RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 BRD4O60885 1362 aaPredicted RBP21.45■■□□□ 1.02
IFT20-208ENST00000578985 USP6P35125 1406 aa21.45■■□□□ 1.02
IFT20-208ENST00000578985 CPSF1Q10570 1443 aaKnown RBP21.45■■□□□ 1.02
IFT20-208ENST00000578985 ZEB1P37275 1124 aaPredicted RBP21.44■■□□□ 1.02
IFT20-208ENST00000578985 HDGFL2Q7Z4V5 671 aaPredicted RBP21.43■■□□□ 1.02
IFT20-208ENST00000578985 TERF2IPQ9NYB0 399 aa21.43■■□□□ 1.02
IFT20-208ENST00000578985 KTN1Q86UP2 1357 aaKnown RBP21.43■■□□□ 1.02
IFT20-208ENST00000578985 LRP6O75581 1613 aa21.43■■□□□ 1.02
IFT20-208ENST00000578985 MON2Q7Z3U7 1717 aa21.43■■□□□ 1.02
IFT20-208ENST00000578985 CD163L1Q9NR16 1453 aa21.42■■□□□ 1.02
IFT20-208ENST00000578985 POLR3GLQ9BT43 218 aa21.41■■□□□ 1.02
IFT20-208ENST00000578985 SSH2Q76I76 1423 aa21.4■■□□□ 1.02
IFT20-208ENST00000578985 PLEKHG5O94827 1062 aa21.4■■□□□ 1.02
IFT20-208ENST00000578985 MEX3CQ5U5Q3 659 aaKnown RBP21.4■■□□□ 1.02
IFT20-208ENST00000578985 ABTB2Q8N961 1025 aa21.39■■□□□ 1.01
IFT20-208ENST00000578985 MYOM1P52179 1685 aa21.39■■□□□ 1.01
IFT20-208ENST00000578985 A0A1W2PP64 1363 aa21.38■■□□□ 1.01
IFT20-208ENST00000578985 TTC21BQ7Z4L5 1316 aa21.38■■□□□ 1.01
IFT20-208ENST00000578985 C11orf95C9JLR9 678 aaPredicted RBP21.38■■□□□ 1.01
IFT20-208ENST00000578985 NUTM2GQ5VZR2 741 aa21.38■■□□□ 1.01
IFT20-208ENST00000578985 CABLES1Q8TDN4 633 aa21.38■■□□□ 1.01
IFT20-208ENST00000578985 ABCA3Q99758 1704 aa21.38■■□□□ 1.01
IFT20-208ENST00000578985 NRKQ7Z2Y5 1582 aa21.37■■□□□ 1.01
IFT20-208ENST00000578985 ADAMTS2O95450 1211 aa21.37■■□□□ 1.01
IFT20-208ENST00000578985 HAP1P54257 671 aaPredicted RBP21.37■■□□□ 1.01
IFT20-208ENST00000578985 ANKRD36BQ8N2N9 1353 aa21.36■■□□□ 1.01
IFT20-208ENST00000578985 TTC21AQ8NDW8 1320 aa21.36■■□□□ 1.01
IFT20-208ENST00000578985 MARF1Q9Y4F3 1742 aaKnown RBP21.35■■□□□ 1.01
IFT20-208ENST00000578985 PHF23Q9BUL5 403 aaPredicted RBP21.35■■□□□ 1.01
IFT20-208ENST00000578985 EDC4Q6P2E9 1401 aaKnown RBP21.35■■□□□ 1.01
IFT20-208ENST00000578985 CRYBG1Q9Y4K1 1723 aa21.35■■□□□ 1.01
IFT20-208ENST00000578985 PIK3C2AO00443 1686 aa21.34■■□□□ 1.01
IFT20-208ENST00000578985 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.34■■□□□ 1.01
IFT20-208ENST00000578985 NLRP13Q86W25 1043 aa21.33■■□□□ 1.01
IFT20-208ENST00000578985 NLRP6P59044 892 aa21.32■■□□□ 1
IFT20-208ENST00000578985 KIF7Q2M1P5 1343 aa21.31■■□□□ 1
IFT20-208ENST00000578985 PHRF1Q9P1Y6 1649 aaKnown RBP21.31■■□□□ 1
IFT20-208ENST00000578985 C8orf37Q96NL8 207 aa21.31■■□□□ 1
IFT20-208ENST00000578985 NGLY1Q96IV0 654 aa21.3■■□□□ 1
IFT20-208ENST00000578985 USP19O94966 1318 aa21.29■■□□□ 1
IFT20-208ENST00000578985 NME9Q86XW9 330 aa21.29■■□□□ 1
IFT20-208ENST00000578985 CARD14Q9BXL6 1004 aa21.27■■□□□ 1
IFT20-208ENST00000578985 ZRANB1Q9UGI0 708 aa21.27■■□□□ 1
IFT20-208ENST00000578985 AFF2P51816 1311 aa21.27■□□□□ 0.99
IFT20-208ENST00000578985 CCDC7Q96M83 1385 aa21.26■□□□□ 0.99
IFT20-208ENST00000578985 USP31Q70CQ4 1352 aa21.25■□□□□ 0.99
IFT20-208ENST00000578985 USP54Q70EL1 1684 aa21.25■□□□□ 0.99
IFT20-208ENST00000578985 GCP02774 474 aa21.25■□□□□ 0.99
IFT20-208ENST00000578985 RGS17Q9UGC6 210 aaPredicted RBP21.25■□□□□ 0.99
IFT20-208ENST00000578985 WASHC2AQ641Q2 1341 aa21.25■□□□□ 0.99
IFT20-208ENST00000578985 SLIT3O75094 1523 aa21.24■□□□□ 0.99
IFT20-208ENST00000578985 NSD3Q9BZ95 1437 aa21.24■□□□□ 0.99
IFT20-208ENST00000578985 ZC3H6P61129 1189 aaKnown RBP21.24■□□□□ 0.99
IFT20-208ENST00000578985 PANK3Q9H999 370 aa21.24■□□□□ 0.99
IFT20-208ENST00000578985 KIF20BQ96Q89 1820 aa21.23■□□□□ 0.99
IFT20-208ENST00000578985 FAM83GA6ND36 823 aa21.23■□□□□ 0.99
IFT20-208ENST00000578985 ZNF772Q68DY9 489 aaPredicted RBP21.23■□□□□ 0.99
IFT20-208ENST00000578985 FNBP4Q8N3X1 1017 aaPredicted RBP21.23■□□□□ 0.99
IFT20-208ENST00000578985 PRDM11Q9NQV5 511 aa21.22■□□□□ 0.99
IFT20-208ENST00000578985 COL14A1Q05707 1796 aaKnown RBP21.22■□□□□ 0.99
IFT20-208ENST00000578985 KIAA0232Q92628 1395 aa21.22■□□□□ 0.99
IFT20-208ENST00000578985 KCNH5Q8NCM2 988 aa21.21■□□□□ 0.99
IFT20-208ENST00000578985 PLCH1Q4KWH8 1693 aa21.21■□□□□ 0.99
IFT20-208ENST00000578985 FYB1O15117 783 aa21.2■□□□□ 0.98
IFT20-208ENST00000578985 USP21Q9UK80 565 aa21.2■□□□□ 0.98
IFT20-208ENST00000578985 OVOS2A0A0J9YW53 1432 aa21.2■□□□□ 0.98
IFT20-208ENST00000578985 OVOS2Q6IE36 1432 aa21.2■□□□□ 0.98
IFT20-208ENST00000578985 SLIT2O94813 1529 aa21.19■□□□□ 0.98
IFT20-208ENST00000578985 NWD2Q9ULI1 1742 aa21.19■□□□□ 0.98
IFT20-208ENST00000578985 SOX12O15370 315 aa21.19■□□□□ 0.98
IFT20-208ENST00000578985 CHRNA2Q15822 529 aa21.19■□□□□ 0.98
IFT20-208ENST00000578985 COG3Q96JB2 828 aa21.19■□□□□ 0.98
IFT20-208ENST00000578985 CPDO75976 1380 aa21.19■□□□□ 0.98
IFT20-208ENST00000578985 POTEAQ6S8J7 498 aa21.18■□□□□ 0.98
IFT20-208ENST00000578985 GGNBP2Q9H3C7 697 aa21.18■□□□□ 0.98
IFT20-208ENST00000578985 CGNL1Q0VF96 1302 aa21.17■□□□□ 0.98
IFT20-208ENST00000578985 NFAT5O94916 1531 aa21.17■□□□□ 0.98
IFT20-208ENST00000578985 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.16■□□□□ 0.98
IFT20-208ENST00000578985 BCL9LQ86UU0 1499 aa21.16■□□□□ 0.98
IFT20-208ENST00000578985 ZBTB7CA1YPR0 619 aa21.16■□□□□ 0.98
IFT20-208ENST00000578985 UNC5CLQ8IV45 518 aa21.16■□□□□ 0.98
IFT20-208ENST00000578985 QTRT2Q9H974 415 aaKnown RBP21.15■□□□□ 0.98
IFT20-208ENST00000578985 BTG4Q9NY30 223 aa21.15■□□□□ 0.98
IFT20-208ENST00000578985 ARHGEF25Q86VW2 580 aa21.14■□□□□ 0.97
IFT20-208ENST00000578985 TRPC5Q9UL62 973 aaPredicted RBP21.14■□□□□ 0.97
IFT20-208ENST00000578985 KNSTRNQ9Y448 316 aa21.14■□□□□ 0.97
IFT20-208ENST00000578985 NRAPQ86VF7 1730 aa21.13■□□□□ 0.97
IFT20-208ENST00000578985 LTN1O94822 1766 aa21.13■□□□□ 0.97
IFT20-208ENST00000578985 LMO7Q8WWI1 1683 aa21.12■□□□□ 0.97
IFT20-208ENST00000578985 COL18A1P39060 1754 aa21.12■□□□□ 0.97
IFT20-208ENST00000578985 ANKRD26Q9UPS8 1709 aa21.12■□□□□ 0.97
IFT20-208ENST00000578985 ATRNO75882 1429 aa21.12■□□□□ 0.97
IFT20-208ENST00000578985 AATKQ6ZMQ8 1374 aa21.11■□□□□ 0.97
IFT20-208ENST00000578985 CAMTA1Q9Y6Y1 1673 aa21.1■□□□□ 0.97
IFT20-208ENST00000578985 RGPD5Q99666 1765 aa21.1■□□□□ 0.97
IFT20-208ENST00000578985 RXRBP28702 533 aa21.09■□□□□ 0.97
IFT20-208ENST00000578985 PER1O15534 1290 aaPredicted RBP21.08■□□□□ 0.97
IFT20-208ENST00000578985 EVA1CP58658 441 aa21.08■□□□□ 0.97
IFT20-208ENST00000578985 VPS72Q15906 364 aa21.08■□□□□ 0.97
IFT20-208ENST00000578985 NSD2O96028 1365 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms