU0 1499 aa19.16■□□□□ 0.66
CUEDC1-209ENST00000581391 ATAD2Q6PL18 1390 aa19.16■□□□□ 0.66
CUEDC1-209ENST00000581391 USP6P35125 1406 aa19.16■□□□□ 0.66
CUEDC1-209ENST00000581391 ZC3H6P61129 1189 aaKnown RBP19.15■□□□□ 0.66
CUEDC1-209ENST00000581391 CHRNA2Q15822 529 aa19.14■□□□□ 0.65
CUEDC1-209ENST00000581391 ZRANB1Q9UGI0 708 aa19.14■□□□□ 0.65
CUEDC1-209ENST00000581391 SSH2Q76I76 1423 aa19.14■□□□□ 0.65
CUEDC1-209ENST00000581391 TRPC5Q9UL62 973 aaPredicted RBP19.13■□□□□ 0.65
CUEDC1-209ENST00000581391 TTC21BQ7Z4L5 1316 aa19.13■□□□□ 0.65
CUEDC1-209ENST00000581391 CRYBG1Q9Y4K1 1723 aa19.13■□□□□ 0.65
CUEDC1-209ENST00000581391 SLIT2O94813 1529 aa19.12■□□□□ 0.65
CUEDC1-209ENST00000581391 CD163L1Q9NR16 1453 aa19.12■□□□□ 0.65
CUEDC1-209ENST00000581391 CPSF1Q10570 1443 aaKnown RBP19.12■□□□□ 0.65
CUEDC1-209ENST00000581391 NLRP6P59044 892 aa19.12■□□□□ 0.65
CUEDC1-209ENST00000581391 RBM6P78332 1123 aaKnown RBP19.12■□□□□ 0.65
CUEDC1-209ENST00000581391 UNC5CLQ8IV45 518 aa19.12■□□□□ 0.65
CUEDC1-209ENST00000581391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.12■□□□□ 0.65
CUEDC1-209ENST00000581391 ZNF692Q9BU19 519 aaPredicted RBP19.12■□□□□ 0.65
CUEDC1-209ENST00000581391 AKAP12Q02952 1782 aa19.11■□□□□ 0.65
CUEDC1-209ENST00000581391 KTN1Q86UP2 1357 aaKnown RBP19.11■□□□□ 0.65
CUEDC1-209ENST00000581391 ATRNO75882 1429 aa19.1■□□□□ 0.65
CUEDC1-209ENST00000581391 KIAA0232Q92628 1395 aa19.1■□□□□ 0.65
CUEDC1-209ENST00000581391 HSPA5P11021 654 aaKnown RBP19.1■□□□□ 0.65
CUEDC1-209ENST00000581391 TMF1P82094 1093 aa19.1■□□□□ 0.65
CUEDC1-209ENST00000581391 NLRP13Q86W25 1043 aa19.1■□□□□ 0.65
CUEDC1-209ENST00000581391 BTG4Q9NY30 223 aa19.1■□□□□ 0.65
CUEDC1-209ENST00000581391 GCP02774 474 aa19.09■□□□□ 0.65
CUEDC1-209ENST00000581391 PRDM11Q9NQV5 511 aa19.09■□□□□ 0.65
CUEDC1-209ENST00000581391 USP19O94966 1318 aa19.08■□□□□ 0.65
CUEDC1-209ENST00000581391 SOX12O15370 315 aa19.08■□□□□ 0.64
CUEDC1-209ENST00000581391 PUS7Q96PZ0 661 aaKnown RBP19.08■□□□□ 0.64
CUEDC1-209ENST00000581391 PHRF1Q9P1Y6 1649 aaKnown RBP19.07■□□□□ 0.64
CUEDC1-209ENST00000581391 ZBTB7CA1YPR0 619 aa19.07■□□□□ 0.64
CUEDC1-209ENST00000581391 NME9Q86XW9 330 aa19.07■□□□□ 0.64
CUEDC1-209ENST00000581391 GJD4Q96KN9 370 aaPredicted RBP19.07■□□□□ 0.64
CUEDC1-209ENST00000581391 PIK3C2AO00443 1686 aa19.07■□□□□ 0.64
CUEDC1-209ENST00000581391 PLCH1Q4KWH8 1693 aa19.07■□□□□ 0.64
CUEDC1-209ENST00000581391 A0A1W2PP64 1363 aa19.06■□□□□ 0.64
CUEDC1-209ENST00000581391 HDGFL2Q7Z4V5 671 aaPredicted RBP19.06■□□□□ 0.64
CUEDC1-209ENST00000581391 CCDC9Q9Y3X0 531 aaKnown RBP19.06■□□□□ 0.64
CUEDC1-209ENST00000581391 BRD4O60885 1362 aaPredicted RBP19.06■□□□□ 0.64
CUEDC1-209ENST00000581391 EIF4G2P78344 907 aaKnown RBP eCLIP19.05■□□□□ 0.64
CUEDC1-209ENST00000581391 POLR3GLQ9BT43 218 aa19.05■□□□□ 0.64
CUEDC1-209ENST00000581391 RGS12O14924 1447 aa19.05■□□□□ 0.64
CUEDC1-209ENST00000581391 MON2Q7Z3U7 1717 aa19.04■□□□□ 0.64
CUEDC1-209ENST00000581391 TERF2IPQ9NYB0 399 aa19.04■□□□□ 0.64
CUEDC1-209ENST00000581391 NRKQ7Z2Y5 1582 aa19.03■□□□□ 0.64
CUEDC1-209ENST00000581391 C11orf95C9JLR9 678 aaPredicted RBP19.03■□□□□ 0.64
CUEDC1-209ENST00000581391 VPS72Q15906 364 aa19.03■□□□□ 0.64
CUEDC1-209ENST00000581391 STRN4Q9NRL3 753 aa19.03■□□□□ 0.64
CUEDC1-209ENST00000581391 TTC21AQ8NDW8 1320 aa19.02■□□□□ 0.64
CUEDC1-209ENST00000581391 COL14A1Q05707 1796 aaKnown RBP19.02■□□□□ 0.64
CUEDC1-209ENST00000581391 SLC24A1O60721 1099 aa19.02■□□□□ 0.64
CUEDC1-209ENST00000581391 GLI3P10071 1580 aa19.02■□□□□ 0.63
CUEDC1-209ENST00000581391 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.01■□□□□ 0.63
CUEDC1-209ENST00000581391 NWD2Q9ULI1 1742 aa19.01■□□□□ 0.63
CUEDC1-209ENST00000581391 NRAPQ86VF7 1730 aa19■□□□□ 0.63
CUEDC1-209ENST00000581391 CAMTA1Q9Y6Y1 1673 aa18.99■□□□□ 0.63
CUEDC1-209ENST00000581391 FBLN1P23142 703 aa18.99■□□□□ 0.63
CUEDC1-209ENST00000581391 AXIN2Q9Y2T1 843 aa18.99■□□□□ 0.63
CUEDC1-209ENST00000581391 SLIT3O75094 1523 aa18.99■□□□□ 0.63
CUEDC1-209ENST00000581391 CDK12Q9NYV4 1490 aaPredicted RBP18.98■□□□□ 0.63
CUEDC1-209ENST00000581391 CPDO75976 1380 aa18.98■□□□□ 0.63
CUEDC1-209ENST00000581391 CARD14Q9BXL6 1004 aa18.98■□□□□ 0.63
CUEDC1-209ENST00000581391 EDC4Q6P2E9 1401 aaKnown RBP18.98■□□□□ 0.63
CUEDC1-209ENST00000581391 EVA1CP58658 441 aa18.97■□□□□ 0.63
CUEDC1-209ENST00000581391 FAM98CQ17RN3 349 aaKnown RBP18.97■□□□□ 0.63
CUEDC1-209ENST00000581391 CDCA8Q53HL2 280 aa18.97■□□□□ 0.63
CUEDC1-209ENST00000581391 LARP1Q6PKG0 1096 aaKnown RBP18.97■□□□□ 0.63
CUEDC1-209ENST00000581391 ANKRD36BQ8N2N9 1353 aa18.96■□□□□ 0.63
CUEDC1-209ENST00000581391 ARHGEF25Q86VW2 580 aa18.96■□□□□ 0.63
CUEDC1-209ENST00000581391 SEPT12Q8IYM1 358 aa18.96■□□□□ 0.63
CUEDC1-209ENST00000581391 USP35Q9P2H5 1018 aa18.96■□□□□ 0.63
CUEDC1-209ENST00000581391 SPATA31A5Q5VU36 1347 aa18.96■□□□□ 0.63
CUEDC1-209ENST00000581391 SPATA31A7Q8IWB4 1347 aa18.96■□□□□ 0.63
CUEDC1-209ENST00000581391 USP31Q70CQ4 1352 aa18.95■□□□□ 0.62
CUEDC1-209ENST00000581391 NINLQ9Y2I6 1382 aa18.95■□□□□ 0.62
CUEDC1-209ENST00000581391 UPF1Q92900 1129 aaKnown RBP eCLIP18.94■□□□□ 0.62
CUEDC1-209ENST00000581391 GGNBP2Q9H3C7 697 aa18.94■□□□□ 0.62
CUEDC1-209ENST00000581391 MYOM1P52179 1685 aa18.93■□□□□ 0.62
CUEDC1-209ENST00000581391 LMO7Q8WWI1 1683 aa18.93■□□□□ 0.62
CUEDC1-209ENST00000581391 FYB1O15117 783 aa18.93■□□□□ 0.62
CUEDC1-209ENST00000581391 ONECUT3O60422 494 aaPredicted RBP18.93■□□□□ 0.62
CUEDC1-209ENST00000581391 KCNH5Q8NCM2 988 aa18.93■□□□□ 0.62
CUEDC1-209ENST00000581391 COL18A1P39060 1754 aa18.93■□□□□ 0.62
CUEDC1-209ENST00000581391 BRWD3Q6RI45 1802 aa18.93■□□□□ 0.62
CUEDC1-209ENST00000581391 RGPD5Q99666 1765 aa18.92■□□□□ 0.62
CUEDC1-209ENST00000581391 NFAT5O94916 1531 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms