RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 NUTM2GQ5VZR2 741 aa18.2■□□□□ 0.5
CDC42EP4-207ENST00000581045 USP6P35125 1406 aa18.2■□□□□ 0.5
CDC42EP4-207ENST00000581045 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
CDC42EP4-207ENST00000581045 KTN1Q86UP2 1357 aaKnown RBP18.19■□□□□ 0.5
CDC42EP4-207ENST00000581045 CDCA8Q53HL2 280 aa18.19■□□□□ 0.5
CDC42EP4-207ENST00000581045 NRKQ7Z2Y5 1582 aa18.19■□□□□ 0.5
CDC42EP4-207ENST00000581045 CABLES1Q8TDN4 633 aa18.19■□□□□ 0.5
CDC42EP4-207ENST00000581045 MARF1Q9Y4F3 1742 aaKnown RBP18.18■□□□□ 0.5
CDC42EP4-207ENST00000581045 ADAMTS2O95450 1211 aa18.18■□□□□ 0.5
CDC42EP4-207ENST00000581045 HAP1P54257 671 aaPredicted RBP18.18■□□□□ 0.5
CDC42EP4-207ENST00000581045 PUS7Q96PZ0 661 aaKnown RBP18.18■□□□□ 0.5
CDC42EP4-207ENST00000581045 CD163L1Q9NR16 1453 aa18.18■□□□□ 0.5
CDC42EP4-207ENST00000581045 HDGFL2Q7Z4V5 671 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP4-207ENST00000581045 PHF23Q9BUL5 403 aaPredicted RBP18.17■□□□□ 0.5
CDC42EP4-207ENST00000581045 A0A1W2PP64 1363 aa18.17■□□□□ 0.5
CDC42EP4-207ENST00000581045 CPSF1Q10570 1443 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-207ENST00000581045 PIK3C2AO00443 1686 aa18.16■□□□□ 0.5
CDC42EP4-207ENST00000581045 CRYBG1Q9Y4K1 1723 aa18.16■□□□□ 0.5
CDC42EP4-207ENST00000581045 PHRF1Q9P1Y6 1649 aaKnown RBP18.16■□□□□ 0.5
CDC42EP4-207ENST00000581045 ABTB2Q8N961 1025 aa18.15■□□□□ 0.5
CDC42EP4-207ENST00000581045 ZNF692Q9BU19 519 aaPredicted RBP18.15■□□□□ 0.5
CDC42EP4-207ENST00000581045 TERF2IPQ9NYB0 399 aa18.15■□□□□ 0.5
CDC42EP4-207ENST00000581045 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
CDC42EP4-207ENST00000581045 C11orf95C9JLR9 678 aaPredicted RBP18.14■□□□□ 0.49
CDC42EP4-207ENST00000581045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.14■□□□□ 0.49
CDC42EP4-207ENST00000581045 C8orf37Q96NL8 207 aa18.13■□□□□ 0.49
CDC42EP4-207ENST00000581045 TTC21BQ7Z4L5 1316 aa18.13■□□□□ 0.49
CDC42EP4-207ENST00000581045 ZEB1P37275 1124 aaPredicted RBP18.12■□□□□ 0.49
CDC42EP4-207ENST00000581045 SSH2Q76I76 1423 aa18.12■□□□□ 0.49
CDC42EP4-207ENST00000581045 BRD4O60885 1362 aaPredicted RBP18.11■□□□□ 0.49
CDC42EP4-207ENST00000581045 ANKRD36BQ8N2N9 1353 aa18.11■□□□□ 0.49
CDC42EP4-207ENST00000581045 EDC4Q6P2E9 1401 aaKnown RBP18.1■□□□□ 0.49
CDC42EP4-207ENST00000581045 NLRP6P59044 892 aa18.09■□□□□ 0.49
CDC42EP4-207ENST00000581045 KIF20BQ96Q89 1820 aa18.09■□□□□ 0.49
CDC42EP4-207ENST00000581045 KIF7Q2M1P5 1343 aa18.08■□□□□ 0.49
CDC42EP4-207ENST00000581045 TTC21AQ8NDW8 1320 aa18.08■□□□□ 0.49
CDC42EP4-207ENST00000581045 NLRP13Q86W25 1043 aa18.08■□□□□ 0.48
CDC42EP4-207ENST00000581045 NME9Q86XW9 330 aa18.08■□□□□ 0.48
CDC42EP4-207ENST00000581045 NGLY1Q96IV0 654 aa18.08■□□□□ 0.48
CDC42EP4-207ENST00000581045 ZRANB1Q9UGI0 708 aa18.08■□□□□ 0.48
CDC42EP4-207ENST00000581045 PLCH1Q4KWH8 1693 aa18.08■□□□□ 0.48
CDC42EP4-207ENST00000581045 AFF2P51816 1311 aa18.07■□□□□ 0.48
CDC42EP4-207ENST00000581045 SOX12O15370 315 aa18.07■□□□□ 0.48
CDC42EP4-207ENST00000581045 ZBTB7CA1YPR0 619 aa18.06■□□□□ 0.48
CDC42EP4-207ENST00000581045 ZC3H6P61129 1189 aaKnown RBP18.05■□□□□ 0.48
CDC42EP4-207ENST00000581045 NSD3Q9BZ95 1437 aa18.05■□□□□ 0.48
CDC42EP4-207ENST00000581045 USP19O94966 1318 aa18.04■□□□□ 0.48
CDC42EP4-207ENST00000581045 RGS17Q9UGC6 210 aaPredicted RBP18.04■□□□□ 0.48
CDC42EP4-207ENST00000581045 SLIT3O75094 1523 aa18.03■□□□□ 0.48
CDC42EP4-207ENST00000581045 USP54Q70EL1 1684 aa18.03■□□□□ 0.48
CDC42EP4-207ENST00000581045 COL14A1Q05707 1796 aaKnown RBP18.03■□□□□ 0.48
CDC42EP4-207ENST00000581045 CCDC7Q96M83 1385 aa18.03■□□□□ 0.48
CDC42EP4-207ENST00000581045 WASHC2AQ641Q2 1341 aa18.02■□□□□ 0.48
CDC42EP4-207ENST00000581045 CARD14Q9BXL6 1004 aa18.02■□□□□ 0.48
CDC42EP4-207ENST00000581045 PRDM11Q9NQV5 511 aa18.02■□□□□ 0.48
CDC42EP4-207ENST00000581045 KIAA0232Q92628 1395 aa18.02■□□□□ 0.47
CDC42EP4-207ENST00000581045 GCP02774 474 aa18.01■□□□□ 0.47
CDC42EP4-207ENST00000581045 CHRNA2Q15822 529 aa18.01■□□□□ 0.47
CDC42EP4-207ENST00000581045 PANK3Q9H999 370 aa18.01■□□□□ 0.47
CDC42EP4-207ENST00000581045 USP21Q9UK80 565 aa18.01■□□□□ 0.47
CDC42EP4-207ENST00000581045 NWD2Q9ULI1 1742 aa18.01■□□□□ 0.47
CDC42EP4-207ENST00000581045 LTN1O94822 1766 aa18■□□□□ 0.47
CDC42EP4-207ENST00000581045 FAM83GA6ND36 823 aa18■□□□□ 0.47
CDC42EP4-207ENST00000581045 GGNBP2Q9H3C7 697 aa18■□□□□ 0.47
CDC42EP4-207ENST00000581045 ZNF772Q68DY9 489 aaPredicted RBP17.99■□□□□ 0.47
CDC42EP4-207ENST00000581045 POTEAQ6S8J7 498 aa17.99■□□□□ 0.47
CDC42EP4-207ENST00000581045 OVOS2A0A0J9YW53 1432 aa17.98■□□□□ 0.47
CDC42EP4-207ENST00000581045 OVOS2Q6IE36 1432 aa17.98■□□□□ 0.47
CDC42EP4-207ENST00000581045 NRAPQ86VF7 1730 aa17.98■□□□□ 0.47
CDC42EP4-207ENST00000581045 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.98■□□□□ 0.47
CDC42EP4-207ENST00000581045 COG3Q96JB2 828 aa17.98■□□□□ 0.47
CDC42EP4-207ENST00000581045 USP31Q70CQ4 1352 aa17.98■□□□□ 0.47
CDC42EP4-207ENST00000581045 RGPD5Q99666 1765 aa17.98■□□□□ 0.47
CDC42EP4-207ENST00000581045 NFAT5O94916 1531 aa17.98■□□□□ 0.47
CDC42EP4-207ENST00000581045 FNBP4Q8N3X1 1017 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP4-207ENST00000581045 ANKRD26Q9UPS8 1709 aa17.97■□□□□ 0.47
CDC42EP4-207ENST00000581045 SLIT2O94813 1529 aa17.97■□□□□ 0.47
CDC42EP4-207ENST00000581045 FYB1O15117 783 aa17.96■□□□□ 0.47
CDC42EP4-207ENST00000581045 KCNH5Q8NCM2 988 aa17.96■□□□□ 0.47
CDC42EP4-207ENST00000581045 BTG4Q9NY30 223 aa17.96■□□□□ 0.47
CDC42EP4-207ENST00000581045 BCL9LQ86UU0 1499 aa17.95■□□□□ 0.46
CDC42EP4-207ENST00000581045 QTRT2Q9H974 415 aaKnown RBP17.95■□□□□ 0.46
CDC42EP4-207ENST00000581045 LMO7Q8WWI1 1683 aa17.95■□□□□ 0.46
CDC42EP4-207ENST00000581045 CGNL1Q0VF96 1302 aa17.95■□□□□ 0.46
CDC42EP4-207ENST00000581045 CCDC9Q9Y3X0 531 aaKnown RBP17.94■□□□□ 0.46
CDC42EP4-207ENST00000581045 CPDO75976 1380 aa17.93■□□□□ 0.46
CDC42EP4-207ENST00000581045 FBLN1P23142 703 aa17.93■□□□□ 0.46
CDC42EP4-207ENST00000581045 UNC5CLQ8IV45 518 aa17.93■□□□□ 0.46
CDC42EP4-207ENST00000581045 STRN4Q9NRL3 753 aa17.93■□□□□ 0.46
CDC42EP4-207ENST00000581045 COL18A1P39060 1754 aa17.93■□□□□ 0.46
CDC42EP4-207ENST00000581045 CNGB1Q14028 1251 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP4-207ENST00000581045 TRPC5Q9UL62 973 aaPredicted RBP17.92■□□□□ 0.46
CDC42EP4-207ENST00000581045 KNSTRNQ9Y448 316 aa17.92■□□□□ 0.46
CDC42EP4-207ENST00000581045 CAMTA1Q9Y6Y1 1673 aa17.92■□□□□ 0.46
CDC42EP4-207ENST00000581045 ATRNO75882 1429 aa17.91■□□□□ 0.46
CDC42EP4-207ENST00000581045 ILDR2Q71H61 639 aa17.91■□□□□ 0.46
CDC42EP4-207ENST00000581045 EVA1CP58658 441 aa17.9■□□□□ 0.46
CDC42EP4-207ENST00000581045 ARHGEF25Q86VW2 580 aa17.9■□□□□ 0.46
CDC42EP4-207ENST00000581045 MAP2P11137 1827 aaKnown RBP17.89■□□□□ 0.45
CDC42EP4-207ENST00000581045 RXRBP28702 533 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms