RNA–Protein interactions for RNA: ENST00000579688.1

SPECC1-213, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-213ENST00000579688 ATP7BP35670 1465 aa28.5■■■□□ 2.15
SPECC1-213ENST00000579688 KIAA1210Q9ULL0 1709 aa28.49■■■□□ 2.15
SPECC1-213ENST00000579688 NGDNQ8NEJ9 315 aaKnown RBP28.48■■■□□ 2.15
SPECC1-213ENST00000579688 BTG4Q9NY30 223 aa28.47■■■□□ 2.15
SPECC1-213ENST00000579688 TOPAZ1Q8N9V7 1692 aa28.45■■■□□ 2.15
SPECC1-213ENST00000579688 KRT27Q7Z3Y8 459 aa28.45■■■□□ 2.14
SPECC1-213ENST00000579688 PAK3O75914 559 aaPredicted RBP28.44■■■□□ 2.14
SPECC1-213ENST00000579688 PHRF1Q9P1Y6 1649 aaKnown RBP28.43■■■□□ 2.14
SPECC1-213ENST00000579688 DEFB132Q7Z7B7 95 aa28.43■■■□□ 2.14
SPECC1-213ENST00000579688 NUDT16Q96DE0 195 aaKnown RBP28.43■■■□□ 2.14
SPECC1-213ENST00000579688 A0A0G2JS52 829 aa28.41■■■□□ 2.14
SPECC1-213ENST00000579688 MYT1Q01538 1121 aa28.41■■■□□ 2.14
SPECC1-213ENST00000579688 SF3B2Q13435 895 aaKnown RBP28.41■■■□□ 2.14
SPECC1-213ENST00000579688 FAM98CQ17RN3 349 aaKnown RBP28.41■■■□□ 2.14
SPECC1-213ENST00000579688 THSD7AQ9UPZ6 1657 aa28.38■■■□□ 2.13
SPECC1-213ENST00000579688 CDK19Q9BWU1 502 aa28.37■■■□□ 2.13
SPECC1-213ENST00000579688 SPATA31A5Q5VU36 1347 aa28.37■■■□□ 2.13
SPECC1-213ENST00000579688 SPATA31A7Q8IWB4 1347 aa28.37■■■□□ 2.13
SPECC1-213ENST00000579688 PRDM11Q9NQV5 511 aa28.36■■■□□ 2.13
SPECC1-213ENST00000579688 POLR3AO14802 1390 aaPredicted RBP28.35■■■□□ 2.13
SPECC1-213ENST00000579688 RGPD1P0DJD0 1748 aa28.35■■■□□ 2.13
SPECC1-213ENST00000579688 KIAA0232Q92628 1395 aa28.34■■■□□ 2.13
SPECC1-213ENST00000579688 CCDC61Q9Y6R9 512 aa28.31■■■□□ 2.12
SPECC1-213ENST00000579688 ACEP12821 1306 aa28.31■■■□□ 2.12
SPECC1-213ENST00000579688 NRKQ7Z2Y5 1582 aa28.29■■■□□ 2.12
SPECC1-213ENST00000579688 NBPF1Q3BBV0 1214 aa28.29■■■□□ 2.12
SPECC1-213ENST00000579688 CHRNA2Q15822 529 aa28.28■■■□□ 2.12
SPECC1-213ENST00000579688 NBPF8Q3BBV2 869 aa28.28■■■□□ 2.12
SPECC1-213ENST00000579688 NUTM2GQ5VZR2 741 aa28.28■■■□□ 2.12
SPECC1-213ENST00000579688 TNS1Q9HBL0 1735 aaKnown RBP28.28■■■□□ 2.12
SPECC1-213ENST00000579688 QRICH2Q9H0J4 1663 aa28.27■■■□□ 2.12
SPECC1-213ENST00000579688 PLEKHG3A1L390 1219 aa28.27■■■□□ 2.12
SPECC1-213ENST00000579688 BAG6P46379 1132 aa28.27■■■□□ 2.12
SPECC1-213ENST00000579688 SPATA31A1Q5TZJ5 1347 aa28.26■■■□□ 2.11
SPECC1-213ENST00000579688 ZC3H6P61129 1189 aaKnown RBP28.25■■■□□ 2.11
SPECC1-213ENST00000579688 FAM182BQ5T319 152 aa28.25■■■□□ 2.11
SPECC1-213ENST00000579688 LRP5O75197 1615 aa28.24■■■□□ 2.11
SPECC1-213ENST00000579688 STRN4Q9NRL3 753 aa28.23■■■□□ 2.11
SPECC1-213ENST00000579688 LMO7Q8WWI1 1683 aa28.23■■■□□ 2.11
SPECC1-213ENST00000579688 PPIP5K1Q6PFW1 1433 aa28.22■■■□□ 2.11
SPECC1-213ENST00000579688 CENPJQ9HC77 1338 aaPredicted RBP28.21■■■□□ 2.11
SPECC1-213ENST00000579688 SSH2Q76I76 1423 aa28.2■■■□□ 2.11
SPECC1-213ENST00000579688 SRPK2P78362 688 aaKnown RBP28.2■■■□□ 2.1
SPECC1-213ENST00000579688 ABTB2Q8N961 1025 aa28.2■■■□□ 2.1
SPECC1-213ENST00000579688 CAMTA1Q9Y6Y1 1673 aa28.19■■■□□ 2.1
SPECC1-213ENST00000579688 USP19O94966 1318 aa28.19■■■□□ 2.1
SPECC1-213ENST00000579688 DISP2A7MBM2 1401 aa28.19■■■□□ 2.1
SPECC1-213ENST00000579688 EN1Q05925 392 aaPredicted RBP28.18■■■□□ 2.1
SPECC1-213ENST00000579688 CPDO75976 1380 aa28.18■■■□□ 2.1
SPECC1-213ENST00000579688 CABP2Q9NPB3 220 aa28.16■■■□□ 2.1
SPECC1-213ENST00000579688 TRPM1Q7Z4N2 1603 aa28.15■■■□□ 2.1
SPECC1-213ENST00000579688 PSDA5PKW4 1024 aaPredicted RBP28.15■■■□□ 2.1
SPECC1-213ENST00000579688 EVA1CP58658 441 aa28.14■■■□□ 2.1
SPECC1-213ENST00000579688 USP35Q9P2H5 1018 aa28.14■■■□□ 2.1
SPECC1-213ENST00000579688 BRD4O60885 1362 aaPredicted RBP28.12■■■□□ 2.09
SPECC1-213ENST00000579688 BARGINQ6ZT62 677 aa28.12■■■□□ 2.09
SPECC1-213ENST00000579688 NLRP13Q86W25 1043 aa28.12■■■□□ 2.09
SPECC1-213ENST00000579688 GCP02774 474 aa28.11■■■□□ 2.09
SPECC1-213ENST00000579688 LARP1Q6PKG0 1096 aaKnown RBP28.11■■■□□ 2.09
SPECC1-213ENST00000579688 FAM196AQ6ZSG2 479 aa28.11■■■□□ 2.09
SPECC1-213ENST00000579688 L3MBTL2Q969R5 705 aa28.11■■■□□ 2.09
SPECC1-213ENST00000579688 USP6P35125 1406 aa28.1■■■□□ 2.09
SPECC1-213ENST00000579688 TRIM37O94972 964 aa28.09■■■□□ 2.09
SPECC1-213ENST00000579688 PARP4Q9UKK3 1724 aaKnown RBP28.09■■■□□ 2.09
SPECC1-213ENST00000579688 COL5A2P05997 1499 aaPredicted RBP28.08■■■□□ 2.09
SPECC1-213ENST00000579688 PIK3C2AO00443 1686 aa28.08■■■□□ 2.09
SPECC1-213ENST00000579688 TCP11L2Q8N4U5 519 aa28.07■■■□□ 2.08
SPECC1-213ENST00000579688 CABP1Q9NZU7 370 aa28.07■■■□□ 2.08
SPECC1-213ENST00000579688 SLIT3O75094 1523 aa28.07■■■□□ 2.08
SPECC1-213ENST00000579688 EZH2Q15910 746 aaKnown RBP28.06■■■□□ 2.08
SPECC1-213ENST00000579688 PDE3BQ13370 1112 aa28.05■■■□□ 2.08
SPECC1-213ENST00000579688 RREB1Q92766 1687 aa28.05■■■□□ 2.08
SPECC1-213ENST00000579688 R3HDM1Q15032 1099 aaKnown RBP28.04■■■□□ 2.08
SPECC1-213ENST00000579688 THRAP3Q9Y2W1 955 aaKnown RBP28.04■■■□□ 2.08
SPECC1-213ENST00000579688 AKAP12Q02952 1782 aa28.04■■■□□ 2.08
SPECC1-213ENST00000579688 CAMKK2Q96RR4 588 aa28.03■■■□□ 2.08
SPECC1-213ENST00000579688 PARD3Q8TEW0 1356 aa28.02■■■□□ 2.08
SPECC1-213ENST00000579688 COL18A1P39060 1754 aa28.02■■■□□ 2.08
SPECC1-213ENST00000579688 EVC2Q86UK5 1308 aa28.02■■■□□ 2.08
SPECC1-213ENST00000579688 NLRP6P59044 892 aa28.02■■■□□ 2.08
SPECC1-213ENST00000579688 SIN3AQ96ST3 1273 aa28.02■■■□□ 2.08
SPECC1-213ENST00000579688 APBA3O96018 575 aa28.01■■■□□ 2.07
SPECC1-213ENST00000579688 NUP188Q5SRE5 1749 aa28.01■■■□□ 2.07
SPECC1-213ENST00000579688 CRB1P82279 1406 aa28.01■■■□□ 2.07
SPECC1-213ENST00000579688 ROCK2O75116 1388 aaKnown RBP27.99■■■□□ 2.07
SPECC1-213ENST00000579688 AATKQ6ZMQ8 1374 aa27.99■■■□□ 2.07
SPECC1-213ENST00000579688 WNK3Q9BYP7 1800 aa27.99■■■□□ 2.07
SPECC1-213ENST00000579688 ZBTB7CA1YPR0 619 aa27.98■■■□□ 2.07
SPECC1-213ENST00000579688 LRRC37A3O60309 1634 aa27.98■■■□□ 2.07
SPECC1-213ENST00000579688 PEAK1Q9H792 1746 aa27.97■■■□□ 2.07
SPECC1-213ENST00000579688 RGPD5Q99666 1765 aa27.96■■■□□ 2.07
SPECC1-213ENST00000579688 SBF2Q86WG5 1849 aa27.95■■■□□ 2.07
SPECC1-213ENST00000579688 NEUROD1Q13562 356 aa27.95■■■□□ 2.06
SPECC1-213ENST00000579688 CPSF1Q10570 1443 aaKnown RBP27.92■■■□□ 2.06
SPECC1-213ENST00000579688 MON2Q7Z3U7 1717 aa27.92■■■□□ 2.06
SPECC1-213ENST00000579688 TTC21BQ7Z4L5 1316 aa27.92■■■□□ 2.06
SPECC1-213ENST00000579688 ZNF692Q9BU19 519 aaPredicted RBP27.91■■■□□ 2.06
SPECC1-213ENST00000579688 OVOS2A0A0G2JMS6 1433 aa27.91■■■□□ 2.06
SPECC1-213ENST00000579688 OVOS2A0A0J9YW53 1432 aa27.91■■■□□ 2.06
SPECC1-213ENST00000579688 OVOS2Q6IE36 1432 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms