RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 ACEP12821 1306 aa30.59■■■□□ 2.49
CSNK1D-216ENST00000581108 QRICH2Q9H0J4 1663 aa30.58■■■□□ 2.49
CSNK1D-216ENST00000581108 ATAD2Q6PL18 1390 aa30.58■■■□□ 2.49
CSNK1D-216ENST00000581108 NBPF8Q3BBV2 869 aa30.58■■■□□ 2.49
CSNK1D-216ENST00000581108 PLEKHG3A1L390 1219 aa30.57■■■□□ 2.48
CSNK1D-216ENST00000581108 SRPK2P78362 688 aaKnown RBP30.57■■■□□ 2.48
CSNK1D-216ENST00000581108 CRYBG1Q9Y4K1 1723 aa30.56■■■□□ 2.48
CSNK1D-216ENST00000581108 POLR3AO14802 1390 aaPredicted RBP30.56■■■□□ 2.48
CSNK1D-216ENST00000581108 VPS72Q15906 364 aa30.56■■■□□ 2.48
CSNK1D-216ENST00000581108 CABP2Q9NPB3 220 aa30.55■■■□□ 2.48
CSNK1D-216ENST00000581108 CCDC9Q9Y3X0 531 aaKnown RBP30.53■■■□□ 2.48
CSNK1D-216ENST00000581108 BTG4Q9NY30 223 aa30.52■■■□□ 2.48
CSNK1D-216ENST00000581108 NUTM2GQ5VZR2 741 aa30.51■■■□□ 2.47
CSNK1D-216ENST00000581108 ROCK2O75116 1388 aaKnown RBP30.51■■■□□ 2.47
CSNK1D-216ENST00000581108 COL14A1Q05707 1796 aaKnown RBP30.51■■■□□ 2.47
CSNK1D-216ENST00000581108 EP400Q96L91 3159 aa30.5■■■□□ 2.47
CSNK1D-216ENST00000581108 BRWD3Q6RI45 1802 aa30.5■■■□□ 2.47
CSNK1D-216ENST00000581108 PPIP5K1Q6PFW1 1433 aa30.49■■■□□ 2.47
CSNK1D-216ENST00000581108 TRIM26Q12899 539 aaPredicted RBP30.49■■■□□ 2.47
CSNK1D-216ENST00000581108 NRAPQ86VF7 1730 aa30.48■■■□□ 2.47
CSNK1D-216ENST00000581108 SEPT12Q8IYM1 358 aa30.46■■■□□ 2.47
CSNK1D-216ENST00000581108 PHRF1Q9P1Y6 1649 aaKnown RBP30.45■■■□□ 2.47
CSNK1D-216ENST00000581108 ONECUT3O60422 494 aaPredicted RBP30.45■■■□□ 2.47
CSNK1D-216ENST00000581108 PRDM11Q9NQV5 511 aa30.45■■■□□ 2.47
CSNK1D-216ENST00000581108 CABP1Q9NZU7 370 aa30.45■■■□□ 2.47
CSNK1D-216ENST00000581108 ABTB2Q8N961 1025 aa30.44■■■□□ 2.46
CSNK1D-216ENST00000581108 EVC2Q86UK5 1308 aa30.43■■■□□ 2.46
CSNK1D-216ENST00000581108 KIAA0232Q92628 1395 aa30.42■■■□□ 2.46
CSNK1D-216ENST00000581108 ZC3H6P61129 1189 aaKnown RBP30.42■■■□□ 2.46
CSNK1D-216ENST00000581108 CHRNA2Q15822 529 aa30.4■■■□□ 2.46
CSNK1D-216ENST00000581108 FAM98CQ17RN3 349 aaKnown RBP30.38■■■□□ 2.45
CSNK1D-216ENST00000581108 TONSLQ96HA7 1378 aa30.38■■■□□ 2.45
CSNK1D-216ENST00000581108 CCDC125Q86Z20 511 aa30.37■■■□□ 2.45
CSNK1D-216ENST00000581108 A0A0G2JS52 829 aa30.35■■■□□ 2.45
CSNK1D-216ENST00000581108 MYT1Q01538 1121 aa30.35■■■□□ 2.45
CSNK1D-216ENST00000581108 NLRP13Q86W25 1043 aa30.35■■■□□ 2.45
CSNK1D-216ENST00000581108 SPATA31A5Q5VU36 1347 aa30.35■■■□□ 2.45
CSNK1D-216ENST00000581108 SPATA31A7Q8IWB4 1347 aa30.35■■■□□ 2.45
CSNK1D-216ENST00000581108 USP6P35125 1406 aa30.34■■■□□ 2.45
CSNK1D-216ENST00000581108 KRT27Q7Z3Y8 459 aa30.34■■■□□ 2.45
CSNK1D-216ENST00000581108 CARD11Q9BXL7 1154 aa30.34■■■□□ 2.45
CSNK1D-216ENST00000581108 BRD4O60885 1362 aaPredicted RBP30.33■■■□□ 2.45
CSNK1D-216ENST00000581108 USP19O94966 1318 aa30.33■■■□□ 2.45
CSNK1D-216ENST00000581108 NRKQ7Z2Y5 1582 aa30.32■■■□□ 2.45
CSNK1D-216ENST00000581108 STRN4Q9NRL3 753 aa30.31■■■□□ 2.44
CSNK1D-216ENST00000581108 GCP02774 474 aa30.3■■■□□ 2.44
CSNK1D-216ENST00000581108 NLRP6P59044 892 aa30.28■■■□□ 2.44
CSNK1D-216ENST00000581108 BLMP54132 1417 aaPredicted RBP30.28■■■□□ 2.44
CSNK1D-216ENST00000581108 SSH2Q76I76 1423 aa30.27■■■□□ 2.44
CSNK1D-216ENST00000581108 CPDO75976 1380 aa30.27■■■□□ 2.44
CSNK1D-216ENST00000581108 SPATA31A1Q5TZJ5 1347 aa30.26■■■□□ 2.44
CSNK1D-216ENST00000581108 EVA1CP58658 441 aa30.26■■■□□ 2.43
CSNK1D-216ENST00000581108 CAMTA1Q9Y6Y1 1673 aa30.26■■■□□ 2.43
CSNK1D-216ENST00000581108 ZNF692Q9BU19 519 aaPredicted RBP30.25■■■□□ 2.43
CSNK1D-216ENST00000581108 AKAP12Q02952 1782 aa30.25■■■□□ 2.43
CSNK1D-216ENST00000581108 SBNO2Q9Y2G9 1366 aa30.24■■■□□ 2.43
CSNK1D-216ENST00000581108 PIK3C2AO00443 1686 aa30.23■■■□□ 2.43
CSNK1D-216ENST00000581108 LMO7Q8WWI1 1683 aa30.23■■■□□ 2.43
CSNK1D-216ENST00000581108 THSD7AQ9UPZ6 1657 aa30.22■■■□□ 2.43
CSNK1D-216ENST00000581108 FAM182BQ5T319 152 aa30.21■■■□□ 2.43
CSNK1D-216ENST00000581108 USP35Q9P2H5 1018 aa30.21■■■□□ 2.43
CSNK1D-216ENST00000581108 TTC21BQ7Z4L5 1316 aa30.21■■■□□ 2.43
CSNK1D-216ENST00000581108 LARP1Q6PKG0 1096 aaKnown RBP30.2■■■□□ 2.43
CSNK1D-216ENST00000581108 DEFB132Q7Z7B7 95 aa30.2■■■□□ 2.43
CSNK1D-216ENST00000581108 SLIT3O75094 1523 aa30.19■■■□□ 2.42
CSNK1D-216ENST00000581108 ZBTB7CA1YPR0 619 aa30.19■■■□□ 2.42
CSNK1D-216ENST00000581108 SF3B2Q13435 895 aaKnown RBP30.19■■■□□ 2.42
CSNK1D-216ENST00000581108 CPSF1Q10570 1443 aaKnown RBP30.19■■■□□ 2.42
CSNK1D-216ENST00000581108 KTN1Q86UP2 1357 aaKnown RBP30.16■■■□□ 2.42
CSNK1D-216ENST00000581108 ZRANB1Q9UGI0 708 aa30.16■■■□□ 2.42
CSNK1D-216ENST00000581108 TTC21AQ8NDW8 1320 aa30.14■■■□□ 2.42
CSNK1D-216ENST00000581108 BARGINQ6ZT62 677 aa30.13■■■□□ 2.41
CSNK1D-216ENST00000581108 COL5A2P05997 1499 aaPredicted RBP30.12■■■□□ 2.41
CSNK1D-216ENST00000581108 TMC1Q8TDI8 760 aa30.12■■■□□ 2.41
CSNK1D-216ENST00000581108 MON2Q7Z3U7 1717 aa30.12■■■□□ 2.41
CSNK1D-216ENST00000581108 AATKQ6ZMQ8 1374 aa30.12■■■□□ 2.41
CSNK1D-216ENST00000581108 TCP11L2Q8N4U5 519 aa30.11■■■□□ 2.41
CSNK1D-216ENST00000581108 COL18A1P39060 1754 aa30.1■■■□□ 2.41
CSNK1D-216ENST00000581108 SOX12O15370 315 aa30.1■■■□□ 2.41
CSNK1D-216ENST00000581108 SLC12A5Q9H2X9 1139 aa30.1■■■□□ 2.41
CSNK1D-216ENST00000581108 ST20-MTHFSA0A0A6YYL1 179 aa30.09■■■□□ 2.41
CSNK1D-216ENST00000581108 CD163L1Q9NR16 1453 aa30.09■■■□□ 2.41
CSNK1D-216ENST00000581108 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.08■■■□□ 2.41
CSNK1D-216ENST00000581108 KCNH5Q8NCM2 988 aa30.08■■■□□ 2.41
CSNK1D-216ENST00000581108 TESK2Q96S53 571 aa30.07■■■□□ 2.4
CSNK1D-216ENST00000581108 AXIN2Q9Y2T1 843 aa30.07■■■□□ 2.4
CSNK1D-216ENST00000581108 RGPD1P0DJD0 1748 aa30.06■■■□□ 2.4
CSNK1D-216ENST00000581108 ARHGEF25Q86VW2 580 aa30.06■■■□□ 2.4
CSNK1D-216ENST00000581108 THRAP3Q9Y2W1 955 aaKnown RBP30.06■■■□□ 2.4
CSNK1D-216ENST00000581108 CRB1P82279 1406 aa30.05■■■□□ 2.4
CSNK1D-216ENST00000581108 RGPD5Q99666 1765 aa30.05■■■□□ 2.4
CSNK1D-216ENST00000581108 BAG6P46379 1132 aa30.05■■■□□ 2.4
CSNK1D-216ENST00000581108 PDE3BQ13370 1112 aa30.04■■■□□ 2.4
CSNK1D-216ENST00000581108 HDGFL2Q7Z4V5 671 aaPredicted RBP30.04■■■□□ 2.4
CSNK1D-216ENST00000581108 PUS7Q96PZ0 661 aaKnown RBP30.04■■■□□ 2.4
CSNK1D-216ENST00000581108 FAM196AQ6ZSG2 479 aa30.03■■■□□ 2.4
CSNK1D-216ENST00000581108 SRCAPQ6ZRS2 3230 aa30.03■■■□□ 2.4
CSNK1D-216ENST00000581108 NME9Q86XW9 330 aa30.02■■■□□ 2.4
CSNK1D-216ENST00000581108 TOM1L2Q6ZVM7 507 aa30.01■■■□□ 2.39
CSNK1D-216ENST00000581108 PCGF6Q9BYE7 350 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms