RNA–Protein interactions for RNA: ENST00000580231.5

SENP3-203, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 901 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-203ENST00000580231 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
SENP3-203ENST00000580231 EFCAB6Q5THR3 1501 aa12.47□□□□□ -0.41
SENP3-203ENST00000580231 ST20-MTHFSA0A0A6YYL1 179 aa12.46□□□□□ -0.41
SENP3-203ENST00000580231 HRO43593 1189 aa12.46□□□□□ -0.41
SENP3-203ENST00000580231 LARP6Q9BRS8 491 aaKnown RBP12.46□□□□□ -0.41
SENP3-203ENST00000580231 SLC24A1O60721 1099 aa12.45□□□□□ -0.42
SENP3-203ENST00000580231 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
SENP3-203ENST00000580231 RICTORQ6R327 1708 aa12.45□□□□□ -0.42
SENP3-203ENST00000580231 CLTCL1P53675 1640 aa12.44□□□□□ -0.42
SENP3-203ENST00000580231 RAPGEF3O95398 923 aa12.44□□□□□ -0.42
SENP3-203ENST00000580231 DDX27Q96GQ7 796 aaKnown RBP12.44□□□□□ -0.42
SENP3-203ENST00000580231 KCNK17Q96T54 332 aa12.44□□□□□ -0.42
SENP3-203ENST00000580231 ABCA6Q8N139 1617 aa12.44□□□□□ -0.42
SENP3-203ENST00000580231 MFSD10Q14728 455 aa12.43□□□□□ -0.42
SENP3-203ENST00000580231 ZNF454Q8N9F8 522 aa12.43□□□□□ -0.42
SENP3-203ENST00000580231 WASHC2CQ9Y4E1 1318 aa12.42□□□□□ -0.42
SENP3-203ENST00000580231 NBPF1Q3BBV0 1214 aa12.42□□□□□ -0.42
SENP3-203ENST00000580231 ANO8Q9HCE9 1232 aaPredicted RBP12.42□□□□□ -0.42
SENP3-203ENST00000580231 DIP2CQ9Y2E4 1556 aa12.42□□□□□ -0.42
SENP3-203ENST00000580231 ZMYM4Q5VZL5 1548 aa12.42□□□□□ -0.42
SENP3-203ENST00000580231 KIF1BO60333 1816 aa12.41□□□□□ -0.42
SENP3-203ENST00000580231 RPGRIP1LQ68CZ1 1315 aa12.41□□□□□ -0.42
SENP3-203ENST00000580231 FOSBP53539 338 aa12.41□□□□□ -0.42
SENP3-203ENST00000580231 ARHGAP31Q2M1Z3 1444 aa12.41□□□□□ -0.42
SENP3-203ENST00000580231 GGT6Q6P531 493 aa12.41□□□□□ -0.42
SENP3-203ENST00000580231 KIAA1210Q9ULL0 1709 aa12.41□□□□□ -0.42
SENP3-203ENST00000580231 KTN1Q86UP2 1357 aaKnown RBP12.41□□□□□ -0.42
SENP3-203ENST00000580231 BCL2L12Q9HB09 334 aa12.4□□□□□ -0.42
SENP3-203ENST00000580231 ADAMTSL3P82987 1691 aa12.4□□□□□ -0.42
SENP3-203ENST00000580231 ARHGEF40Q8TER5 1519 aa12.4□□□□□ -0.42
SENP3-203ENST00000580231 MADDQ8WXG6 1647 aa12.4□□□□□ -0.42
SENP3-203ENST00000580231 MYOM2P54296 1465 aa12.4□□□□□ -0.43
SENP3-203ENST00000580231 ABCC3O15438 1527 aa12.39□□□□□ -0.43
SENP3-203ENST00000580231 EVI5O60447 810 aa12.39□□□□□ -0.43
SENP3-203ENST00000580231 HCSTQ9UBK5 93 aa12.39□□□□□ -0.43
SENP3-203ENST00000580231 TMF1P82094 1093 aa12.38□□□□□ -0.43
SENP3-203ENST00000580231 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
SENP3-203ENST00000580231 TESK2Q96S53 571 aa12.38□□□□□ -0.43
SENP3-203ENST00000580231 ZC3H13Q5T200 1668 aaKnown RBP12.38□□□□□ -0.43
SENP3-203ENST00000580231 NPATQ14207 1427 aa12.37□□□□□ -0.43
SENP3-203ENST00000580231 SIGLEC1Q9BZZ2 1709 aa12.37□□□□□ -0.43
SENP3-203ENST00000580231 CADPS2Q86UW7 1296 aa12.37□□□□□ -0.43
SENP3-203ENST00000580231 REREQ9P2R6 1566 aa12.37□□□□□ -0.43
SENP3-203ENST00000580231 NOS1P29475 1434 aa12.37□□□□□ -0.43
SENP3-203ENST00000580231 SCAF11Q99590 1463 aaKnown RBP12.36□□□□□ -0.43
SENP3-203ENST00000580231 RALBP1Q15311 655 aa12.36□□□□□ -0.43
SENP3-203ENST00000580231 POLR3GLQ9BT43 218 aa12.36□□□□□ -0.43
SENP3-203ENST00000580231 VPS9D1Q9Y2B5 631 aa12.36□□□□□ -0.43
SENP3-203ENST00000580231 NRXN1Q9ULB1 1477 aa12.35□□□□□ -0.43
SENP3-203ENST00000580231 EIF3AQ14152 1382 aaKnown RBP12.35□□□□□ -0.43
SENP3-203ENST00000580231 EMILIN3Q9NT22 766 aa12.35□□□□□ -0.43
SENP3-203ENST00000580231 SLC52A1Q9NWF4 448 aa12.35□□□□□ -0.43
SENP3-203ENST00000580231 CAMSAP1Q5T5Y3 1602 aa12.35□□□□□ -0.43
SENP3-203ENST00000580231 ADGRB3O60242 1522 aa12.35□□□□□ -0.43
SENP3-203ENST00000580231 AGLP35573 1532 aa12.35□□□□□ -0.43
SENP3-203ENST00000580231 YEATS2Q9ULM3 1422 aa12.35□□□□□ -0.43
SENP3-203ENST00000580231 PTPRMP28827 1452 aa12.34□□□□□ -0.43
SENP3-203ENST00000580231 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
SENP3-203ENST00000580231 SLC4A5Q9BY07 1137 aa12.34□□□□□ -0.43
SENP3-203ENST00000580231 IQGAP1P46940 1657 aa12.34□□□□□ -0.43
SENP3-203ENST00000580231 IFT172Q9UG01 1749 aa12.34□□□□□ -0.43
SENP3-203ENST00000580231 RIMS1Q86UR5 1692 aaKnown RBP12.33□□□□□ -0.44
SENP3-203ENST00000580231 PTPREP23469 700 aa12.33□□□□□ -0.44
SENP3-203ENST00000580231 MRS2Q9HD23 443 aa12.33□□□□□ -0.44
SENP3-203ENST00000580231 ZDHHC16Q969W1 377 aa12.31□□□□□ -0.44
SENP3-203ENST00000580231 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
SENP3-203ENST00000580231 UGGT1Q9NYU2 1555 aa12.3□□□□□ -0.44
SENP3-203ENST00000580231 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
SENP3-203ENST00000580231 PIK3C2BO00750 1634 aa12.3□□□□□ -0.44
SENP3-203ENST00000580231 PER1O15534 1290 aaPredicted RBP12.3□□□□□ -0.44
SENP3-203ENST00000580231 ADAM33Q9BZ11 813 aa12.3□□□□□ -0.44
SENP3-203ENST00000580231 C14orf93Q9H972 538 aaKnown RBP12.3□□□□□ -0.44
SENP3-203ENST00000580231 ADGRF5Q8IZF2 1346 aa12.3□□□□□ -0.44
SENP3-203ENST00000580231 ZFYVE9O95405 1425 aa12.29□□□□□ -0.44
SENP3-203ENST00000580231 CFAP70Q5T0N1 1121 aa12.29□□□□□ -0.44
SENP3-203ENST00000580231 PLA2G2EQ9NZK7 142 aa12.29□□□□□ -0.44
SENP3-203ENST00000580231 MYBBP1AQ9BQG0 1328 aaKnown RBP12.29□□□□□ -0.44
SENP3-203ENST00000580231 BRD4O60885 1362 aaPredicted RBP12.29□□□□□ -0.44
SENP3-203ENST00000580231 DISP3Q9P2K9 1392 aa12.29□□□□□ -0.44
SENP3-203ENST00000580231 PPLO60437 1756 aa12.28□□□□□ -0.44
SENP3-203ENST00000580231 HNRNPUQ00839 825 aaKnown RBP eCLIP12.28□□□□□ -0.44
SENP3-203ENST00000580231 CCDC184Q52MB2 194 aa12.28□□□□□ -0.44
SENP3-203ENST00000580231 ZBED2Q9BTP6 218 aa12.28□□□□□ -0.44
SENP3-203ENST00000580231 MROH2AA6NES4 1674 aa12.28□□□□□ -0.44
SENP3-203ENST00000580231 SBNO2Q9Y2G9 1366 aa12.28□□□□□ -0.44
SENP3-203ENST00000580231 CFAP65Q6ZU64 1925 aaKnown RBP12.27□□□□□ -0.44
SENP3-203ENST00000580231 BHMG1C9JSJ3 638 aaPredicted RBP12.27□□□□□ -0.45
SENP3-203ENST00000580231 FER1L4A9Z1Z3 1794 aa12.27□□□□□ -0.45
SENP3-203ENST00000580231 SYNMO15061 1565 aa12.26□□□□□ -0.45
SENP3-203ENST00000580231 IDI1Q13907 227 aa12.26□□□□□ -0.45
SENP3-203ENST00000580231 TMC1Q8TDI8 760 aa12.26□□□□□ -0.45
SENP3-203ENST00000580231 PIK3C2GO75747 1445 aa12.26□□□□□ -0.45
SENP3-203ENST00000580231 FAM9BQ8IZU0 186 aa12.25□□□□□ -0.45
SENP3-203ENST00000580231 BBXQ8WY36 941 aaPredicted RBP12.25□□□□□ -0.45
SENP3-203ENST00000580231 PANK3Q9H999 370 aa12.25□□□□□ -0.45
SENP3-203ENST00000580231 PCDHGA10Q9Y5H3 936 aa12.25□□□□□ -0.45
SENP3-203ENST00000580231 PARD3Q8TEW0 1356 aa12.25□□□□□ -0.45
SENP3-203ENST00000580231 CAMK2BQ13554 666 aa12.24□□□□□ -0.45
SENP3-203ENST00000580231 ZBED9Q6R2W3 1325 aa12.24□□□□□ -0.45
SENP3-203ENST00000580231 NLRP13Q86W25 1043 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms