RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 R3HDM1Q15032 1099 aaKnown RBP13.07□□□□□ -0.32
BRIP1-204ENST00000579028 C14orf93Q9H972 538 aaKnown RBP13.07□□□□□ -0.32
BRIP1-204ENST00000579028 BTG4Q9NY30 223 aa13.07□□□□□ -0.32
BRIP1-204ENST00000579028 ALS2Q96Q42 1657 aa13.07□□□□□ -0.32
BRIP1-204ENST00000579028 SPATA31A5Q5VU36 1347 aa13.06□□□□□ -0.32
BRIP1-204ENST00000579028 SPATA31A7Q8IWB4 1347 aa13.06□□□□□ -0.32
BRIP1-204ENST00000579028 ADGRB2O60241 1585 aa13.06□□□□□ -0.32
BRIP1-204ENST00000579028 DHX57Q6P158 1386 aaKnown RBP13.06□□□□□ -0.32
BRIP1-204ENST00000579028 DLC1Q96QB1 1528 aa13.05□□□□□ -0.32
BRIP1-204ENST00000579028 CRYBG1Q9Y4K1 1723 aa13.05□□□□□ -0.32
BRIP1-204ENST00000579028 FAM182BQ5T319 152 aa13.04□□□□□ -0.32
BRIP1-204ENST00000579028 PMFBP1Q8TBY8 1022 aa13.04□□□□□ -0.32
BRIP1-204ENST00000579028 EZH2Q15910 746 aaKnown RBP13.03□□□□□ -0.32
BRIP1-204ENST00000579028 PRAM1Q96QH2 718 aa13.03□□□□□ -0.32
BRIP1-204ENST00000579028 SAFB2Q14151 953 aaKnown RBP eCLIP13.02□□□□□ -0.33
BRIP1-204ENST00000579028 CFAP70Q5T0N1 1121 aa13.02□□□□□ -0.33
BRIP1-204ENST00000579028 CAMKK2Q96RR4 588 aa13.02□□□□□ -0.33
BRIP1-204ENST00000579028 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.33
BRIP1-204ENST00000579028 MPHOSPH9Q99550 1183 aa13.01□□□□□ -0.33
BRIP1-204ENST00000579028 ACIN1Q9UKV3 1341 aaKnown RBP13.01□□□□□ -0.33
BRIP1-204ENST00000579028 PARD3Q8TEW0 1356 aa13.01□□□□□ -0.33
BRIP1-204ENST00000579028 RREB1Q92766 1687 aa12.99□□□□□ -0.33
BRIP1-204ENST00000579028 TULP4Q9NRJ4 1543 aa12.99□□□□□ -0.33
BRIP1-204ENST00000579028 EIF3AQ14152 1382 aaKnown RBP12.99□□□□□ -0.33
BRIP1-204ENST00000579028 SPATA31A1Q5TZJ5 1347 aa12.99□□□□□ -0.33
BRIP1-204ENST00000579028 PRR36Q9H6K5 1346 aa12.99□□□□□ -0.33
BRIP1-204ENST00000579028 TRIM37O94972 964 aa12.99□□□□□ -0.33
BRIP1-204ENST00000579028 FAM196AQ6ZSG2 479 aa12.99□□□□□ -0.33
BRIP1-204ENST00000579028 POGKQ9P215 609 aa12.99□□□□□ -0.33
BRIP1-204ENST00000579028 YY1P25490 414 aa12.98□□□□□ -0.33
BRIP1-204ENST00000579028 PRDM11Q9NQV5 511 aa12.98□□□□□ -0.33
BRIP1-204ENST00000579028 ADGRB1O14514 1584 aa12.98□□□□□ -0.33
BRIP1-204ENST00000579028 NUP188Q5SRE5 1749 aa12.97□□□□□ -0.33
BRIP1-204ENST00000579028 APBA3O96018 575 aa12.96□□□□□ -0.33
BRIP1-204ENST00000579028 KIAA0232Q92628 1395 aa12.95□□□□□ -0.34
BRIP1-204ENST00000579028 PHRF1Q9P1Y6 1649 aaKnown RBP12.95□□□□□ -0.34
BRIP1-204ENST00000579028 HIRIP3Q9BW71 556 aaPredicted RBP12.95□□□□□ -0.34
BRIP1-204ENST00000579028 WASLO00401 505 aaPredicted RBP12.94□□□□□ -0.34
BRIP1-204ENST00000579028 BARGINQ6ZT62 677 aa12.94□□□□□ -0.34
BRIP1-204ENST00000579028 NGDNQ8NEJ9 315 aaKnown RBP12.94□□□□□ -0.34
BRIP1-204ENST00000579028 MINK1Q8N4C8 1332 aaPredicted RBP12.93□□□□□ -0.34
BRIP1-204ENST00000579028 PAK3O75914 559 aaPredicted RBP12.93□□□□□ -0.34
BRIP1-204ENST00000579028 KCNA4P22459 653 aa12.93□□□□□ -0.34
BRIP1-204ENST00000579028 STRN4Q9NRL3 753 aa12.93□□□□□ -0.34
BRIP1-204ENST00000579028 TRAK1Q9UPV9 953 aa12.93□□□□□ -0.34
BRIP1-204ENST00000579028 ITSN1Q15811 1721 aa12.93□□□□□ -0.34
BRIP1-204ENST00000579028 ATP7BP35670 1465 aa12.92□□□□□ -0.34
BRIP1-204ENST00000579028 CHRNA2Q15822 529 aa12.92□□□□□ -0.34
BRIP1-204ENST00000579028 NBPF8Q3BBV2 869 aa12.92□□□□□ -0.34
BRIP1-204ENST00000579028 NBPF14Q5TI25 921 aa12.92□□□□□ -0.34
BRIP1-204ENST00000579028 SSH2Q76I76 1423 aa12.92□□□□□ -0.34
BRIP1-204ENST00000579028 NINLQ9Y2I6 1382 aa12.92□□□□□ -0.34
BRIP1-204ENST00000579028 PDE3BQ13370 1112 aa12.91□□□□□ -0.34
BRIP1-204ENST00000579028 SPON1Q9HCB6 807 aa12.91□□□□□ -0.34
BRIP1-204ENST00000579028 KCNQ2O43526 872 aa12.9□□□□□ -0.34
BRIP1-204ENST00000579028 C1QBPQ07021 282 aaKnown RBP12.9□□□□□ -0.34
BRIP1-204ENST00000579028 LMO7Q8WWI1 1683 aa12.89□□□□□ -0.35
BRIP1-204ENST00000579028 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
BRIP1-204ENST00000579028 ZC3H6P61129 1189 aaKnown RBP12.89□□□□□ -0.35
BRIP1-204ENST00000579028 USP35Q9P2H5 1018 aa12.89□□□□□ -0.35
BRIP1-204ENST00000579028 PPP1R1BQ9UD71 204 aaPredicted RBP12.89□□□□□ -0.35
BRIP1-204ENST00000579028 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
BRIP1-204ENST00000579028 EVA1CP58658 441 aa12.88□□□□□ -0.35
BRIP1-204ENST00000579028 TCP11L2Q8N4U5 519 aa12.88□□□□□ -0.35
BRIP1-204ENST00000579028 ARHGEF28Q8N1W1 1705 aaKnown RBP12.88□□□□□ -0.35
BRIP1-204ENST00000579028 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
BRIP1-204ENST00000579028 RGPD3A6NKT7 1758 aaPredicted RBP12.87□□□□□ -0.35
BRIP1-204ENST00000579028 RGPD4Q7Z3J3 1758 aa12.87□□□□□ -0.35
BRIP1-204ENST00000579028 POLR3AO14802 1390 aaPredicted RBP12.87□□□□□ -0.35
BRIP1-204ENST00000579028 CPDO75976 1380 aa12.87□□□□□ -0.35
BRIP1-204ENST00000579028 C11orf95C9JLR9 678 aaPredicted RBP12.87□□□□□ -0.35
BRIP1-204ENST00000579028 LARP1Q6PKG0 1096 aaKnown RBP12.87□□□□□ -0.35
BRIP1-204ENST00000579028 NUDT16Q96DE0 195 aaKnown RBP12.87□□□□□ -0.35
BRIP1-204ENST00000579028 THRAP3Q9Y2W1 955 aaKnown RBP12.87□□□□□ -0.35
BRIP1-204ENST00000579028 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
BRIP1-204ENST00000579028 USP19O94966 1318 aa12.86□□□□□ -0.35
BRIP1-204ENST00000579028 PEAK1Q9H792 1746 aa12.85□□□□□ -0.35
BRIP1-204ENST00000579028 CASZ1Q86V15 1759 aa12.85□□□□□ -0.35
BRIP1-204ENST00000579028 NUTM2GQ5VZR2 741 aa12.85□□□□□ -0.35
BRIP1-204ENST00000579028 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
BRIP1-204ENST00000579028 SBF2Q86WG5 1849 aa12.83□□□□□ -0.35
BRIP1-204ENST00000579028 OVOS2A0A0G2JMS6 1433 aa12.83□□□□□ -0.36
BRIP1-204ENST00000579028 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
BRIP1-204ENST00000579028 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
BRIP1-204ENST00000579028 PLSCR1O15162 318 aa12.83□□□□□ -0.36
BRIP1-204ENST00000579028 COL5A2P05997 1499 aaPredicted RBP12.83□□□□□ -0.36
BRIP1-204ENST00000579028 ACEP12821 1306 aa12.83□□□□□ -0.36
BRIP1-204ENST00000579028 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
BRIP1-204ENST00000579028 CDK19Q9BWU1 502 aa12.82□□□□□ -0.36
BRIP1-204ENST00000579028 KDM2AQ9Y2K7 1162 aa12.82□□□□□ -0.36
BRIP1-204ENST00000579028 CCDC61Q9Y6R9 512 aa12.82□□□□□ -0.36
BRIP1-204ENST00000579028 LRRC37A3O60309 1634 aa12.81□□□□□ -0.36
BRIP1-204ENST00000579028 CRB1P82279 1406 aa12.81□□□□□ -0.36
BRIP1-204ENST00000579028 ABTB2Q8N961 1025 aa12.81□□□□□ -0.36
BRIP1-204ENST00000579028 DCAF11Q8TEB1 546 aa12.81□□□□□ -0.36
BRIP1-204ENST00000579028 ANO8Q9HCE9 1232 aaPredicted RBP12.81□□□□□ -0.36
BRIP1-204ENST00000579028 GCP02774 474 aa12.8□□□□□ -0.36
BRIP1-204ENST00000579028 NLRP13Q86W25 1043 aa12.8□□□□□ -0.36
BRIP1-204ENST00000579028 MYOM1P52179 1685 aa12.79□□□□□ -0.36
BRIP1-204ENST00000579028 ZNF784Q8NCA9 323 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms