RNA–Protein interactions for RNA: ENST00000581386.5

TMEM199-208, Transcript of transmembrane protein 199, humanhuman

TSL 4

Gene TMEM199, Length 481 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-208ENST00000581386 ATAD2Q6PL18 1390 aa28.34■■■□□ 2.13
TMEM199-208ENST00000581386 USP47Q96K76 1375 aa28.34■■■□□ 2.13
TMEM199-208ENST00000581386 QTRT2Q9H974 415 aaKnown RBP28.33■■■□□ 2.13
TMEM199-208ENST00000581386 HAP1P54257 671 aaPredicted RBP28.32■■■□□ 2.12
TMEM199-208ENST00000581386 USP21Q9UK80 565 aa28.32■■■□□ 2.12
TMEM199-208ENST00000581386 PUS7Q96PZ0 661 aaKnown RBP28.31■■■□□ 2.12
TMEM199-208ENST00000581386 USP6P35125 1406 aa28.3■■■□□ 2.12
TMEM199-208ENST00000581386 NUTM2GQ5VZR2 741 aa28.3■■■□□ 2.12
TMEM199-208ENST00000581386 BCL9LQ86UU0 1499 aa28.29■■■□□ 2.12
TMEM199-208ENST00000581386 SSH2Q76I76 1423 aa28.29■■■□□ 2.12
TMEM199-208ENST00000581386 BRD4O60885 1362 aaPredicted RBP28.29■■■□□ 2.12
TMEM199-208ENST00000581386 RXRBP28702 533 aa28.29■■■□□ 2.12
TMEM199-208ENST00000581386 MARF1Q9Y4F3 1742 aaKnown RBP28.29■■■□□ 2.12
TMEM199-208ENST00000581386 FAM83GA6ND36 823 aa28.28■■■□□ 2.12
TMEM199-208ENST00000581386 ABTB2Q8N961 1025 aa28.28■■■□□ 2.12
TMEM199-208ENST00000581386 ZNF692Q9BU19 519 aaPredicted RBP28.28■■■□□ 2.12
TMEM199-208ENST00000581386 CPSF1Q10570 1443 aaKnown RBP28.27■■■□□ 2.12
TMEM199-208ENST00000581386 ABCA3Q99758 1704 aa28.27■■■□□ 2.12
TMEM199-208ENST00000581386 SLC24A1O60721 1099 aa28.26■■■□□ 2.11
TMEM199-208ENST00000581386 SLIT2O94813 1529 aa28.26■■■□□ 2.11
TMEM199-208ENST00000581386 SLC12A5Q9H2X9 1139 aa28.25■■■□□ 2.11
TMEM199-208ENST00000581386 TRPC5Q9UL62 973 aaPredicted RBP28.24■■■□□ 2.11
TMEM199-208ENST00000581386 RBM6P78332 1123 aaKnown RBP28.23■■■□□ 2.11
TMEM199-208ENST00000581386 ATRNO75882 1429 aa28.23■■■□□ 2.11
TMEM199-208ENST00000581386 CRYBG1Q9Y4K1 1723 aa28.23■■■□□ 2.11
TMEM199-208ENST00000581386 UNC5CLQ8IV45 518 aa28.22■■■□□ 2.11
TMEM199-208ENST00000581386 TMC1Q8TDI8 760 aa28.22■■■□□ 2.11
TMEM199-208ENST00000581386 CD163L1Q9NR16 1453 aa28.21■■■□□ 2.11
TMEM199-208ENST00000581386 USP19O94966 1318 aa28.21■■■□□ 2.11
TMEM199-208ENST00000581386 TTC21BQ7Z4L5 1316 aa28.21■■■□□ 2.11
TMEM199-208ENST00000581386 NLRP13Q86W25 1043 aa28.2■■■□□ 2.1
TMEM199-208ENST00000581386 TMF1P82094 1093 aa28.19■■■□□ 2.1
TMEM199-208ENST00000581386 KTN1Q86UP2 1357 aaKnown RBP28.19■■■□□ 2.1
TMEM199-208ENST00000581386 AKAP12Q02952 1782 aa28.17■■■□□ 2.1
TMEM199-208ENST00000581386 NLRP6P59044 892 aa28.17■■■□□ 2.1
TMEM199-208ENST00000581386 CDK12Q9NYV4 1490 aaPredicted RBP28.16■■■□□ 2.1
TMEM199-208ENST00000581386 ZC3H6P61129 1189 aaKnown RBP28.16■■■□□ 2.1
TMEM199-208ENST00000581386 KIAA0232Q92628 1395 aa28.15■■■□□ 2.1
TMEM199-208ENST00000581386 GCP02774 474 aa28.15■■■□□ 2.1
TMEM199-208ENST00000581386 PHRF1Q9P1Y6 1649 aaKnown RBP28.14■■■□□ 2.1
TMEM199-208ENST00000581386 GJD4Q96KN9 370 aaPredicted RBP28.14■■■□□ 2.1
TMEM199-208ENST00000581386 PRDM11Q9NQV5 511 aa28.14■■■□□ 2.1
TMEM199-208ENST00000581386 BTG4Q9NY30 223 aa28.14■■■□□ 2.1
TMEM199-208ENST00000581386 TTC21AQ8NDW8 1320 aa28.14■■■□□ 2.09
TMEM199-208ENST00000581386 HDGFL2Q7Z4V5 671 aaPredicted RBP28.13■■■□□ 2.09
TMEM199-208ENST00000581386 TERF2IPQ9NYB0 399 aa28.13■■■□□ 2.09
TMEM199-208ENST00000581386 CHRNA2Q15822 529 aa28.12■■■□□ 2.09
TMEM199-208ENST00000581386 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.12■■■□□ 2.09
TMEM199-208ENST00000581386 A0A1W2PP64 1363 aa28.11■■■□□ 2.09
TMEM199-208ENST00000581386 NINLQ9Y2I6 1382 aa28.11■■■□□ 2.09
TMEM199-208ENST00000581386 RGS12O14924 1447 aa28.11■■■□□ 2.09
TMEM199-208ENST00000581386 PIK3C2AO00443 1686 aa28.11■■■□□ 2.09
TMEM199-208ENST00000581386 PLCH1Q4KWH8 1693 aa28.11■■■□□ 2.09
TMEM199-208ENST00000581386 VPS72Q15906 364 aa28.11■■■□□ 2.09
TMEM199-208ENST00000581386 NRKQ7Z2Y5 1582 aa28.11■■■□□ 2.09
TMEM199-208ENST00000581386 COL14A1Q05707 1796 aaKnown RBP28.1■■■□□ 2.09
TMEM199-208ENST00000581386 HSPA5P11021 654 aaKnown RBP28.1■■■□□ 2.09
TMEM199-208ENST00000581386 EIF4G2P78344 907 aaKnown RBP eCLIP28.1■■■□□ 2.09
TMEM199-208ENST00000581386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.1■■■□□ 2.09
TMEM199-208ENST00000581386 CPDO75976 1380 aa28.1■■■□□ 2.09
TMEM199-208ENST00000581386 MON2Q7Z3U7 1717 aa28.09■■■□□ 2.09
TMEM199-208ENST00000581386 NWD2Q9ULI1 1742 aa28.09■■■□□ 2.09
TMEM199-208ENST00000581386 ZRANB1Q9UGI0 708 aa28.09■■■□□ 2.09
TMEM199-208ENST00000581386 CDCA8Q53HL2 280 aa28.08■■■□□ 2.09
TMEM199-208ENST00000581386 SLIT3O75094 1523 aa28.07■■■□□ 2.08
TMEM199-208ENST00000581386 NME9Q86XW9 330 aa28.06■■■□□ 2.08
TMEM199-208ENST00000581386 EDC4Q6P2E9 1401 aaKnown RBP28.06■■■□□ 2.08
TMEM199-208ENST00000581386 USP31Q70CQ4 1352 aa28.05■■■□□ 2.08
TMEM199-208ENST00000581386 GLI3P10071 1580 aa28.04■■■□□ 2.08
TMEM199-208ENST00000581386 NRAPQ86VF7 1730 aa28.04■■■□□ 2.08
TMEM199-208ENST00000581386 ANKRD36BQ8N2N9 1353 aa28.02■■■□□ 2.08
TMEM199-208ENST00000581386 CCDC9Q9Y3X0 531 aaKnown RBP28.01■■■□□ 2.07
TMEM199-208ENST00000581386 ONECUT3O60422 494 aaPredicted RBP28■■■□□ 2.07
TMEM199-208ENST00000581386 KCNH5Q8NCM2 988 aa28■■■□□ 2.07
TMEM199-208ENST00000581386 CAMTA1Q9Y6Y1 1673 aa28■■■□□ 2.07
TMEM199-208ENST00000581386 ARHGEF25Q86VW2 580 aa27.99■■■□□ 2.07
TMEM199-208ENST00000581386 SPATA31A5Q5VU36 1347 aa27.98■■■□□ 2.07
TMEM199-208ENST00000581386 SPATA31A7Q8IWB4 1347 aa27.98■■■□□ 2.07
TMEM199-208ENST00000581386 SOX12O15370 315 aa27.97■■■□□ 2.07
TMEM199-208ENST00000581386 STRN4Q9NRL3 753 aa27.97■■■□□ 2.07
TMEM199-208ENST00000581386 AATKQ6ZMQ8 1374 aa27.97■■■□□ 2.07
TMEM199-208ENST00000581386 LMO7Q8WWI1 1683 aa27.97■■■□□ 2.07
TMEM199-208ENST00000581386 ZBTB7CA1YPR0 619 aa27.96■■■□□ 2.07
TMEM199-208ENST00000581386 NFAT5O94916 1531 aa27.94■■■□□ 2.06
TMEM199-208ENST00000581386 C11orf95C9JLR9 678 aaPredicted RBP27.94■■■□□ 2.06
TMEM199-208ENST00000581386 EVA1CP58658 441 aa27.94■■■□□ 2.06
TMEM199-208ENST00000581386 SEPT12Q8IYM1 358 aa27.94■■■□□ 2.06
TMEM199-208ENST00000581386 CARD14Q9BXL6 1004 aa27.94■■■□□ 2.06
TMEM199-208ENST00000581386 AXIN2Q9Y2T1 843 aa27.94■■■□□ 2.06
TMEM199-208ENST00000581386 UPF1Q92900 1129 aaKnown RBP eCLIP27.93■■■□□ 2.06
TMEM199-208ENST00000581386 USP54Q70EL1 1684 aa27.93■■■□□ 2.06
TMEM199-208ENST00000581386 SPATA31A1Q5TZJ5 1347 aa27.92■■■□□ 2.06
TMEM199-208ENST00000581386 OVOS2A0A0J9YW53 1432 aa27.92■■■□□ 2.06
TMEM199-208ENST00000581386 OVOS2Q6IE36 1432 aa27.92■■■□□ 2.06
TMEM199-208ENST00000581386 LARP1Q6PKG0 1096 aaKnown RBP27.92■■■□□ 2.06
TMEM199-208ENST00000581386 FAM98CQ17RN3 349 aaKnown RBP27.91■■■□□ 2.06
TMEM199-208ENST00000581386 MYOM1P52179 1685 aa27.91■■■□□ 2.06
TMEM199-208ENST00000581386 FYB1O15117 783 aa27.9■■■□□ 2.06
TMEM199-208ENST00000581386 COL18A1P39060 1754 aa27.9■■■□□ 2.06
TMEM199-208ENST00000581386 POLR3GLQ9BT43 218 aa27.89■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms