RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 ORAI2Q96SN7 254 aa18.74■□□□□ 0.59
CDK5RAP3-219ENST00000580670 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
CDK5RAP3-219ENST00000580670 NLRP13Q86W25 1043 aa18.73■□□□□ 0.59
CDK5RAP3-219ENST00000580670 NRKQ7Z2Y5 1582 aa18.73■□□□□ 0.59
CDK5RAP3-219ENST00000580670 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
CDK5RAP3-219ENST00000580670 TTC21BQ7Z4L5 1316 aa18.72■□□□□ 0.59
CDK5RAP3-219ENST00000580670 NME9Q86XW9 330 aa18.71■□□□□ 0.59
CDK5RAP3-219ENST00000580670 LTBP4Q8N2S1 1624 aa18.71■□□□□ 0.59
CDK5RAP3-219ENST00000580670 BRD4O60885 1362 aaPredicted RBP18.71■□□□□ 0.59
CDK5RAP3-219ENST00000580670 ANKRD26Q9UPS8 1709 aa18.71■□□□□ 0.59
CDK5RAP3-219ENST00000580670 SSH2Q76I76 1423 aa18.71■□□□□ 0.59
CDK5RAP3-219ENST00000580670 TNNT2P45379 298 aaPredicted RBP18.7■□□□□ 0.58
CDK5RAP3-219ENST00000580670 TTC21AQ8NDW8 1320 aa18.69■□□□□ 0.58
CDK5RAP3-219ENST00000580670 KIF1AQ12756 1690 aa18.69■□□□□ 0.58
CDK5RAP3-219ENST00000580670 PSME1Q06323 249 aa18.68■□□□□ 0.58
CDK5RAP3-219ENST00000580670 GTF3C3Q9Y5Q9 886 aa18.68■□□□□ 0.58
CDK5RAP3-219ENST00000580670 FOXO3O43524 673 aa18.68■□□□□ 0.58
CDK5RAP3-219ENST00000580670 ZRANB1Q9UGI0 708 aa18.68■□□□□ 0.58
CDK5RAP3-219ENST00000580670 COG3Q96JB2 828 aa18.67■□□□□ 0.58
CDK5RAP3-219ENST00000580670 SLAIN2Q9P270 581 aa18.66■□□□□ 0.58
CDK5RAP3-219ENST00000580670 PAK3O75914 559 aaPredicted RBP18.65■□□□□ 0.58
CDK5RAP3-219ENST00000580670 YTHDC1Q96MU7 727 aaKnown RBP18.64■□□□□ 0.57
CDK5RAP3-219ENST00000580670 XPCQ01831 940 aaPredicted RBP18.63■□□□□ 0.57
CDK5RAP3-219ENST00000580670 OVOS2A0A0J9YW53 1432 aa18.62■□□□□ 0.57
CDK5RAP3-219ENST00000580670 OVOS2Q6IE36 1432 aa18.62■□□□□ 0.57
CDK5RAP3-219ENST00000580670 BRINP3Q76B58 766 aa18.62■□□□□ 0.57
CDK5RAP3-219ENST00000580670 KRT28Q7Z3Y7 464 aa18.62■□□□□ 0.57
CDK5RAP3-219ENST00000580670 FAM9BQ8IZU0 186 aa18.62■□□□□ 0.57
CDK5RAP3-219ENST00000580670 PIK3C2AO00443 1686 aa18.62■□□□□ 0.57
CDK5RAP3-219ENST00000580670 ABTB2Q8N961 1025 aa18.61■□□□□ 0.57
CDK5RAP3-219ENST00000580670 MTHFSP49914 203 aa18.6■□□□□ 0.57
CDK5RAP3-219ENST00000580670 PNISRQ8TF01 805 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-219ENST00000580670 USP31Q70CQ4 1352 aa18.6■□□□□ 0.57
CDK5RAP3-219ENST00000580670 NPHP3Q7Z494 1330 aa18.6■□□□□ 0.57
CDK5RAP3-219ENST00000580670 NLRP6P59044 892 aa18.6■□□□□ 0.57
CDK5RAP3-219ENST00000580670 DDX17Q92841 729 aaKnown RBP18.6■□□□□ 0.57
CDK5RAP3-219ENST00000580670 NUTM2GQ5VZR2 741 aa18.59■□□□□ 0.57
CDK5RAP3-219ENST00000580670 FBLN1P23142 703 aa18.58■□□□□ 0.57
CDK5RAP3-219ENST00000580670 TRPM3Q9HCF6 1732 aaPredicted RBP18.58■□□□□ 0.57
CDK5RAP3-219ENST00000580670 AATKQ6ZMQ8 1374 aa18.57■□□□□ 0.56
CDK5RAP3-219ENST00000580670 MYT1Q01538 1121 aa18.57■□□□□ 0.56
CDK5RAP3-219ENST00000580670 CFAP53Q96M91 514 aa18.56■□□□□ 0.56
CDK5RAP3-219ENST00000580670 LMOD2Q6P5Q4 547 aa18.55■□□□□ 0.56
CDK5RAP3-219ENST00000580670 POLKQ9UBT6 870 aa18.55■□□□□ 0.56
CDK5RAP3-219ENST00000580670 USP54Q70EL1 1684 aa18.55■□□□□ 0.56
CDK5RAP3-219ENST00000580670 MAP2P11137 1827 aaKnown RBP18.55■□□□□ 0.56
CDK5RAP3-219ENST00000580670 PXDNQ92626 1479 aa18.55■□□□□ 0.56
CDK5RAP3-219ENST00000580670 SBNO1A3KN83 1393 aa18.54■□□□□ 0.56
CDK5RAP3-219ENST00000580670 MARF1Q9Y4F3 1742 aaKnown RBP18.54■□□□□ 0.56
CDK5RAP3-219ENST00000580670 SOX12O15370 315 aa18.54■□□□□ 0.56
CDK5RAP3-219ENST00000580670 PPM1GO15355 546 aaPredicted RBP18.53■□□□□ 0.56
CDK5RAP3-219ENST00000580670 RRS1Q15050 365 aaKnown RBP18.53■□□□□ 0.56
CDK5RAP3-219ENST00000580670 EMILIN1Q9Y6C2 1016 aa18.53■□□□□ 0.56
CDK5RAP3-219ENST00000580670 WDR43Q15061 677 aaKnown RBP eCLIP18.53■□□□□ 0.56
CDK5RAP3-219ENST00000580670 SMG6Q86US8 1419 aaKnown RBP18.52■□□□□ 0.55
CDK5RAP3-219ENST00000580670 ALS2Q96Q42 1657 aa18.51■□□□□ 0.55
CDK5RAP3-219ENST00000580670 SOS2Q07890 1332 aaPredicted RBP18.5■□□□□ 0.55
CDK5RAP3-219ENST00000580670 TNS3Q68CZ2 1445 aa18.5■□□□□ 0.55
CDK5RAP3-219ENST00000580670 PNPLA6Q8IY17 1366 aa18.5■□□□□ 0.55
CDK5RAP3-219ENST00000580670 ROBO1Q9Y6N7 1651 aa18.49■□□□□ 0.55
CDK5RAP3-219ENST00000580670 NHSL1Q5SYE7 1610 aa18.49■□□□□ 0.55
CDK5RAP3-219ENST00000580670 SPATA31A3Q5VYP0 1347 aa18.49■□□□□ 0.55
CDK5RAP3-219ENST00000580670 TOM1O60784 492 aa18.49■□□□□ 0.55
CDK5RAP3-219ENST00000580670 ADAMTS8Q9UP79 889 aa18.49■□□□□ 0.55
CDK5RAP3-219ENST00000580670 COL3A1P02461 1466 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP3-219ENST00000580670 CDK12Q9NYV4 1490 aaPredicted RBP18.48■□□□□ 0.55
CDK5RAP3-219ENST00000580670 INSRP06213 1382 aa18.48■□□□□ 0.55
CDK5RAP3-219ENST00000580670 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
CDK5RAP3-219ENST00000580670 SHPRHQ149N8 1683 aa18.48■□□□□ 0.55
CDK5RAP3-219ENST00000580670 KCNH5Q8NCM2 988 aa18.47■□□□□ 0.55
CDK5RAP3-219ENST00000580670 ARHGEF10O15013 1369 aa18.47■□□□□ 0.55
CDK5RAP3-219ENST00000580670 USP19O94966 1318 aa18.47■□□□□ 0.55
CDK5RAP3-219ENST00000580670 MAP3K19Q56UN5 1328 aa18.47■□□□□ 0.55
CDK5RAP3-219ENST00000580670 HNRNPUQ00839 825 aaKnown RBP eCLIP18.47■□□□□ 0.55
CDK5RAP3-219ENST00000580670 IQSEC2Q5JU85 1478 aa18.47■□□□□ 0.55
CDK5RAP3-219ENST00000580670 SLIT3O75094 1523 aa18.46■□□□□ 0.55
CDK5RAP3-219ENST00000580670 DIAPH1O60610 1272 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-219ENST00000580670 NUDCQ9Y266 331 aa18.45■□□□□ 0.54
CDK5RAP3-219ENST00000580670 NFAT5O94916 1531 aa18.45■□□□□ 0.54
CDK5RAP3-219ENST00000580670 UBAP1LF5GYI3 381 aa18.45■□□□□ 0.54
CDK5RAP3-219ENST00000580670 CERKQ8TCT0 537 aa18.45■□□□□ 0.54
CDK5RAP3-219ENST00000580670 PEAK1Q9H792 1746 aa18.44■□□□□ 0.54
CDK5RAP3-219ENST00000580670 GCP02774 474 aa18.44■□□□□ 0.54
CDK5RAP3-219ENST00000580670 AMPHP49418 695 aa18.44■□□□□ 0.54
CDK5RAP3-219ENST00000580670 PIP4K2BP78356 416 aa18.44■□□□□ 0.54
CDK5RAP3-219ENST00000580670 MED1Q15648 1581 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-219ENST00000580670 AHDC1Q5TGY3 1603 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-219ENST00000580670 BLMP54132 1417 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-219ENST00000580670 U2SURPO15042 1029 aaKnown RBP18.42■□□□□ 0.54
CDK5RAP3-219ENST00000580670 FLT4P35916 1363 aa18.42■□□□□ 0.54
CDK5RAP3-219ENST00000580670 U2AF1L5P0DN76 240 aaPredicted RBP18.42■□□□□ 0.54
CDK5RAP3-219ENST00000580670 U2AF1Q01081 240 aaKnown RBP eCLIP18.42■□□□□ 0.546e-9■■■□□ 17
CDK5RAP3-219ENST00000580670 HSP90AB2PQ58FF8 381 aa18.41■□□□□ 0.54
CDK5RAP3-219ENST00000580670 KIF24Q5T7B8 1368 aa18.41■□□□□ 0.54
CDK5RAP3-219ENST00000580670 LTN1O94822 1766 aa18.41■□□□□ 0.54
CDK5RAP3-219ENST00000580670 ZBTB7CA1YPR0 619 aa18.4■□□□□ 0.54
CDK5RAP3-219ENST00000580670 IL13P35225 146 aa18.4■□□□□ 0.54
CDK5RAP3-219ENST00000580670 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
CDK5RAP3-219ENST00000580670 HOXC9P31274 260 aa18.4■□□□□ 0.54
CDK5RAP3-219ENST00000580670 PHRF1Q9P1Y6 1649 aaKnown RBP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms