RNA–Protein interactions for RNA: ENST00000580813.1

VNN3-214, Transcript of vanin 3, humanhuman

TSL 5

Gene VNN3, Length 558 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-214ENST00000580813 NUTM2DQ5VT03 806 aaPredicted RBP12.02□□□□□ -0.49
VNN3-214ENST00000580813 NUTM2AQ8IVF1 878 aaPredicted RBP12.02□□□□□ -0.49
VNN3-214ENST00000580813 ZNF511Q8NB15 262 aa12.02□□□□□ -0.49
VNN3-214ENST00000580813 LIMD1Q9UGP4 676 aa12.02□□□□□ -0.49
VNN3-214ENST00000580813 QPCTQ16769 361 aa11.99□□□□□ -0.49
VNN3-214ENST00000580813 MAP10Q9P2G4 905 aa11.99□□□□□ -0.49
VNN3-214ENST00000580813 TLL2Q9Y6L7 1015 aa11.98□□□□□ -0.49
VNN3-214ENST00000580813 PER1O15534 1290 aaPredicted RBP11.96□□□□□ -0.49
VNN3-214ENST00000580813 VARSP26640 1264 aaKnown RBP11.96□□□□□ -0.49
VNN3-214ENST00000580813 SENP2Q9HC62 589 aa11.96□□□□□ -0.49
VNN3-214ENST00000580813 LILRB3O75022 631 aa11.95□□□□□ -0.5
VNN3-214ENST00000580813 F12P00748 615 aaPredicted RBP11.95□□□□□ -0.5
VNN3-214ENST00000580813 CLK2P49760 499 aaKnown RBP11.95□□□□□ -0.5
VNN3-214ENST00000580813 RSPH6AQ9H0K4 717 aa11.95□□□□□ -0.5
VNN3-214ENST00000580813 POLR3EQ9NVU0 708 aa11.95□□□□□ -0.5
VNN3-214ENST00000580813 PLEKHG3A1L390 1219 aa11.94□□□□□ -0.5
VNN3-214ENST00000580813 SNRPBP14678 240 aaKnown RBP11.94□□□□□ -0.5
VNN3-214ENST00000580813 TUSC1Q2TAM9 212 aa11.94□□□□□ -0.5
VNN3-214ENST00000580813 BCANQ96GW7 911 aa11.94□□□□□ -0.5
VNN3-214ENST00000580813 CAPN5O15484 640 aaPredicted RBP11.93□□□□□ -0.5
VNN3-214ENST00000580813 TREML4Q6UXN2 200 aa11.93□□□□□ -0.5
VNN3-214ENST00000580813 TRIM47Q96LD4 638 aa11.93□□□□□ -0.5
VNN3-214ENST00000580813 AGERQ15109 404 aa11.92□□□□□ -0.5
VNN3-214ENST00000580813 RTL5Q5HYW3 569 aaPredicted RBP11.92□□□□□ -0.5
VNN3-214ENST00000580813 FOXJ1Q92949 421 aa11.92□□□□□ -0.5
VNN3-214ENST00000580813 HELBQ8NG08 1087 aaPredicted RBP11.91□□□□□ -0.5
VNN3-214ENST00000580813 FAM174AQ8TBP5 190 aa11.91□□□□□ -0.5
VNN3-214ENST00000580813 BMP1P13497 986 aa11.9□□□□□ -0.5
VNN3-214ENST00000580813 KIFC2Q96AC6 838 aa11.9□□□□□ -0.5
VNN3-214ENST00000580813 NNTQ13423 1086 aa11.89□□□□□ -0.51
VNN3-214ENST00000580813 ARID5BQ14865 1188 aa11.89□□□□□ -0.51
VNN3-214ENST00000580813 MPNDQ8N594 471 aa11.88□□□□□ -0.51
VNN3-214ENST00000580813 GPBP1L1Q9HC44 474 aaPredicted RBP11.88□□□□□ -0.51
VNN3-214ENST00000580813 ATP1B4Q9UN42 357 aaPredicted RBP11.88□□□□□ -0.51
VNN3-214ENST00000580813 WFS1O76024 890 aa11.87□□□□□ -0.51
VNN3-214ENST00000580813 TRIM46Q7Z4K8 759 aa11.86□□□□□ -0.51
VNN3-214ENST00000580813 BPHLQ86WA6 291 aaPredicted RBP11.86□□□□□ -0.51
VNN3-214ENST00000580813 KDM4CQ9H3R0 1056 aa11.86□□□□□ -0.51
VNN3-214ENST00000580813 ARMC2Q8NEN0 867 aa11.85□□□□□ -0.51
VNN3-214ENST00000580813 ADH1CP00326 375 aa11.84□□□□□ -0.51
VNN3-214ENST00000580813 C4orf48Q5BLP8 95 aa11.84□□□□□ -0.51
VNN3-214ENST00000580813 LCE2AQ5TA79 106 aaPredicted RBP11.84□□□□□ -0.51
VNN3-214ENST00000580813 SLC24A1O60721 1099 aa11.83□□□□□ -0.52
VNN3-214ENST00000580813 WDR4P57081 412 aaKnown RBP11.83□□□□□ -0.52
VNN3-214ENST00000580813 CTDSPL2Q05D32 466 aa11.82□□□□□ -0.52
VNN3-214ENST00000580813 NFX1Q12986 1120 aaKnown RBP11.82□□□□□ -0.52
VNN3-214ENST00000580813 CDK15Q96Q40 435 aa11.82□□□□□ -0.52
VNN3-214ENST00000580813 FAM117AQ9C073 453 aa11.82□□□□□ -0.52
VNN3-214ENST00000580813 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
VNN3-214ENST00000580813 NBPF14Q5TI25 921 aa11.81□□□□□ -0.52
VNN3-214ENST00000580813 DDRGK1Q96HY6 314 aa11.8□□□□□ -0.52
VNN3-214ENST00000580813 MAGEB6P1A0A0J9YX57 407 aa11.79□□□□□ -0.52
VNN3-214ENST00000580813 TERTO14746 1132 aaKnown RBP11.79□□□□□ -0.52
VNN3-214ENST00000580813 TIMP2P16035 220 aa11.79□□□□□ -0.52
VNN3-214ENST00000580813 SH3D19Q5HYK7 790 aa11.79□□□□□ -0.52
VNN3-214ENST00000580813 PROCA1Q8NCQ7 364 aaPredicted RBP11.79□□□□□ -0.52
VNN3-214ENST00000580813 ZFP42Q96MM3 310 aa11.79□□□□□ -0.52
VNN3-214ENST00000580813 NR5A1Q13285 461 aa11.77□□□□□ -0.53
VNN3-214ENST00000580813 MRPL14Q6P1L8 145 aaKnown RBP11.77□□□□□ -0.53
VNN3-214ENST00000580813 ZIC2O95409 532 aaPredicted RBP11.76□□□□□ -0.53
VNN3-214ENST00000580813 NR3C2P08235 984 aa11.76□□□□□ -0.53
VNN3-214ENST00000580813 GRM5P41594 1212 aa11.76□□□□□ -0.53
VNN3-214ENST00000580813 SCARF1Q14162 830 aa11.76□□□□□ -0.53
VNN3-214ENST00000580813 SH3RF1Q7Z6J0 888 aa11.76□□□□□ -0.53
VNN3-214ENST00000580813 LRRN4Q8WUT4 740 aa11.76□□□□□ -0.53
VNN3-214ENST00000580813 CARD14Q9BXL6 1004 aa11.76□□□□□ -0.53
VNN3-214ENST00000580813 FBXO31Q5XUX0 539 aaPredicted RBP11.75□□□□□ -0.53
VNN3-214ENST00000580813 SH3BP5LQ7L8J4 393 aa11.75□□□□□ -0.53
VNN3-214ENST00000580813 PURBQ96QR8 312 aaKnown RBP11.75□□□□□ -0.53
VNN3-214ENST00000580813 KLF16Q9BXK1 252 aaPredicted RBP11.75□□□□□ -0.53
VNN3-214ENST00000580813 ZFAND3Q9H8U3 227 aa11.75□□□□□ -0.53
VNN3-214ENST00000580813 ITPKCQ96DU7 683 aa11.74□□□□□ -0.53
VNN3-214ENST00000580813 C1QTNF2Q9BXJ5 285 aa11.74□□□□□ -0.53
VNN3-214ENST00000580813 VASH1Q7L8A9 365 aaPredicted RBP11.73□□□□□ -0.53
VNN3-214ENST00000580813 GPKOWQ92917 476 aaPredicted RBP eCLIP11.73□□□□□ -0.53
VNN3-214ENST00000580813 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.73□□□□□ -0.53
VNN3-214ENST00000580813 FSHRP23945 695 aa11.72□□□□□ -0.53
VNN3-214ENST00000580813 NXF1Q9UBU9 619 aaKnown RBP11.72□□□□□ -0.53
VNN3-214ENST00000580813 AP1G2O75843 785 aa11.71□□□□□ -0.53
VNN3-214ENST00000580813 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
VNN3-214ENST00000580813 NR6A1Q15406 480 aa11.7□□□□□ -0.54
VNN3-214ENST00000580813 C6orf118Q5T5N4 469 aa11.7□□□□□ -0.54
VNN3-214ENST00000580813 PPP2R2DQ66LE6 453 aa11.7□□□□□ -0.54
VNN3-214ENST00000580813 TRMT44Q8IYL2 757 aaKnown RBP11.7□□□□□ -0.54
VNN3-214ENST00000580813 FKBPLQ9UIM3 349 aa11.7□□□□□ -0.54
VNN3-214ENST00000580813 VEGFBP49765 207 aa11.69□□□□□ -0.54
VNN3-214ENST00000580813 LCE2CQ5TA81 110 aa11.69□□□□□ -0.54
VNN3-214ENST00000580813 ARHGAP9Q9BRR9 750 aa11.69□□□□□ -0.54
VNN3-214ENST00000580813 MAP4K5Q9Y4K4 846 aa11.69□□□□□ -0.54
VNN3-214ENST00000580813 ERFEQ4G0M1 354 aa11.68□□□□□ -0.54
VNN3-214ENST00000580813 PDXDC2PQ6P474 469 aa11.68□□□□□ -0.54
VNN3-214ENST00000580813 SOBPA7XYQ1 873 aa11.67□□□□□ -0.54
VNN3-214ENST00000580813 WIPF1O43516 503 aa11.67□□□□□ -0.54
VNN3-214ENST00000580813 UPP2O95045 317 aa11.66□□□□□ -0.54
VNN3-214ENST00000580813 BMP2P12643 396 aa11.65□□□□□ -0.54
VNN3-214ENST00000580813 INSM1Q01101 510 aaPredicted RBP11.65□□□□□ -0.54
VNN3-214ENST00000580813 ZBTB33Q86T24 672 aa11.65□□□□□ -0.54
VNN3-214ENST00000580813 CCDC116Q8IYX3 515 aa11.65□□□□□ -0.54
VNN3-214ENST00000580813 SLC10A4Q96EP9 437 aa11.64□□□□□ -0.55
VNN3-214ENST00000580813 EMILIN1Q9Y6C2 1016 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms