RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 PLCH1Q4KWH8 1693 aa19.7■□□□□ 0.74
GGA3-208ENST00000579743 CENPJQ9HC77 1338 aaPredicted RBP19.7■□□□□ 0.74
GGA3-208ENST00000579743 ATP7BP35670 1465 aa19.69■□□□□ 0.74
GGA3-208ENST00000579743 ABCA3Q99758 1704 aa19.69■□□□□ 0.74
GGA3-208ENST00000579743 NBPF1Q3BBV0 1214 aa19.69■□□□□ 0.74
GGA3-208ENST00000579743 GLI3P10071 1580 aa19.69■□□□□ 0.74
GGA3-208ENST00000579743 ALS2Q96Q42 1657 aa19.68■□□□□ 0.74
GGA3-208ENST00000579743 ONECUT3O60422 494 aaPredicted RBP19.68■□□□□ 0.74
GGA3-208ENST00000579743 PLEKHG3A1L390 1219 aa19.67■□□□□ 0.74
GGA3-208ENST00000579743 NBPF8Q3BBV2 869 aa19.67■□□□□ 0.74
GGA3-208ENST00000579743 KRT27Q7Z3Y8 459 aa19.67■□□□□ 0.74
GGA3-208ENST00000579743 ACEP12821 1306 aa19.67■□□□□ 0.74
GGA3-208ENST00000579743 COL14A1Q05707 1796 aaKnown RBP19.67■□□□□ 0.74
GGA3-208ENST00000579743 L3MBTL2Q969R5 705 aa19.66■□□□□ 0.74
GGA3-208ENST00000579743 POLR3AO14802 1390 aaPredicted RBP19.66■□□□□ 0.74
GGA3-208ENST00000579743 BLMP54132 1417 aaPredicted RBP19.66■□□□□ 0.74
GGA3-208ENST00000579743 NEUROD1Q13562 356 aa19.64■□□□□ 0.73
GGA3-208ENST00000579743 ABTB2Q8N961 1025 aa19.64■□□□□ 0.73
GGA3-208ENST00000579743 FAM98CQ17RN3 349 aaKnown RBP19.63■□□□□ 0.73
GGA3-208ENST00000579743 BRD4O60885 1362 aaPredicted RBP19.62■□□□□ 0.73
GGA3-208ENST00000579743 NLRP13Q86W25 1043 aa19.62■□□□□ 0.73
GGA3-208ENST00000579743 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
GGA3-208ENST00000579743 EVA1CP58658 441 aa19.61■□□□□ 0.73
GGA3-208ENST00000579743 NUTM2GQ5VZR2 741 aa19.61■□□□□ 0.73
GGA3-208ENST00000579743 PPIP5K1Q6PFW1 1433 aa19.6■□□□□ 0.73
GGA3-208ENST00000579743 KIAA0232Q92628 1395 aa19.6■□□□□ 0.73
GGA3-208ENST00000579743 SPATA31A5Q5VU36 1347 aa19.6■□□□□ 0.73
GGA3-208ENST00000579743 SPATA31A7Q8IWB4 1347 aa19.6■□□□□ 0.73
GGA3-208ENST00000579743 ZC3H6P61129 1189 aaKnown RBP19.6■□□□□ 0.73
GGA3-208ENST00000579743 SIN3AQ96ST3 1273 aa19.6■□□□□ 0.73
GGA3-208ENST00000579743 CABP2Q9NPB3 220 aa19.6■□□□□ 0.73
GGA3-208ENST00000579743 ROCK2O75116 1388 aaKnown RBP19.59■□□□□ 0.73
GGA3-208ENST00000579743 TOPAZ1Q8N9V7 1692 aa19.59■□□□□ 0.73
GGA3-208ENST00000579743 BRWD3Q6RI45 1802 aa19.58■□□□□ 0.73
GGA3-208ENST00000579743 STRN4Q9NRL3 753 aa19.58■□□□□ 0.72
GGA3-208ENST00000579743 NRAPQ86VF7 1730 aa19.57■□□□□ 0.72
GGA3-208ENST00000579743 BAG6P46379 1132 aa19.57■□□□□ 0.72
GGA3-208ENST00000579743 CHRNA2Q15822 529 aa19.57■□□□□ 0.72
GGA3-208ENST00000579743 QRICH2Q9H0J4 1663 aa19.56■□□□□ 0.72
GGA3-208ENST00000579743 CABP1Q9NZU7 370 aa19.55■□□□□ 0.72
GGA3-208ENST00000579743 CRYBG1Q9Y4K1 1723 aa19.55■□□□□ 0.72
GGA3-208ENST00000579743 ZNF692Q9BU19 519 aaPredicted RBP19.54■□□□□ 0.72
GGA3-208ENST00000579743 SPATA31A1Q5TZJ5 1347 aa19.53■□□□□ 0.72
GGA3-208ENST00000579743 GCP02774 474 aa19.53■□□□□ 0.72
GGA3-208ENST00000579743 NLRP6P59044 892 aa19.53■□□□□ 0.72
GGA3-208ENST00000579743 PHRF1Q9P1Y6 1649 aaKnown RBP19.53■□□□□ 0.72
GGA3-208ENST00000579743 DEFB132Q7Z7B7 95 aa19.52■□□□□ 0.72
GGA3-208ENST00000579743 CPDO75976 1380 aa19.52■□□□□ 0.72
GGA3-208ENST00000579743 USP19O94966 1318 aa19.51■□□□□ 0.71
GGA3-208ENST00000579743 TRPM1Q7Z4N2 1603 aa19.51■□□□□ 0.71
GGA3-208ENST00000579743 USP35Q9P2H5 1018 aa19.51■□□□□ 0.71
GGA3-208ENST00000579743 PDE3BQ13370 1112 aa19.5■□□□□ 0.71
GGA3-208ENST00000579743 USP6P35125 1406 aa19.5■□□□□ 0.71
GGA3-208ENST00000579743 TONSLQ96HA7 1378 aa19.49■□□□□ 0.71
GGA3-208ENST00000579743 FAM196AQ6ZSG2 479 aa19.49■□□□□ 0.71
GGA3-208ENST00000579743 BARGINQ6ZT62 677 aa19.49■□□□□ 0.71
GGA3-208ENST00000579743 THRAP3Q9Y2W1 955 aaKnown RBP19.49■□□□□ 0.71
GGA3-208ENST00000579743 SSH2Q76I76 1423 aa19.49■□□□□ 0.71
GGA3-208ENST00000579743 ZBTB7CA1YPR0 619 aa19.48■□□□□ 0.71
GGA3-208ENST00000579743 TCP11L2Q8N4U5 519 aa19.48■□□□□ 0.71
GGA3-208ENST00000579743 CARD11Q9BXL7 1154 aa19.48■□□□□ 0.71
GGA3-208ENST00000579743 NRKQ7Z2Y5 1582 aa19.47■□□□□ 0.71
GGA3-208ENST00000579743 C11orf95C9JLR9 678 aaPredicted RBP19.46■□□□□ 0.71
GGA3-208ENST00000579743 KCNH5Q8NCM2 988 aa19.46■□□□□ 0.71
GGA3-208ENST00000579743 LARP1Q6PKG0 1096 aaKnown RBP19.45■□□□□ 0.7
GGA3-208ENST00000579743 THSD7AQ9UPZ6 1657 aa19.45■□□□□ 0.7
GGA3-208ENST00000579743 TTC21AQ8NDW8 1320 aa19.45■□□□□ 0.7
GGA3-208ENST00000579743 FAM182BQ5T319 152 aa19.44■□□□□ 0.7
GGA3-208ENST00000579743 RGPD1P0DJD0 1748 aa19.43■□□□□ 0.7
GGA3-208ENST00000579743 AATKQ6ZMQ8 1374 aa19.43■□□□□ 0.7
GGA3-208ENST00000579743 CAMTA1Q9Y6Y1 1673 aa19.43■□□□□ 0.7
GGA3-208ENST00000579743 EP400Q96L91 3159 aa19.42■□□□□ 0.7
GGA3-208ENST00000579743 SLC24A1O60721 1099 aa19.42■□□□□ 0.7
GGA3-208ENST00000579743 TTC21BQ7Z4L5 1316 aa19.42■□□□□ 0.7
GGA3-208ENST00000579743 EN1Q05925 392 aaPredicted RBP19.41■□□□□ 0.7
GGA3-208ENST00000579743 KTN1Q86UP2 1357 aaKnown RBP19.41■□□□□ 0.7
GGA3-208ENST00000579743 SBNO2Q9Y2G9 1366 aa19.41■□□□□ 0.7
GGA3-208ENST00000579743 TRIM37O94972 964 aa19.4■□□□□ 0.7
GGA3-208ENST00000579743 TOM1L2Q6ZVM7 507 aa19.4■□□□□ 0.7
GGA3-208ENST00000579743 CRB1P82279 1406 aa19.4■□□□□ 0.7
GGA3-208ENST00000579743 TRIM26Q12899 539 aaPredicted RBP19.39■□□□□ 0.69
GGA3-208ENST00000579743 HDGFL2Q7Z4V5 671 aaPredicted RBP19.39■□□□□ 0.69
GGA3-208ENST00000579743 COL5A2P05997 1499 aaPredicted RBP19.39■□□□□ 0.69
GGA3-208ENST00000579743 LMO7Q8WWI1 1683 aa19.39■□□□□ 0.69
GGA3-208ENST00000579743 SLIT3O75094 1523 aa19.38■□□□□ 0.69
GGA3-208ENST00000579743 APBA3O96018 575 aa19.38■□□□□ 0.69
GGA3-208ENST00000579743 TMC1Q8TDI8 760 aa19.38■□□□□ 0.69
GGA3-208ENST00000579743 DISP2A7MBM2 1401 aa19.37■□□□□ 0.69
GGA3-208ENST00000579743 CSB-PGBD3P0DP91 1061 aa19.37■□□□□ 0.69
GGA3-208ENST00000579743 CDCA7Q9BWT1 371 aaPredicted RBP19.37■□□□□ 0.69
GGA3-208ENST00000579743 PARD3Q8TEW0 1356 aa19.36■□□□□ 0.69
GGA3-208ENST00000579743 SOX12O15370 315 aa19.36■□□□□ 0.69
GGA3-208ENST00000579743 TERF2IPQ9NYB0 399 aa19.36■□□□□ 0.69
GGA3-208ENST00000579743 CPSF1Q10570 1443 aaKnown RBP19.35■□□□□ 0.69
GGA3-208ENST00000579743 PIK3C2AO00443 1686 aa19.34■□□□□ 0.69
GGA3-208ENST00000579743 WDR17Q8IZU2 1322 aa19.34■□□□□ 0.69
GGA3-208ENST00000579743 DDB1Q16531 1140 aa19.34■□□□□ 0.69
GGA3-208ENST00000579743 ARHGEF25Q86VW2 580 aa19.34■□□□□ 0.69
GGA3-208ENST00000579743 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.34■□□□□ 0.69
GGA3-208ENST00000579743 PUS7Q96PZ0 661 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms