RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TTC13Q8NBP0 860 aa6.2□□□□□ -1.42
SMARCE1-215ENST00000578995 KIF14Q15058 1648 aa6.2□□□□□ -1.42
SMARCE1-215ENST00000578995 TSPOAP1O95153 1857 aa6.19□□□□□ -1.42
SMARCE1-215ENST00000578995 CDC42BPBQ9Y5S2 1711 aa6.19□□□□□ -1.42
SMARCE1-215ENST00000578995 TIAM1Q13009 1591 aa6.18□□□□□ -1.42
SMARCE1-215ENST00000578995 TTC37Q6PGP7 1564 aa6.18□□□□□ -1.42
SMARCE1-215ENST00000578995 ABCC10Q5T3U5 1492 aa6.18□□□□□ -1.42
SMARCE1-215ENST00000578995 P3H3Q8IVL6 736 aa6.18□□□□□ -1.42
SMARCE1-215ENST00000578995 EYA1Q99502 592 aa6.18□□□□□ -1.42
SMARCE1-215ENST00000578995 CDHR5Q9HBB8 845 aa6.18□□□□□ -1.42
SMARCE1-215ENST00000578995 MYO5CQ9NQX4 1742 aa6.18□□□□□ -1.42
SMARCE1-215ENST00000578995 ASXL2Q76L83 1435 aa6.17□□□□□ -1.42
SMARCE1-215ENST00000578995 VPS8Q8N3P4 1428 aa6.17□□□□□ -1.42
SMARCE1-215ENST00000578995 WDR7Q9Y4E6 1490 aa6.17□□□□□ -1.42
SMARCE1-215ENST00000578995 SMPD1P17405 629 aa6.17□□□□□ -1.42
SMARCE1-215ENST00000578995 PRIM1P49642 420 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-215ENST00000578995 PADI6Q6TGC4 694 aa6.17□□□□□ -1.42
SMARCE1-215ENST00000578995 SNIP1Q8TAD8 396 aaKnown RBP6.17□□□□□ -1.42
SMARCE1-215ENST00000578995 PREX2Q70Z35 1606 aa6.17□□□□□ -1.42
SMARCE1-215ENST00000578995 CCDC18Q5T9S5 1454 aa6.16□□□□□ -1.42
SMARCE1-215ENST00000578995 MAP3K1Q13233 1512 aa6.16□□□□□ -1.42
SMARCE1-215ENST00000578995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.16□□□□□ -1.42
SMARCE1-215ENST00000578995 CADPS2Q86UW7 1296 aa6.16□□□□□ -1.42
SMARCE1-215ENST00000578995 TMEM151AQ8N4L1 468 aa6.16□□□□□ -1.42
SMARCE1-215ENST00000578995 SPSB2Q99619 263 aa6.16□□□□□ -1.42
SMARCE1-215ENST00000578995 GRXCR2A6NFK2 248 aa6.15□□□□□ -1.42
SMARCE1-215ENST00000578995 H3BM21 787 aa6.15□□□□□ -1.42
SMARCE1-215ENST00000578995 CFHP08603 1231 aa6.15□□□□□ -1.42
SMARCE1-215ENST00000578995 RANGAP1P46060 587 aaPredicted RBP6.14□□□□□ -1.43
SMARCE1-215ENST00000578995 SCUBE3Q8IX30 993 aa6.14□□□□□ -1.43
SMARCE1-215ENST00000578995 EHBP1L1Q8N3D4 1523 aa6.14□□□□□ -1.43
SMARCE1-215ENST00000578995 ITSN2Q9NZM3 1697 aa6.14□□□□□ -1.43
SMARCE1-215ENST00000578995 RICTORQ6R327 1708 aa6.13□□□□□ -1.43
SMARCE1-215ENST00000578995 SUPT6HQ7KZ85 1726 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-215ENST00000578995 WNT7AO00755 349 aa6.13□□□□□ -1.43
SMARCE1-215ENST00000578995 FCF1Q9Y324 198 aaKnown RBP6.13□□□□□ -1.43
SMARCE1-215ENST00000578995 ARAP3Q8WWN8 1544 aa6.13□□□□□ -1.43
SMARCE1-215ENST00000578995 FRMPD1Q5SYB0 1578 aa6.13□□□□□ -1.43
SMARCE1-215ENST00000578995 ZBTB24O43167 697 aaPredicted RBP6.12□□□□□ -1.43
SMARCE1-215ENST00000578995 GDF11O95390 407 aa6.12□□□□□ -1.43
SMARCE1-215ENST00000578995 DNAJB2P25686 324 aa6.12□□□□□ -1.43
SMARCE1-215ENST00000578995 GSK3AP49840 483 aa6.12□□□□□ -1.43
SMARCE1-215ENST00000578995 TROQ12816 1431 aaPredicted RBP6.12□□□□□ -1.43
SMARCE1-215ENST00000578995 XP32Q5T750 250 aa6.12□□□□□ -1.43
SMARCE1-215ENST00000578995 CFAP74Q9C0B2 1584 aa6.11□□□□□ -1.43
SMARCE1-215ENST00000578995 ERBB4Q15303 1308 aa6.11□□□□□ -1.43
SMARCE1-215ENST00000578995 TTBK1Q5TCY1 1321 aaPredicted RBP6.11□□□□□ -1.43
SMARCE1-215ENST00000578995 SAMD9LQ8IVG5 1584 aa6.1□□□□□ -1.43
SMARCE1-215ENST00000578995 LRRC9Q6ZRR7 1453 aa6.1□□□□□ -1.43
SMARCE1-215ENST00000578995 OSBPP22059 807 aa6.1□□□□□ -1.43
SMARCE1-215ENST00000578995 VEGFBP49765 207 aa6.1□□□□□ -1.43
SMARCE1-215ENST00000578995 SIGLEC1Q9BZZ2 1709 aa6.09□□□□□ -1.43
SMARCE1-215ENST00000578995 J3QL48 77 aa6.09□□□□□ -1.43
SMARCE1-215ENST00000578995 RASSF7Q02833 373 aa6.09□□□□□ -1.43
SMARCE1-215ENST00000578995 HPS1Q92902 700 aa6.09□□□□□ -1.43
SMARCE1-215ENST00000578995 TMEM134Q9H6X4 195 aa6.09□□□□□ -1.43
SMARCE1-215ENST00000578995 NPDC1Q9NQX5 325 aaPredicted RBP6.09□□□□□ -1.43
SMARCE1-215ENST00000578995 CROCC2H7BZ55 1655 aa6.09□□□□□ -1.43
SMARCE1-215ENST00000578995 RNF225M0QZC1 329 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-215ENST00000578995 ABCC1P33527 1531 aa6.08□□□□□ -1.44
SMARCE1-215ENST00000578995 COL17A1Q9UMD9 1497 aaPredicted RBP6.08□□□□□ -1.44
SMARCE1-215ENST00000578995 KDM6BO15054 1643 aa6.07□□□□□ -1.44
SMARCE1-215ENST00000578995 ARID3CA6NKF2 412 aa6.07□□□□□ -1.44
SMARCE1-215ENST00000578995 RBM46Q8TBY0 533 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-215ENST00000578995 KRTAP4-8Q9BYQ9 185 aa6.07□□□□□ -1.44
SMARCE1-215ENST00000578995 GPATCH8Q9UKJ3 1502 aaKnown RBP6.07□□□□□ -1.44
SMARCE1-215ENST00000578995 NCOA2Q15596 1464 aa6.07□□□□□ -1.44
SMARCE1-215ENST00000578995 KDM5CP41229 1560 aa6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 ZMYM4Q5VZL5 1548 aa6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 IGHA1P01876 353 aa6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 MRGPRX2Q96LB1 330 aa6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 REPIN1Q9BWE0 567 aaKnown RBP6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 NEO1Q92859 1461 aa6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 ADGBQ8N7X0 1667 aa6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 PLCH2O75038 1416 aa6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 CD109Q6YHK3 1445 aa6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 KIDINS220Q9ULH0 1771 aa6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 INO80Q9ULG1 1556 aaPredicted RBP6.06□□□□□ -1.44
SMARCE1-215ENST00000578995 ARHGEF12Q9NZN5 1544 aa6.05□□□□□ -1.44
SMARCE1-215ENST00000578995 TEX14Q8IWB6 1497 aa6.05□□□□□ -1.44
SMARCE1-215ENST00000578995 SLC10A3P09131 477 aa6.05□□□□□ -1.44
SMARCE1-215ENST00000578995 FANCAO15360 1455 aa6.04□□□□□ -1.44
SMARCE1-215ENST00000578995 PTPN23Q9H3S7 1636 aa6.04□□□□□ -1.44
SMARCE1-215ENST00000578995 FAM69CQ0P6D2 419 aa6.04□□□□□ -1.44
SMARCE1-215ENST00000578995 PUS10Q3MIT2 529 aaKnown RBP6.04□□□□□ -1.44
SMARCE1-215ENST00000578995 KANK4Q5T7N3 995 aaPredicted RBP6.04□□□□□ -1.44
SMARCE1-215ENST00000578995 ARHGEF5Q12774 1597 aa6.04□□□□□ -1.44
SMARCE1-215ENST00000578995 SYCP2Q9BX26 1530 aa6.04□□□□□ -1.44
SMARCE1-215ENST00000578995 DNMT1P26358 1616 aaKnown RBP6.03□□□□□ -1.44
SMARCE1-215ENST00000578995 ABCA6Q8N139 1617 aa6.03□□□□□ -1.44
SMARCE1-215ENST00000578995 MAST1Q9Y2H9 1570 aa6.03□□□□□ -1.44
SMARCE1-215ENST00000578995 RSPH4AQ5TD94 716 aa6.03□□□□□ -1.44
SMARCE1-215ENST00000578995 ARHGAP5Q13017 1502 aa6.03□□□□□ -1.44
SMARCE1-215ENST00000578995 ARHGEF40Q8TER5 1519 aa6.03□□□□□ -1.44
SMARCE1-215ENST00000578995 MTUS2Q5JR59 1369 aa6.03□□□□□ -1.44
SMARCE1-215ENST00000578995 TCOF1Q13428 1488 aaKnown RBP6.02□□□□□ -1.44
SMARCE1-215ENST00000578995 BCORL1Q5H9F3 1711 aa6.02□□□□□ -1.45
SMARCE1-215ENST00000578995 HECW2Q9P2P5 1572 aa6.02□□□□□ -1.45
SMARCE1-215ENST00000578995 RCCD1A6NED2 376 aa6.02□□□□□ -1.45
SMARCE1-215ENST00000578995 PLEKHD1A6NEE1 506 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms