RNA–Protein interactions for RNA: ENST00000580949.1

PTPRM-213, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-213ENST00000580949 CCDC102AQ96A19 550 aa9.1□□□□□ -0.95
PTPRM-213ENST00000580949 MPHOSPH9Q99550 1183 aa9.1□□□□□ -0.95
PTPRM-213ENST00000580949 SYCP2Q9BX26 1530 aa9.1□□□□□ -0.95
PTPRM-213ENST00000580949 DENND4BO75064 1496 aaPredicted RBP9.09□□□□□ -0.95
PTPRM-213ENST00000580949 CCDC141Q6ZP82 1450 aa9.09□□□□□ -0.95
PTPRM-213ENST00000580949 PLEKHH2Q8IVE3 1493 aa9.09□□□□□ -0.95
PTPRM-213ENST00000580949 TRAPPC8Q9Y2L5 1435 aa9.09□□□□□ -0.95
PTPRM-213ENST00000580949 AFAP1Q8N556 730 aa9.09□□□□□ -0.95
PTPRM-213ENST00000580949 ARAP3Q8WWN8 1544 aa9.09□□□□□ -0.95
PTPRM-213ENST00000580949 ABCA9Q8IUA7 1624 aa9.09□□□□□ -0.95
PTPRM-213ENST00000580949 GCC2Q8IWJ2 1684 aa9.08□□□□□ -0.96
PTPRM-213ENST00000580949 GOLGA8CPA6NN73 597 aa9.08□□□□□ -0.96
PTPRM-213ENST00000580949 ZFRQ96KR1 1074 aaKnown RBP9.08□□□□□ -0.96
PTPRM-213ENST00000580949 MYT1LQ9UL68 1186 aa9.08□□□□□ -0.96
PTPRM-213ENST00000580949 MYO5CQ9NQX4 1742 aa9.08□□□□□ -0.96
PTPRM-213ENST00000580949 ANKRD50Q9ULJ7 1429 aa9.07□□□□□ -0.96
PTPRM-213ENST00000580949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.07□□□□□ -0.96
PTPRM-213ENST00000580949 RCCD1A6NED2 376 aa9.07□□□□□ -0.96
PTPRM-213ENST00000580949 DNAJB2P25686 324 aa9.07□□□□□ -0.96
PTPRM-213ENST00000580949 NEUROD1Q13562 356 aa9.07□□□□□ -0.96
PTPRM-213ENST00000580949 AK7Q96M32 723 aa9.07□□□□□ -0.96
PTPRM-213ENST00000580949 KIF15Q9NS87 1388 aa9.07□□□□□ -0.96
PTPRM-213ENST00000580949 FANCAO15360 1455 aa9.07□□□□□ -0.96
PTPRM-213ENST00000580949 CROCC2H7BZ55 1655 aa9.07□□□□□ -0.96
PTPRM-213ENST00000580949 CD109Q6YHK3 1445 aa9.06□□□□□ -0.96
PTPRM-213ENST00000580949 SLC24A3Q9HC58 644 aa9.06□□□□□ -0.96
PTPRM-213ENST00000580949 SCAPERQ9BY12 1400 aa9.05□□□□□ -0.96
PTPRM-213ENST00000580949 ABCC1P33527 1531 aa9.05□□□□□ -0.96
PTPRM-213ENST00000580949 PHOX2BQ99453 314 aa9.05□□□□□ -0.96
PTPRM-213ENST00000580949 PZPP20742 1482 aa9.04□□□□□ -0.96
PTPRM-213ENST00000580949 ANKK1Q8NFD2 765 aa9.04□□□□□ -0.96
PTPRM-213ENST00000580949 WNT2BQ93097 391 aa9.04□□□□□ -0.96
PTPRM-213ENST00000580949 TMEM134Q9H6X4 195 aa9.04□□□□□ -0.96
PTPRM-213ENST00000580949 SPAG9O60271 1321 aaKnown RBP9.04□□□□□ -0.96
PTPRM-213ENST00000580949 ACIN1Q9UKV3 1341 aaKnown RBP9.04□□□□□ -0.96
PTPRM-213ENST00000580949 ADGBQ8N7X0 1667 aa9.04□□□□□ -0.96
PTPRM-213ENST00000580949 MAST1Q9Y2H9 1570 aa9.03□□□□□ -0.96
PTPRM-213ENST00000580949 HDGFP51858 240 aaKnown RBP9.03□□□□□ -0.96
PTPRM-213ENST00000580949 ADGRL1O94910 1474 aa9.02□□□□□ -0.96
PTPRM-213ENST00000580949 NUP155O75694 1391 aa9.02□□□□□ -0.97
PTPRM-213ENST00000580949 ANKRD30BQ9BXX2 1392 aa9.02□□□□□ -0.97
PTPRM-213ENST00000580949 TRIM66O15016 1216 aa9.02□□□□□ -0.97
PTPRM-213ENST00000580949 FAM69CQ0P6D2 419 aa9.02□□□□□ -0.97
PTPRM-213ENST00000580949 MMRN1Q13201 1228 aa9.02□□□□□ -0.97
PTPRM-213ENST00000580949 SAMD7Q7Z3H4 446 aa9.02□□□□□ -0.97
PTPRM-213ENST00000580949 SOWAHBA6NEL2 793 aa9.01□□□□□ -0.97
PTPRM-213ENST00000580949 RTEL1-TNFRSF6BF6WH68 1400 aa9.01□□□□□ -0.97
PTPRM-213ENST00000580949 AMHR2Q16671 573 aa9.01□□□□□ -0.97
PTPRM-213ENST00000580949 SWT1Q5T5J6 900 aaKnown RBP9.01□□□□□ -0.97
PTPRM-213ENST00000580949 RNF166Q96A37 237 aaPredicted RBP9.01□□□□□ -0.97
PTPRM-213ENST00000580949 KCTD12Q96CX2 325 aaKnown RBP9.01□□□□□ -0.97
PTPRM-213ENST00000580949 LRCH3Q96II8 777 aa9.01□□□□□ -0.97
PTPRM-213ENST00000580949 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.01□□□□□ -0.97
PTPRM-213ENST00000580949 TIMELESSQ9UNS1 1208 aa9.01□□□□□ -0.97
PTPRM-213ENST00000580949 PPP1R15AO75807 674 aaPredicted RBP9□□□□□ -0.97
PTPRM-213ENST00000580949 THSD4Q6ZMP0 1018 aa9□□□□□ -0.97
PTPRM-213ENST00000580949 DAXXQ9UER7 740 aaPredicted RBP9□□□□□ -0.97
PTPRM-213ENST00000580949 GLI2P10070 1586 aa8.99□□□□□ -0.97
PTPRM-213ENST00000580949 RAPGEF3O95398 923 aa8.99□□□□□ -0.97
PTPRM-213ENST00000580949 SLF2Q8IX21 1173 aa8.99□□□□□ -0.97
PTPRM-213ENST00000580949 PLXNC1O60486 1568 aa8.99□□□□□ -0.97
PTPRM-213ENST00000580949 CLCN1P35523 988 aa8.98□□□□□ -0.97
PTPRM-213ENST00000580949 SLC4A3P48751 1232 aa8.98□□□□□ -0.97
PTPRM-213ENST00000580949 MDM2Q00987 491 aaPredicted RBP8.98□□□□□ -0.97
PTPRM-213ENST00000580949 NLRP7Q8WX94 980 aa8.98□□□□□ -0.97
PTPRM-213ENST00000580949 ZFYVE16Q7Z3T8 1539 aa8.98□□□□□ -0.97
PTPRM-213ENST00000580949 DUOX2Q9NRD8 1548 aa8.98□□□□□ -0.97
PTPRM-213ENST00000580949 POGZQ7Z3K3 1410 aa8.97□□□□□ -0.97
PTPRM-213ENST00000580949 NEO1Q92859 1461 aa8.97□□□□□ -0.97
PTPRM-213ENST00000580949 KDM5DQ9BY66 1539 aa8.97□□□□□ -0.97
PTPRM-213ENST00000580949 BCAMP50895 628 aa8.97□□□□□ -0.97
PTPRM-213ENST00000580949 TMUB1Q9BVT8 246 aa8.97□□□□□ -0.97
PTPRM-213ENST00000580949 GPCPD1Q9NPB8 672 aa8.97□□□□□ -0.97
PTPRM-213ENST00000580949 ERBINQ96RT1 1412 aa8.97□□□□□ -0.97
PTPRM-213ENST00000580949 MAP3K4Q9Y6R4 1608 aa8.96□□□□□ -0.98
PTPRM-213ENST00000580949 NECTIN2Q92692 538 aa8.96□□□□□ -0.98
PTPRM-213ENST00000580949 TSR3Q9UJK0 312 aaKnown RBP8.96□□□□□ -0.98
PTPRM-213ENST00000580949 DHX29Q7Z478 1369 aaKnown RBP8.96□□□□□ -0.98
PTPRM-213ENST00000580949 ZNF518AQ6AHZ1 1483 aa8.96□□□□□ -0.98
PTPRM-213ENST00000580949 ATP7AQ04656 1500 aa8.95□□□□□ -0.98
PTPRM-213ENST00000580949 DIP2BQ9P265 1576 aa8.95□□□□□ -0.98
PTPRM-213ENST00000580949 INO80Q9ULG1 1556 aaPredicted RBP8.95□□□□□ -0.98
PTPRM-213ENST00000580949 PDE4DQ08499 809 aa8.95□□□□□ -0.98
PTPRM-213ENST00000580949 L3MBTL2Q969R5 705 aa8.95□□□□□ -0.98
PTPRM-213ENST00000580949 HPS5Q9UPZ3 1129 aa8.95□□□□□ -0.98
PTPRM-213ENST00000580949 TONSLQ96HA7 1378 aa8.95□□□□□ -0.98
PTPRM-213ENST00000580949 KIF3BO15066 747 aa8.94□□□□□ -0.98
PTPRM-213ENST00000580949 TTLL12Q14166 644 aaPredicted RBP8.94□□□□□ -0.98
PTPRM-213ENST00000580949 SULF1Q8IWU6 871 aa8.94□□□□□ -0.98
PTPRM-213ENST00000580949 RPRD2Q5VT52 1461 aaKnown RBP8.94□□□□□ -0.98
PTPRM-213ENST00000580949 MLH3Q9UHC1 1453 aa8.94□□□□□ -0.98
PTPRM-213ENST00000580949 FAM135AQ9P2D6 1515 aa8.94□□□□□ -0.98
PTPRM-213ENST00000580949 RNF40O75150 1001 aa8.93□□□□□ -0.98
PTPRM-213ENST00000580949 PPP4CP60510 307 aa8.93□□□□□ -0.98
PTPRM-213ENST00000580949 PARP9Q8IXQ6 854 aa8.93□□□□□ -0.98
PTPRM-213ENST00000580949 HCSTQ9UBK5 93 aa8.93□□□□□ -0.98
PTPRM-213ENST00000580949 PLA2R1Q13018 1463 aa8.93□□□□□ -0.98
PTPRM-213ENST00000580949 MAGI2Q86UL8 1455 aa8.93□□□□□ -0.98
PTPRM-213ENST00000580949 UNC13BO14795 1591 aa8.93□□□□□ -0.98
PTPRM-213ENST00000580949 KDM5CP41229 1560 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms