RNA–Protein interactions for RNA: ENST00000579796.1

ARHGAP28-211, Transcript of Rho GTPase activating protein 28, humanhuman

Gene ARHGAP28, Length 1,960 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-211ENST00000579796 VAMP1P23763 118 aa12.1□□□□□ -0.47
ARHGAP28-211ENST00000579796 UBXN4Q92575 508 aa12.1□□□□□ -0.47
ARHGAP28-211ENST00000579796 HLA-CQ95604 372 aa12.1□□□□□ -0.47
ARHGAP28-211ENST00000579796 EYA1Q99502 592 aa12.1□□□□□ -0.47
ARHGAP28-211ENST00000579796 OCEL1Q9H607 264 aa12.1□□□□□ -0.47
ARHGAP28-211ENST00000579796 SNAPC4Q5SXM2 1469 aa12.1□□□□□ -0.47
ARHGAP28-211ENST00000579796 G3V3G9 751 aa12.1□□□□□ -0.47
ARHGAP28-211ENST00000579796 GUCA2AQ02747 115 aa12.1□□□□□ -0.47
ARHGAP28-211ENST00000579796 GRIN2BQ13224 1484 aa12.09□□□□□ -0.47
ARHGAP28-211ENST00000579796 C3orf80F5H4A9 247 aa12.09□□□□□ -0.47
ARHGAP28-211ENST00000579796 CRTC2Q53ET0 693 aaPredicted RBP12.09□□□□□ -0.47
ARHGAP28-211ENST00000579796 GIMAP6Q6P9H5 292 aa12.09□□□□□ -0.47
ARHGAP28-211ENST00000579796 SULF1Q8IWU6 871 aa12.09□□□□□ -0.47
ARHGAP28-211ENST00000579796 TSC1Q92574 1164 aa12.09□□□□□ -0.47
ARHGAP28-211ENST00000579796 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
ARHGAP28-211ENST00000579796 BIN2Q9UBW5 565 aaPredicted RBP12.09□□□□□ -0.47
ARHGAP28-211ENST00000579796 PRSS12P56730 875 aa12.08□□□□□ -0.48
ARHGAP28-211ENST00000579796 ADAMTS12P58397 1594 aa12.07□□□□□ -0.48
ARHGAP28-211ENST00000579796 IER5LQ5T953 404 aa12.07□□□□□ -0.48
ARHGAP28-211ENST00000579796 FBXO33Q7Z6M2 555 aa12.07□□□□□ -0.48
ARHGAP28-211ENST00000579796 ERICH3Q5RHP9 1530 aa12.07□□□□□ -0.48
ARHGAP28-211ENST00000579796 KIF27Q86VH2 1401 aa12.07□□□□□ -0.48
ARHGAP28-211ENST00000579796 CFAP99D6REC4 459 aa12.07□□□□□ -0.48
ARHGAP28-211ENST00000579796 KDM4AO75164 1064 aa12.07□□□□□ -0.48
ARHGAP28-211ENST00000579796 ZNF326Q5BKZ1 582 aaKnown RBP12.06□□□□□ -0.48
ARHGAP28-211ENST00000579796 HOXA2O43364 376 aa12.05□□□□□ -0.48
ARHGAP28-211ENST00000579796 SLC34A2O95436 690 aa12.05□□□□□ -0.48
ARHGAP28-211ENST00000579796 FDX1P10109 184 aa12.05□□□□□ -0.48
ARHGAP28-211ENST00000579796 NR6A1Q15406 480 aa12.05□□□□□ -0.48
ARHGAP28-211ENST00000579796 JPH4Q96JJ6 628 aa12.05□□□□□ -0.48
ARHGAP28-211ENST00000579796 USP17L3A6NCW0 530 aa12.05□□□□□ -0.48
ARHGAP28-211ENST00000579796 USP17L4A6NCW7 530 aa12.05□□□□□ -0.48
ARHGAP28-211ENST00000579796 USP17L2Q6R6M4 530 aa12.05□□□□□ -0.48
ARHGAP28-211ENST00000579796 USP17L1Q7RTZ2 530 aa12.05□□□□□ -0.48
ARHGAP28-211ENST00000579796 DEPDC4Q8N2C3 294 aa12.05□□□□□ -0.48
ARHGAP28-211ENST00000579796 MAGI1Q96QZ7 1491 aaPredicted RBP12.04□□□□□ -0.48
ARHGAP28-211ENST00000579796 IGF1RP08069 1367 aa12.03□□□□□ -0.48
ARHGAP28-211ENST00000579796 USP17L15C9J2P7 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L10C9JJH3 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L13C9JLJ4 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L12C9JPN9 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L11C9JVI0 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L21D6R901 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L18D6R9N7 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L22D6RA61 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L17D6RBQ6 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L19D6RCP7 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L20D6RJB6 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L24Q0WX57 530 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 ZNF662Q6ZS27 426 aa12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 CLP1Q92989 425 aaKnown RBP12.02□□□□□ -0.49
ARHGAP28-211ENST00000579796 CUL7Q14999 1698 aa12.01□□□□□ -0.49
ARHGAP28-211ENST00000579796 TSNAXIP1Q2TAA8 658 aa12.01□□□□□ -0.49
ARHGAP28-211ENST00000579796 KDM4FA0A1W2PPD8 638 aa12.01□□□□□ -0.49
ARHGAP28-211ENST00000579796 FAM196BA6NMK8 535 aa12.01□□□□□ -0.49
ARHGAP28-211ENST00000579796 PLCG2P16885 1265 aa12.01□□□□□ -0.49
ARHGAP28-211ENST00000579796 FOSBP53539 338 aa12.01□□□□□ -0.49
ARHGAP28-211ENST00000579796 SYNJ2O15056 1496 aa12□□□□□ -0.49
ARHGAP28-211ENST00000579796 SEC24BO95487 1268 aa12□□□□□ -0.49
ARHGAP28-211ENST00000579796 ATP2B4P23634 1241 aa12□□□□□ -0.49
ARHGAP28-211ENST00000579796 PTK7Q13308 1070 aa12□□□□□ -0.49
ARHGAP28-211ENST00000579796 SLC39A7Q92504 469 aa12□□□□□ -0.49
ARHGAP28-211ENST00000579796 MTMR2Q13614 643 aa11.99□□□□□ -0.49
ARHGAP28-211ENST00000579796 ANKRD62A6NC57 917 aa11.99□□□□□ -0.49
ARHGAP28-211ENST00000579796 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
ARHGAP28-211ENST00000579796 FAM174AQ8TBP5 190 aa11.99□□□□□ -0.49
ARHGAP28-211ENST00000579796 USP17L5A8MUK1 530 aa11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 ANKRD13AQ8IZ07 590 aa11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 ADAM33Q9BZ11 813 aa11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 TMEM134Q9H6X4 195 aa11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 FHAD1B1AJZ9 1412 aa11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 GRIN2AQ12879 1464 aa11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 SF3A1Q15459 793 aaKnown RBP11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 C9orf131Q5VYM1 1079 aa11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 DPH6Q7L8W6 267 aa11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 FAM9AQ8IZU1 332 aaPredicted RBP11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 RDH13Q8NBN7 331 aa11.98□□□□□ -0.49
ARHGAP28-211ENST00000579796 PER1O15534 1290 aaPredicted RBP11.97□□□□□ -0.49
ARHGAP28-211ENST00000579796 MKRN1Q9UHC7 482 aaKnown RBP11.97□□□□□ -0.49
ARHGAP28-211ENST00000579796 SKIP12755 728 aa11.96□□□□□ -0.49
ARHGAP28-211ENST00000579796 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
ARHGAP28-211ENST00000579796 SLF2Q8IX21 1173 aa11.96□□□□□ -0.49
ARHGAP28-211ENST00000579796 HIRIP3Q9BW71 556 aaPredicted RBP11.96□□□□□ -0.49
ARHGAP28-211ENST00000579796 BACH2Q9BYV9 841 aa11.96□□□□□ -0.49
ARHGAP28-211ENST00000579796 POTEIP0CG38 1075 aa11.96□□□□□ -0.5
ARHGAP28-211ENST00000579796 NUDT18Q6ZVK8 323 aa11.96□□□□□ -0.5
ARHGAP28-211ENST00000579796 ZC3H4Q9UPT8 1303 aaKnown RBP11.95□□□□□ -0.5
ARHGAP28-211ENST00000579796 ERCC5P28715 1186 aaPredicted RBP11.95□□□□□ -0.5
ARHGAP28-211ENST00000579796 ZDHHC16Q969W1 377 aa11.95□□□□□ -0.5
ARHGAP28-211ENST00000579796 TSKSQ9UJT2 592 aa11.95□□□□□ -0.5
ARHGAP28-211ENST00000579796 PPP1R3GB7ZBB8 358 aa11.94□□□□□ -0.5
ARHGAP28-211ENST00000579796 FBXO45P0C2W1 286 aa11.94□□□□□ -0.5
ARHGAP28-211ENST00000579796 DNAJB2P25686 324 aa11.94□□□□□ -0.5
ARHGAP28-211ENST00000579796 PLEKHM2Q8IWE5 1019 aa11.94□□□□□ -0.5
ARHGAP28-211ENST00000579796 FAM200AQ8TCP9 573 aa11.94□□□□□ -0.5
ARHGAP28-211ENST00000579796 ANO2Q9NQ90 1003 aa11.94□□□□□ -0.5
ARHGAP28-211ENST00000579796 PCDHGA4Q9Y5G9 962 aa11.94□□□□□ -0.5
ARHGAP28-211ENST00000579796 CARMIL1Q5VZK9 1371 aa11.94□□□□□ -0.5
ARHGAP28-211ENST00000579796 NCLP19338 710 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms