RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 KRT27Q7Z3Y8 459 aa35.59■■■■□ 3.29
CDC42EP4-205ENST00000580315 DEFB132Q7Z7B7 95 aa35.59■■■■□ 3.29
CDC42EP4-205ENST00000580315 TONSLQ96HA7 1378 aa35.59■■■■□ 3.29
CDC42EP4-205ENST00000580315 SF3B2Q13435 895 aaKnown RBP35.57■■■■□ 3.28
CDC42EP4-205ENST00000580315 ARHGEF28Q8N1W1 1705 aaKnown RBP35.57■■■■□ 3.28
CDC42EP4-205ENST00000580315 PCGF6Q9BYE7 350 aa35.56■■■■□ 3.28
CDC42EP4-205ENST00000580315 BTG4Q9NY30 223 aa35.56■■■■□ 3.28
CDC42EP4-205ENST00000580315 ALS2Q96Q42 1657 aa35.54■■■■□ 3.28
CDC42EP4-205ENST00000580315 NGDNQ8NEJ9 315 aaKnown RBP35.53■■■■□ 3.28
CDC42EP4-205ENST00000580315 A0A0G2JS52 829 aa35.51■■■■□ 3.28
CDC42EP4-205ENST00000580315 MYT1Q01538 1121 aa35.51■■■■□ 3.28
CDC42EP4-205ENST00000580315 FAM98CQ17RN3 349 aaKnown RBP35.51■■■■□ 3.28
CDC42EP4-205ENST00000580315 ROCK2O75116 1388 aaKnown RBP35.5■■■■□ 3.27
CDC42EP4-205ENST00000580315 NRAPQ86VF7 1730 aa35.49■■■■□ 3.27
CDC42EP4-205ENST00000580315 PAK3O75914 559 aaPredicted RBP35.49■■■■□ 3.27
CDC42EP4-205ENST00000580315 TRPM1Q7Z4N2 1603 aa35.47■■■■□ 3.27
CDC42EP4-205ENST00000580315 COL14A1Q05707 1796 aaKnown RBP35.47■■■■□ 3.27
CDC42EP4-205ENST00000580315 CENPJQ9HC77 1338 aaPredicted RBP35.47■■■■□ 3.27
CDC42EP4-205ENST00000580315 NUDT16Q96DE0 195 aaKnown RBP35.44■■■■□ 3.26
CDC42EP4-205ENST00000580315 SPATA31A5Q5VU36 1347 aa35.43■■■■□ 3.26
CDC42EP4-205ENST00000580315 SPATA31A7Q8IWB4 1347 aa35.43■■■■□ 3.26
CDC42EP4-205ENST00000580315 NBPF8Q3BBV2 869 aa35.43■■■■□ 3.26
CDC42EP4-205ENST00000580315 ATP7BP35670 1465 aa35.42■■■■□ 3.26
CDC42EP4-205ENST00000580315 CDK19Q9BWU1 502 aa35.41■■■■□ 3.26
CDC42EP4-205ENST00000580315 PRDM11Q9NQV5 511 aa35.41■■■■□ 3.26
CDC42EP4-205ENST00000580315 CRYBG1Q9Y4K1 1723 aa35.4■■■■□ 3.26
CDC42EP4-205ENST00000580315 BAG6P46379 1132 aa35.37■■■■□ 3.25
CDC42EP4-205ENST00000580315 KIAA0232Q92628 1395 aa35.35■■■■□ 3.25
CDC42EP4-205ENST00000580315 CLSPNQ9HAW4 1339 aa35.34■■■■□ 3.25
CDC42EP4-205ENST00000580315 FAM182BQ5T319 152 aa35.34■■■■□ 3.25
CDC42EP4-205ENST00000580315 ITSN1Q15811 1721 aa35.34■■■■□ 3.25
CDC42EP4-205ENST00000580315 CARD11Q9BXL7 1154 aa35.32■■■■□ 3.24
CDC42EP4-205ENST00000580315 SRPK2P78362 688 aaKnown RBP35.31■■■■□ 3.24
CDC42EP4-205ENST00000580315 CHRNA2Q15822 529 aa35.31■■■■□ 3.24
CDC42EP4-205ENST00000580315 POLR3AO14802 1390 aaPredicted RBP35.3■■■■□ 3.24
CDC42EP4-205ENST00000580315 NUTM2GQ5VZR2 741 aa35.3■■■■□ 3.24
CDC42EP4-205ENST00000580315 CCDC61Q9Y6R9 512 aa35.3■■■■□ 3.24
CDC42EP4-205ENST00000580315 ACEP12821 1306 aa35.3■■■■□ 3.24
CDC42EP4-205ENST00000580315 THSD7AQ9UPZ6 1657 aa35.29■■■■□ 3.24
CDC42EP4-205ENST00000580315 SPATA31A1Q5TZJ5 1347 aa35.29■■■■□ 3.24
CDC42EP4-205ENST00000580315 QRICH2Q9H0J4 1663 aa35.28■■■■□ 3.24
CDC42EP4-205ENST00000580315 ZC3H6P61129 1189 aaKnown RBP35.28■■■■□ 3.24
CDC42EP4-205ENST00000580315 EN1Q05925 392 aaPredicted RBP35.27■■■■□ 3.24
CDC42EP4-205ENST00000580315 PLEKHG3A1L390 1219 aa35.26■■■■□ 3.24
CDC42EP4-205ENST00000580315 STRN4Q9NRL3 753 aa35.26■■■■□ 3.24
CDC42EP4-205ENST00000580315 PSDA5PKW4 1024 aaPredicted RBP35.25■■■■□ 3.23
CDC42EP4-205ENST00000580315 EVC2Q86UK5 1308 aa35.25■■■■□ 3.23
CDC42EP4-205ENST00000580315 PHRF1Q9P1Y6 1649 aaKnown RBP35.24■■■■□ 3.23
CDC42EP4-205ENST00000580315 CABP2Q9NPB3 220 aa35.23■■■■□ 3.23
CDC42EP4-205ENST00000580315 TOPAZ1Q8N9V7 1692 aa35.23■■■■□ 3.23
CDC42EP4-205ENST00000580315 TIMELESSQ9UNS1 1208 aa35.22■■■■□ 3.23
CDC42EP4-205ENST00000580315 RGPD1P0DJD0 1748 aa35.2■■■■□ 3.23
CDC42EP4-205ENST00000580315 LRP5O75197 1615 aa35.2■■■■□ 3.23
CDC42EP4-205ENST00000580315 DISP2A7MBM2 1401 aa35.19■■■■□ 3.22
CDC42EP4-205ENST00000580315 ABTB2Q8N961 1025 aa35.19■■■■□ 3.22
CDC42EP4-205ENST00000580315 CCER1Q8TC90 406 aaPredicted RBP35.18■■■■□ 3.22
CDC42EP4-205ENST00000580315 USP35Q9P2H5 1018 aa35.17■■■■□ 3.22
CDC42EP4-205ENST00000580315 PPIP5K1Q6PFW1 1433 aa35.16■■■■□ 3.22
CDC42EP4-205ENST00000580315 EVA1CP58658 441 aa35.16■■■■□ 3.22
CDC42EP4-205ENST00000580315 FAM196AQ6ZSG2 479 aa35.16■■■■□ 3.22
CDC42EP4-205ENST00000580315 SSH2Q76I76 1423 aa35.15■■■■□ 3.22
CDC42EP4-205ENST00000580315 USP19O94966 1318 aa35.13■■■■□ 3.21
CDC42EP4-205ENST00000580315 TRIM37O94972 964 aa35.13■■■■□ 3.21
CDC42EP4-205ENST00000580315 BARGINQ6ZT62 677 aa35.13■■■■□ 3.21
CDC42EP4-205ENST00000580315 NRKQ7Z2Y5 1582 aa35.13■■■■□ 3.21
CDC42EP4-205ENST00000580315 CPDO75976 1380 aa35.13■■■■□ 3.21
CDC42EP4-205ENST00000580315 SBNO2Q9Y2G9 1366 aa35.13■■■■□ 3.21
CDC42EP4-205ENST00000580315 EZH2Q15910 746 aaKnown RBP35.12■■■■□ 3.21
CDC42EP4-205ENST00000580315 TNS1Q9HBL0 1735 aaKnown RBP35.12■■■■□ 3.21
CDC42EP4-205ENST00000580315 CAMTA1Q9Y6Y1 1673 aa35.11■■■■□ 3.21
CDC42EP4-205ENST00000580315 LARP1Q6PKG0 1096 aaKnown RBP35.11■■■■□ 3.21
CDC42EP4-205ENST00000580315 R3HDM1Q15032 1099 aaKnown RBP35.1■■■■□ 3.21
CDC42EP4-205ENST00000580315 NLRP13Q86W25 1043 aa35.09■■■■□ 3.21
CDC42EP4-205ENST00000580315 CAMKK2Q96RR4 588 aa35.09■■■■□ 3.21
CDC42EP4-205ENST00000580315 CABP1Q9NZU7 370 aa35.09■■■■□ 3.21
CDC42EP4-205ENST00000580315 GCP02774 474 aa35.08■■■■□ 3.21
CDC42EP4-205ENST00000580315 PDE3BQ13370 1112 aa35.07■■■■□ 3.2
CDC42EP4-205ENST00000580315 TCP11L2Q8N4U5 519 aa35.07■■■■□ 3.2
CDC42EP4-205ENST00000580315 LMO7Q8WWI1 1683 aa35.05■■■■□ 3.2
CDC42EP4-205ENST00000580315 APBA3O96018 575 aa35.04■■■■□ 3.2
CDC42EP4-205ENST00000580315 BRD4O60885 1362 aaPredicted RBP35.02■■■■□ 3.2
CDC42EP4-205ENST00000580315 THRAP3Q9Y2W1 955 aaKnown RBP35.01■■■■□ 3.2
CDC42EP4-205ENST00000580315 PARD3Q8TEW0 1356 aa35■■■■□ 3.19
CDC42EP4-205ENST00000580315 SLC24A1O60721 1099 aa34.99■■■■□ 3.19
CDC42EP4-205ENST00000580315 ST20-MTHFSA0A0A6YYL1 179 aa34.98■■■■□ 3.19
CDC42EP4-205ENST00000580315 COL5A2P05997 1499 aaPredicted RBP34.97■■■■□ 3.19
CDC42EP4-205ENST00000580315 USP6P35125 1406 aa34.97■■■■□ 3.19
CDC42EP4-205ENST00000580315 NLRP6P59044 892 aa34.95■■■■□ 3.19
CDC42EP4-205ENST00000580315 ZNF692Q9BU19 519 aaPredicted RBP34.95■■■■□ 3.19
CDC42EP4-205ENST00000580315 USP47Q96K76 1375 aa34.93■■■■□ 3.18
CDC42EP4-205ENST00000580315 CRB1P82279 1406 aa34.91■■■■□ 3.18
CDC42EP4-205ENST00000580315 ZBTB7CA1YPR0 619 aa34.91■■■■□ 3.18
CDC42EP4-205ENST00000580315 PUS7Q96PZ0 661 aaKnown RBP34.91■■■■□ 3.18
CDC42EP4-205ENST00000580315 TESK2Q96S53 571 aa34.91■■■■□ 3.18
CDC42EP4-205ENST00000580315 AATKQ6ZMQ8 1374 aa34.9■■■■□ 3.18
CDC42EP4-205ENST00000580315 SLIT3O75094 1523 aa34.88■■■■□ 3.17
CDC42EP4-205ENST00000580315 TMC1Q8TDI8 760 aa34.87■■■■□ 3.17
CDC42EP4-205ENST00000580315 PARP4Q9UKK3 1724 aaKnown RBP34.86■■■■□ 3.17
CDC42EP4-205ENST00000580315 C11orf95C9JLR9 678 aaPredicted RBP34.85■■■■□ 3.17
CDC42EP4-205ENST00000580315 RREB1Q92766 1687 aa34.85■■■■□ 3.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms