RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 TBX22Q9Y458 520 aa7.26□□□□□ -1.25
GAPLINC-202ENST00000579007 FMN2Q9NZ56 1722 aa7.26□□□□□ -1.25
GAPLINC-202ENST00000579007 RGPD8O14715 1765 aaPredicted RBP7.25□□□□□ -1.25
GAPLINC-202ENST00000579007 ITGAEP38570 1179 aa7.25□□□□□ -1.25
GAPLINC-202ENST00000579007 TRAK2O60296 914 aa7.24□□□□□ -1.25
GAPLINC-202ENST00000579007 SRCAPQ6ZRS2 3230 aa7.23□□□□□ -1.25
GAPLINC-202ENST00000579007 PDE4DQ08499 809 aa7.23□□□□□ -1.25
GAPLINC-202ENST00000579007 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.23□□□□□ -1.25
GAPLINC-202ENST00000579007 SLAIN2Q9P270 581 aa7.23□□□□□ -1.25
GAPLINC-202ENST00000579007 SETD5Q9C0A6 1442 aa7.23□□□□□ -1.25
GAPLINC-202ENST00000579007 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.23□□□□□ -1.25
GAPLINC-202ENST00000579007 TRIM66O15016 1216 aa7.22□□□□□ -1.25
GAPLINC-202ENST00000579007 TMCO4Q5TGY1 634 aa7.22□□□□□ -1.25
GAPLINC-202ENST00000579007 BRINP3Q76B58 766 aa7.22□□□□□ -1.25
GAPLINC-202ENST00000579007 KRI1Q8N9T8 703 aaKnown RBP7.22□□□□□ -1.25
GAPLINC-202ENST00000579007 FAM212AQ96EL1 285 aa7.22□□□□□ -1.25
GAPLINC-202ENST00000579007 SPINK5Q9NQ38 1064 aaPredicted RBP7.22□□□□□ -1.25
GAPLINC-202ENST00000579007 C1orf167Q5SNV9 1468 aa7.22□□□□□ -1.25
GAPLINC-202ENST00000579007 KIF1AQ12756 1690 aa7.22□□□□□ -1.25
GAPLINC-202ENST00000579007 ROBO2Q9HCK4 1378 aa7.21□□□□□ -1.25
GAPLINC-202ENST00000579007 RGS12O14924 1447 aa7.21□□□□□ -1.25
GAPLINC-202ENST00000579007 AMOTL2Q9Y2J4 779 aa7.21□□□□□ -1.26
GAPLINC-202ENST00000579007 PLCH1Q4KWH8 1693 aa7.21□□□□□ -1.26
GAPLINC-202ENST00000579007 PNPLA6Q8IY17 1366 aa7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 USP32Q8NFA0 1604 aa7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 SPATA31E1Q6ZUB1 1445 aa7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 PXDNQ92626 1479 aa7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 CDK12Q9NYV4 1490 aaPredicted RBP7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 ZNF316A6NFI3 1004 aaPredicted RBP7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 HSP90B1P14625 803 aaKnown RBP7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 MTMR7Q9Y216 660 aa7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 CRYBG1Q9Y4K1 1723 aa7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 SPATA31A6Q5VVP1 1343 aa7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 BRWD3Q6RI45 1802 aa7.2□□□□□ -1.26
GAPLINC-202ENST00000579007 TECPR2O15040 1411 aa7.19□□□□□ -1.26
GAPLINC-202ENST00000579007 MYOM2P54296 1465 aa7.19□□□□□ -1.26
GAPLINC-202ENST00000579007 ONECUT3O60422 494 aaPredicted RBP7.19□□□□□ -1.26
GAPLINC-202ENST00000579007 C1QBPQ07021 282 aaKnown RBP7.19□□□□□ -1.26
GAPLINC-202ENST00000579007 DDRGK1Q96HY6 314 aa7.19□□□□□ -1.26
GAPLINC-202ENST00000579007 C19orf44Q9H6X5 657 aa7.19□□□□□ -1.26
GAPLINC-202ENST00000579007 ARIH1Q9Y4X5 557 aaPredicted RBP7.19□□□□□ -1.26
GAPLINC-202ENST00000579007 ADGRB2O60241 1585 aa7.19□□□□□ -1.26
GAPLINC-202ENST00000579007 PIK3C2GO75747 1445 aa7.18□□□□□ -1.26
GAPLINC-202ENST00000579007 TRPM3Q9HCF6 1732 aaPredicted RBP7.18□□□□□ -1.26
GAPLINC-202ENST00000579007 EIF5BO60841 1220 aaKnown RBP7.18□□□□□ -1.26
GAPLINC-202ENST00000579007 HDGFP51858 240 aaKnown RBP7.18□□□□□ -1.26
GAPLINC-202ENST00000579007 MFAP1P55081 439 aaKnown RBP7.18□□□□□ -1.26
GAPLINC-202ENST00000579007 ZNF326Q5BKZ1 582 aaKnown RBP7.18□□□□□ -1.26
GAPLINC-202ENST00000579007 AEBP1Q8IUX7 1158 aa7.18□□□□□ -1.26
GAPLINC-202ENST00000579007 DDX17Q92841 729 aaKnown RBP7.18□□□□□ -1.26
GAPLINC-202ENST00000579007 NRAPQ86VF7 1730 aa7.18□□□□□ -1.26
GAPLINC-202ENST00000579007 ARHGEF28Q8N1W1 1705 aaKnown RBP7.18□□□□□ -1.26
GAPLINC-202ENST00000579007 NRXN1Q9ULB1 1477 aa7.17□□□□□ -1.26
GAPLINC-202ENST00000579007 ATF3P18847 181 aa7.17□□□□□ -1.26
GAPLINC-202ENST00000579007 CDK11BP21127 795 aaKnown RBP7.17□□□□□ -1.26
GAPLINC-202ENST00000579007 GPIHBP1Q8IV16 184 aa7.17□□□□□ -1.26
GAPLINC-202ENST00000579007 FAM117AQ9C073 453 aa7.17□□□□□ -1.26
GAPLINC-202ENST00000579007 SERPINA10Q9UK55 444 aa7.17□□□□□ -1.26
GAPLINC-202ENST00000579007 ALS2Q96Q42 1657 aa7.16□□□□□ -1.26
GAPLINC-202ENST00000579007 GOPCQ9HD26 462 aa7.16□□□□□ -1.26
GAPLINC-202ENST00000579007 CCDC144AA2RUR9 1427 aa7.16□□□□□ -1.26
GAPLINC-202ENST00000579007 ADGRB1O14514 1584 aa7.16□□□□□ -1.26
GAPLINC-202ENST00000579007 GLI3P10071 1580 aa7.16□□□□□ -1.26
GAPLINC-202ENST00000579007 NWD2Q9ULI1 1742 aa7.15□□□□□ -1.26
GAPLINC-202ENST00000579007 CAPN15O75808 1086 aa7.15□□□□□ -1.26
GAPLINC-202ENST00000579007 PUS7Q96PZ0 661 aaKnown RBP7.15□□□□□ -1.26
GAPLINC-202ENST00000579007 AFF2P51816 1311 aa7.15□□□□□ -1.26
GAPLINC-202ENST00000579007 PLEKHH1Q9ULM0 1364 aa7.15□□□□□ -1.26
GAPLINC-202ENST00000579007 TOPAZ1Q8N9V7 1692 aa7.15□□□□□ -1.27
GAPLINC-202ENST00000579007 ITSN1Q15811 1721 aa7.15□□□□□ -1.27
GAPLINC-202ENST00000579007 MEX3CQ5U5Q3 659 aaKnown RBP7.14□□□□□ -1.27
GAPLINC-202ENST00000579007 ADGRF5Q8IZF2 1346 aa7.14□□□□□ -1.27
GAPLINC-202ENST00000579007 CLUAP1Q96AJ1 413 aa7.14□□□□□ -1.27
GAPLINC-202ENST00000579007 PHRF1Q9P1Y6 1649 aaKnown RBP7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 DLC1Q96QB1 1528 aa7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 ATRNO75882 1429 aa7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 SOS2Q07890 1332 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 PLEKHG3A1L390 1219 aa7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 NUTM2BA6NNL0 878 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 NUTM2EB1AL46 878 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 E9PSI1 815 aa7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 RBM25P49756 843 aaKnown RBP7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 NUTM2AQ8IVF1 878 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 TRIM52Q96A61 297 aa7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 CCDC97Q96F63 343 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 GZF1Q9H116 711 aaPredicted RBP7.13□□□□□ -1.27
GAPLINC-202ENST00000579007 YTHDC2Q9H6S0 1430 aaKnown RBP7.12□□□□□ -1.27
GAPLINC-202ENST00000579007 LRPPRCP42704 1394 aaKnown RBP7.12□□□□□ -1.27
GAPLINC-202ENST00000579007 ZNF772Q68DY9 489 aaPredicted RBP7.12□□□□□ -1.27
GAPLINC-202ENST00000579007 ORAI2Q96SN7 254 aa7.12□□□□□ -1.27
GAPLINC-202ENST00000579007 RPGRIP1LQ68CZ1 1315 aa7.11□□□□□ -1.27
GAPLINC-202ENST00000579007 UPF1Q92900 1129 aaKnown RBP eCLIP7.11□□□□□ -1.27
GAPLINC-202ENST00000579007 C8orf37Q96NL8 207 aa7.11□□□□□ -1.27
GAPLINC-202ENST00000579007 BCL9LQ86UU0 1499 aa7.11□□□□□ -1.27
GAPLINC-202ENST00000579007 TNS1Q9HBL0 1735 aaKnown RBP7.1□□□□□ -1.27
GAPLINC-202ENST00000579007 KIAA1210Q9ULL0 1709 aa7.1□□□□□ -1.27
GAPLINC-202ENST00000579007 ANKRD30BQ9BXX2 1392 aa7.1□□□□□ -1.27
GAPLINC-202ENST00000579007 PATL2C9JE40 543 aaKnown RBP7.1□□□□□ -1.27
GAPLINC-202ENST00000579007 FOXD4L5Q5VV16 416 aaPredicted RBP7.1□□□□□ -1.27
GAPLINC-202ENST00000579007 FOXD4L4Q8WXT5 416 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms