RNA–Protein interactions for RNA: ENST00000581113.6

NF1-220, Transcript of neurofibromin 1, humanhuman

TSL 5

Gene NF1, Length 1,464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-220ENST00000581113 POM121Q96HA1 1249 aa9.1□□□□□ -0.95
NF1-220ENST00000581113 RPIAP49247 311 aa9.09□□□□□ -0.95
NF1-220ENST00000581113 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
NF1-220ENST00000581113 C14orf37Q86TY3 774 aa9.09□□□□□ -0.95
NF1-220ENST00000581113 BAP1Q92560 729 aa9.09□□□□□ -0.95
NF1-220ENST00000581113 EMID1Q96A84 441 aaPredicted RBP9.09□□□□□ -0.95
NF1-220ENST00000581113 COG6Q9Y2V7 657 aa9.09□□□□□ -0.95
NF1-220ENST00000581113 CD2BP2O95400 341 aaKnown RBP9.08□□□□□ -0.96
NF1-220ENST00000581113 ABL2P42684 1182 aa9.08□□□□□ -0.96
NF1-220ENST00000581113 NBPF14Q5TI25 921 aa9.08□□□□□ -0.96
NF1-220ENST00000581113 CLUAP1Q96AJ1 413 aa9.08□□□□□ -0.96
NF1-220ENST00000581113 PRKD2Q9BZL6 878 aa9.08□□□□□ -0.96
NF1-220ENST00000581113 ZNF511Q8NB15 262 aa9.07□□□□□ -0.96
NF1-220ENST00000581113 AGERQ15109 404 aa9.06□□□□□ -0.96
NF1-220ENST00000581113 ZC3H4Q9UPT8 1303 aaKnown RBP9.06□□□□□ -0.96
NF1-220ENST00000581113 GPR37L1O60883 481 aa9.05□□□□□ -0.96
NF1-220ENST00000581113 SH3BP2P78314 561 aa9.05□□□□□ -0.96
NF1-220ENST00000581113 GPKOWQ92917 476 aaPredicted RBP eCLIP9.05□□□□□ -0.96
NF1-220ENST00000581113 SPRYD7Q5W111 196 aa9.04□□□□□ -0.96
NF1-220ENST00000581113 V9GY48 417 aaPredicted RBP9.04□□□□□ -0.96
NF1-220ENST00000581113 SKOR1P84550 965 aa9.03□□□□□ -0.96
NF1-220ENST00000581113 PDXDC2PQ6P474 469 aa9.03□□□□□ -0.96
NF1-220ENST00000581113 MAGEB6P1A0A0J9YX57 407 aa9.02□□□□□ -0.96
NF1-220ENST00000581113 WNT7BP56706 349 aa9.02□□□□□ -0.96
NF1-220ENST00000581113 PTK2Q05397 1052 aa9.02□□□□□ -0.96
NF1-220ENST00000581113 ZNF697Q5TEC3 545 aa9.02□□□□□ -0.96
NF1-220ENST00000581113 BPHLQ86WA6 291 aaPredicted RBP9.02□□□□□ -0.96
NF1-220ENST00000581113 WWC1Q8IX03 1113 aa9.02□□□□□ -0.96
NF1-220ENST00000581113 FOXJ1Q92949 421 aa9.02□□□□□ -0.96
NF1-220ENST00000581113 TIMELESSQ9UNS1 1208 aa9.02□□□□□ -0.96
NF1-220ENST00000581113 IRF5Q13568 498 aa9.02□□□□□ -0.97
NF1-220ENST00000581113 ERICH6Q7L0X2 663 aa9.02□□□□□ -0.97
NF1-220ENST00000581113 ZNF598Q86UK7 904 aaKnown RBP9.02□□□□□ -0.97
NF1-220ENST00000581113 PROSER2Q86WR7 435 aaPredicted RBP9.02□□□□□ -0.97
NF1-220ENST00000581113 ARHGAP9Q9BRR9 750 aa9.02□□□□□ -0.97
NF1-220ENST00000581113 CARD14Q9BXL6 1004 aa9.02□□□□□ -0.97
NF1-220ENST00000581113 SH3BP5LQ7L8J4 393 aa9.01□□□□□ -0.97
NF1-220ENST00000581113 ZMYND15Q9H091 742 aa9.01□□□□□ -0.97
NF1-220ENST00000581113 A6NJR5 290 aa9□□□□□ -0.97
NF1-220ENST00000581113 ZBBXA8MT70 800 aa9□□□□□ -0.97
NF1-220ENST00000581113 FBXO45P0C2W1 286 aa9□□□□□ -0.97
NF1-220ENST00000581113 RC3H1Q5TC82 1133 aaKnown RBP9□□□□□ -0.97
NF1-220ENST00000581113 ZBTB33Q86T24 672 aa9□□□□□ -0.97
NF1-220ENST00000581113 EHBP1Q8NDI1 1231 aa9□□□□□ -0.97
NF1-220ENST00000581113 GPSM3Q9Y4H4 160 aa9□□□□□ -0.97
NF1-220ENST00000581113 RGS20O76081 388 aa8.99□□□□□ -0.97
NF1-220ENST00000581113 VAC14Q08AM6 782 aa8.99□□□□□ -0.97
NF1-220ENST00000581113 FOXC1Q12948 553 aa8.99□□□□□ -0.97
NF1-220ENST00000581113 C4orf48Q5BLP8 95 aa8.99□□□□□ -0.97
NF1-220ENST00000581113 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
NF1-220ENST00000581113 OCSTAMPQ9BR26 566 aa8.98□□□□□ -0.97
NF1-220ENST00000581113 NR1H3Q13133 447 aa8.97□□□□□ -0.97
NF1-220ENST00000581113 WASHC4Q2M389 1173 aa8.97□□□□□ -0.97
NF1-220ENST00000581113 ADAM32Q8TC27 787 aa8.97□□□□□ -0.97
NF1-220ENST00000581113 ZNF330Q9Y3S2 320 aaPredicted RBP8.97□□□□□ -0.97
NF1-220ENST00000581113 WNT7AO00755 349 aa8.96□□□□□ -0.97
NF1-220ENST00000581113 VARSP26640 1264 aaKnown RBP8.96□□□□□ -0.97
NF1-220ENST00000581113 MRGPRX2Q96LB1 330 aa8.96□□□□□ -0.97
NF1-220ENST00000581113 FNBP4Q8N3X1 1017 aaPredicted RBP8.96□□□□□ -0.98
NF1-220ENST00000581113 TNFRSF10AO00220 468 aa8.95□□□□□ -0.98
NF1-220ENST00000581113 ERFEQ4G0M1 354 aa8.95□□□□□ -0.98
NF1-220ENST00000581113 FAM174AQ8TBP5 190 aa8.95□□□□□ -0.98
NF1-220ENST00000581113 PKD2L1Q9P0L9 805 aa8.95□□□□□ -0.98
NF1-220ENST00000581113 TRAK2O60296 914 aa8.94□□□□□ -0.98
NF1-220ENST00000581113 PCDHB9Q9Y5E1 797 aa8.94□□□□□ -0.98
NF1-220ENST00000581113 EIF4G2P78344 907 aaKnown RBP eCLIP8.93□□□□□ -0.98
NF1-220ENST00000581113 SLC10A4Q96EP9 437 aa8.93□□□□□ -0.98
NF1-220ENST00000581113 TLL2Q9Y6L7 1015 aa8.93□□□□□ -0.98
NF1-220ENST00000581113 POM121CA8CG34 1229 aa8.92□□□□□ -0.98
NF1-220ENST00000581113 GDF9O60383 454 aa8.92□□□□□ -0.98
NF1-220ENST00000581113 ARID5BQ14865 1188 aa8.92□□□□□ -0.98
NF1-220ENST00000581113 DZIP3Q86Y13 1208 aaKnown RBP8.92□□□□□ -0.98
NF1-220ENST00000581113 C1QTNF2Q9BXJ5 285 aa8.92□□□□□ -0.98
NF1-220ENST00000581113 SIAH2O43255 324 aa8.9□□□□□ -0.98
NF1-220ENST00000581113 TRIM67Q6ZTA4 783 aa8.9□□□□□ -0.98
NF1-220ENST00000581113 TRMT44Q8IYL2 757 aaKnown RBP8.9□□□□□ -0.98
NF1-220ENST00000581113 ZNF777Q9ULD5 760 aaPredicted RBP8.9□□□□□ -0.98
NF1-220ENST00000581113 TTC24A2A3L6 582 aaPredicted RBP8.89□□□□□ -0.99
NF1-220ENST00000581113 ALDH1A1P00352 501 aa8.89□□□□□ -0.99
NF1-220ENST00000581113 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
NF1-220ENST00000581113 VASH1Q7L8A9 365 aaPredicted RBP8.89□□□□□ -0.99
NF1-220ENST00000581113 CYP4X1Q8N118 509 aa8.89□□□□□ -0.99
NF1-220ENST00000581113 PDZRN3Q9UPQ7 1066 aa8.89□□□□□ -0.99
NF1-220ENST00000581113 ZNF592Q92610 1267 aa8.89□□□□□ -0.99
NF1-220ENST00000581113 SOX11P35716 441 aa8.88□□□□□ -0.99
NF1-220ENST00000581113 PRR20EP86478 221 aa8.88□□□□□ -0.99
NF1-220ENST00000581113 PRR20CP86479 221 aa8.88□□□□□ -0.99
NF1-220ENST00000581113 PRR20DP86480 221 aa8.88□□□□□ -0.99
NF1-220ENST00000581113 PRR20BP86481 221 aa8.88□□□□□ -0.99
NF1-220ENST00000581113 PRR20AP86496 221 aa8.88□□□□□ -0.99
NF1-220ENST00000581113 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
NF1-220ENST00000581113 SNIP1Q8TAD8 396 aaKnown RBP8.88□□□□□ -0.99
NF1-220ENST00000581113 MCCD1P59942 119 aaPredicted RBP8.87□□□□□ -0.99
NF1-220ENST00000581113 GLMNQ92990 594 aa8.87□□□□□ -0.99
NF1-220ENST00000581113 CDV3Q9UKY7 258 aaKnown RBP8.87□□□□□ -0.99
NF1-220ENST00000581113 ARID3CA6NKF2 412 aa8.86□□□□□ -0.99
NF1-220ENST00000581113 HDGFL1Q5TGJ6 251 aa8.86□□□□□ -0.99
NF1-220ENST00000581113 CDK15Q96Q40 435 aa8.86□□□□□ -0.99
NF1-220ENST00000581113 KCTD15Q96SI1 283 aaPredicted RBP8.86□□□□□ -0.99
NF1-220ENST00000581113 MAP4K5Q9Y4K4 846 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms