RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 PLSCR1O15162 318 aa9.87□□□□□ -0.83
CCDC178-209ENST00000579947 BTG4Q9NY30 223 aa9.87□□□□□ -0.83
CCDC178-209ENST00000579947 MYOM3Q5VTT5 1437 aa9.87□□□□□ -0.83
CCDC178-209ENST00000579947 GRIN3BO60391 1043 aa9.87□□□□□ -0.83
CCDC178-209ENST00000579947 PEAK1Q9H792 1746 aa9.86□□□□□ -0.83
CCDC178-209ENST00000579947 SBNO1A3KN83 1393 aa9.86□□□□□ -0.83
CCDC178-209ENST00000579947 C11orf95C9JLR9 678 aaPredicted RBP9.86□□□□□ -0.83
CCDC178-209ENST00000579947 CABLES1Q8TDN4 633 aa9.86□□□□□ -0.83
CCDC178-209ENST00000579947 ARHGEF10O15013 1369 aa9.85□□□□□ -0.83
CCDC178-209ENST00000579947 SPATA31A1Q5TZJ5 1347 aa9.85□□□□□ -0.83
CCDC178-209ENST00000579947 FMN2Q9NZ56 1722 aa9.85□□□□□ -0.83
CCDC178-209ENST00000579947 KIF3CO14782 793 aa9.85□□□□□ -0.83
CCDC178-209ENST00000579947 SBF2Q86WG5 1849 aa9.85□□□□□ -0.83
CCDC178-209ENST00000579947 KRT28Q7Z3Y7 464 aa9.84□□□□□ -0.83
CCDC178-209ENST00000579947 RRP7BPQ9NSQ0 103 aa9.84□□□□□ -0.83
CCDC178-209ENST00000579947 E9PCH4 1651 aa9.84□□□□□ -0.83
CCDC178-209ENST00000579947 KIAA1210Q9ULL0 1709 aa9.83□□□□□ -0.84
CCDC178-209ENST00000579947 CRYBG1Q9Y4K1 1723 aa9.83□□□□□ -0.84
CCDC178-209ENST00000579947 STK32BQ9NY57 414 aa9.83□□□□□ -0.84
CCDC178-209ENST00000579947 ARHGEF28Q8N1W1 1705 aaKnown RBP9.82□□□□□ -0.84
CCDC178-209ENST00000579947 PARP4Q9UKK3 1724 aaKnown RBP9.82□□□□□ -0.84
CCDC178-209ENST00000579947 PELP1Q8IZL8 1130 aaKnown RBP9.82□□□□□ -0.84
CCDC178-209ENST00000579947 PSME1Q06323 249 aa9.82□□□□□ -0.84
CCDC178-209ENST00000579947 PDE3BQ13370 1112 aa9.82□□□□□ -0.84
CCDC178-209ENST00000579947 BCL11BQ9C0K0 894 aaPredicted RBP9.82□□□□□ -0.84
CCDC178-209ENST00000579947 SLC15A2Q16348 729 aa9.81□□□□□ -0.84
CCDC178-209ENST00000579947 BARGINQ6ZT62 677 aa9.81□□□□□ -0.84
CCDC178-209ENST00000579947 NAIPQ13075 1403 aa9.81□□□□□ -0.84
CCDC178-209ENST00000579947 YBX3P16989 372 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCDC178-209ENST00000579947 DHX57Q6P158 1386 aaKnown RBP9.8□□□□□ -0.84
CCDC178-209ENST00000579947 TOPAZ1Q8N9V7 1692 aa9.79□□□□□ -0.84
CCDC178-209ENST00000579947 UTRNP46939 3433 aa9.79□□□□□ -0.84
CCDC178-209ENST00000579947 TECPR2O15040 1411 aa9.79□□□□□ -0.84
CCDC178-209ENST00000579947 PAPPAQ13219 1627 aa9.79□□□□□ -0.84
CCDC178-209ENST00000579947 ALS2Q96Q42 1657 aa9.79□□□□□ -0.84
CCDC178-209ENST00000579947 TRPM3Q9HCF6 1732 aaPredicted RBP9.79□□□□□ -0.84
CCDC178-209ENST00000579947 TULP4Q9NRJ4 1543 aa9.79□□□□□ -0.84
CCDC178-209ENST00000579947 QSER1Q2KHR3 1735 aa9.78□□□□□ -0.84
CCDC178-209ENST00000579947 FAM161AQ3B820 660 aa9.78□□□□□ -0.84
CCDC178-209ENST00000579947 PROM2Q8N271 834 aa9.78□□□□□ -0.84
CCDC178-209ENST00000579947 ZNF526Q8TF50 670 aaPredicted RBP9.78□□□□□ -0.84
CCDC178-209ENST00000579947 TOMM70O94826 608 aa9.78□□□□□ -0.84
CCDC178-209ENST00000579947 ATP7BP35670 1465 aa9.77□□□□□ -0.84
CCDC178-209ENST00000579947 NRXN1Q9ULB1 1477 aa9.77□□□□□ -0.85
CCDC178-209ENST00000579947 OVOS2A0A0G2JMS6 1433 aa9.77□□□□□ -0.85
CCDC178-209ENST00000579947 OVOS2A0A0J9YW53 1432 aa9.77□□□□□ -0.85
CCDC178-209ENST00000579947 OVOS2Q6IE36 1432 aa9.77□□□□□ -0.85
CCDC178-209ENST00000579947 ANKRD30AQ9BXX3 1397 aa9.77□□□□□ -0.85
CCDC178-209ENST00000579947 DAPK1P53355 1430 aa9.77□□□□□ -0.85
CCDC178-209ENST00000579947 HSPA1AP0DMV8 641 aaKnown RBP9.76□□□□□ -0.85
CCDC178-209ENST00000579947 HSPA1BP0DMV9 641 aaKnown RBP9.76□□□□□ -0.85
CCDC178-209ENST00000579947 NLGN2Q8NFZ4 835 aa9.76□□□□□ -0.85
CCDC178-209ENST00000579947 IFT172Q9UG01 1749 aa9.75□□□□□ -0.85
CCDC178-209ENST00000579947 RGPD8O14715 1765 aaPredicted RBP9.74□□□□□ -0.85
CCDC178-209ENST00000579947 BCL9O00512 1426 aa9.73□□□□□ -0.85
CCDC178-209ENST00000579947 PLEKHG5O94827 1062 aa9.73□□□□□ -0.85
CCDC178-209ENST00000579947 LRRC37A3O60309 1634 aa9.73□□□□□ -0.85
CCDC178-209ENST00000579947 CLTCL1P53675 1640 aa9.73□□□□□ -0.85
CCDC178-209ENST00000579947 TXNRD1Q16881 649 aa9.72□□□□□ -0.85
CCDC178-209ENST00000579947 RBM46Q8TBY0 533 aaKnown RBP9.72□□□□□ -0.85
CCDC178-209ENST00000579947 KNDC1Q76NI1 1749 aa9.72□□□□□ -0.85
CCDC178-209ENST00000579947 SSH2Q76I76 1423 aa9.72□□□□□ -0.85
CCDC178-209ENST00000579947 POLD1P28340 1107 aa9.72□□□□□ -0.85
CCDC178-209ENST00000579947 KLHL34Q8N239 644 aa9.72□□□□□ -0.85
CCDC178-209ENST00000579947 PHF8Q9UPP1 1060 aa9.72□□□□□ -0.85
CCDC178-209ENST00000579947 SLC16A10Q8TF71 515 aa9.71□□□□□ -0.85
CCDC178-209ENST00000579947 HTRA3P83110 453 aa9.71□□□□□ -0.86
CCDC178-209ENST00000579947 LMOD2Q6P5Q4 547 aa9.71□□□□□ -0.86
CCDC178-209ENST00000579947 THRAP3Q9Y2W1 955 aaKnown RBP9.71□□□□□ -0.86
CCDC178-209ENST00000579947 CICQ96RK0 1608 aaPredicted RBP9.71□□□□□ -0.86
CCDC178-209ENST00000579947 NUTM2FA1L443 756 aa9.7□□□□□ -0.86
CCDC178-209ENST00000579947 FSTL1Q12841 308 aa9.7□□□□□ -0.86
CCDC178-209ENST00000579947 PHRF1Q9P1Y6 1649 aaKnown RBP9.7□□□□□ -0.86
CCDC178-209ENST00000579947 MLLT1Q03111 559 aaPredicted RBP9.7□□□□□ -0.86
CCDC178-209ENST00000579947 RGS19P49795 217 aa9.69□□□□□ -0.86
CCDC178-209ENST00000579947 ZNF326Q5BKZ1 582 aaKnown RBP9.69□□□□□ -0.86
CCDC178-209ENST00000579947 TCP11L2Q8N4U5 519 aa9.69□□□□□ -0.86
CCDC178-209ENST00000579947 PRDM11Q9NQV5 511 aa9.69□□□□□ -0.86
CCDC178-209ENST00000579947 AKAP12Q02952 1782 aa9.68□□□□□ -0.86
CCDC178-209ENST00000579947 WNK3Q9BYP7 1800 aa9.68□□□□□ -0.86
CCDC178-209ENST00000579947 PTF1AQ7RTS3 328 aa9.68□□□□□ -0.86
CCDC178-209ENST00000579947 STRN4Q9NRL3 753 aa9.68□□□□□ -0.86
CCDC178-209ENST00000579947 ANKRD50Q9ULJ7 1429 aa9.68□□□□□ -0.86
CCDC178-209ENST00000579947 LMO7Q8WWI1 1683 aa9.68□□□□□ -0.86
CCDC178-209ENST00000579947 USP19O94966 1318 aa9.67□□□□□ -0.86
CCDC178-209ENST00000579947 PRDM10Q9NQV6 1147 aa9.67□□□□□ -0.86
CCDC178-209ENST00000579947 KIAA0232Q92628 1395 aa9.66□□□□□ -0.86
CCDC178-209ENST00000579947 USP35Q9P2H5 1018 aa9.65□□□□□ -0.86
CCDC178-209ENST00000579947 C10orf71Q711Q0 1435 aa9.65□□□□□ -0.86
CCDC178-209ENST00000579947 NHSQ6T4R5 1651 aa9.65□□□□□ -0.86
CCDC178-209ENST00000579947 KIF1BO60333 1816 aa9.65□□□□□ -0.87
CCDC178-209ENST00000579947 TUBGCP6Q96RT7 1819 aa9.64□□□□□ -0.87
CCDC178-209ENST00000579947 PMFBP1Q8TBY8 1022 aa9.64□□□□□ -0.87
CCDC178-209ENST00000579947 BRD4O60885 1362 aaPredicted RBP9.64□□□□□ -0.87
CCDC178-209ENST00000579947 ANKARQ7Z5J8 1434 aa9.63□□□□□ -0.87
CCDC178-209ENST00000579947 ZNF827Q17R98 1081 aa9.63□□□□□ -0.87
CCDC178-209ENST00000579947 EVA1CP58658 441 aa9.62□□□□□ -0.87
CCDC178-209ENST00000579947 LARP1Q6PKG0 1096 aaKnown RBP9.62□□□□□ -0.87
CCDC178-209ENST00000579947 VGFO15240 615 aaPredicted RBP9.62□□□□□ -0.87
CCDC178-209ENST00000579947 ABHD8Q96I13 439 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms