RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 CCDC146Q8IYE0 955 aa26.89■■□□□ 1.9
SMG8-203ENST00000578922 NALCNQ8IZF0 1738 aa26.88■■□□□ 1.89
SMG8-203ENST00000578922 CFAP53Q96M91 514 aa26.87■■□□□ 1.89
SMG8-203ENST00000578922 NGDNQ8NEJ9 315 aaKnown RBP26.85■■□□□ 1.89
SMG8-203ENST00000578922 INSRP06213 1382 aa26.85■■□□□ 1.89
SMG8-203ENST00000578922 RBM19Q9Y4C8 960 aaKnown RBP26.84■■□□□ 1.89
SMG8-203ENST00000578922 PROSER2Q86WR7 435 aaPredicted RBP26.83■■□□□ 1.89
SMG8-203ENST00000578922 FMN2Q9NZ56 1722 aa26.83■■□□□ 1.89
SMG8-203ENST00000578922 TTC21BQ7Z4L5 1316 aa26.83■■□□□ 1.89
SMG8-203ENST00000578922 ANP32EQ9BTT0 268 aa26.82■■□□□ 1.88
SMG8-203ENST00000578922 USP6P35125 1406 aa26.82■■□□□ 1.88
SMG8-203ENST00000578922 COG3Q96JB2 828 aa26.82■■□□□ 1.88
SMG8-203ENST00000578922 LMTK3Q96Q04 1460 aa26.82■■□□□ 1.88
SMG8-203ENST00000578922 SHPRHQ149N8 1683 aa26.81■■□□□ 1.88
SMG8-203ENST00000578922 PPM1GO15355 546 aaPredicted RBP26.81■■□□□ 1.88
SMG8-203ENST00000578922 ADGRL3Q9HAR2 1447 aa26.81■■□□□ 1.88
SMG8-203ENST00000578922 ANKARQ7Z5J8 1434 aa26.81■■□□□ 1.88
SMG8-203ENST00000578922 NWD1Q149M9 1564 aa26.8■■□□□ 1.88
SMG8-203ENST00000578922 NRKQ7Z2Y5 1582 aa26.78■■□□□ 1.88
SMG8-203ENST00000578922 POLKQ9UBT6 870 aa26.77■■□□□ 1.88
SMG8-203ENST00000578922 APAF1O14727 1248 aa26.75■■□□□ 1.87
SMG8-203ENST00000578922 NUDCQ9Y266 331 aa26.75■■□□□ 1.87
SMG8-203ENST00000578922 PPP4R2Q9NY27 417 aa26.75■■□□□ 1.87
SMG8-203ENST00000578922 EMILIN1Q9Y6C2 1016 aa26.75■■□□□ 1.87
SMG8-203ENST00000578922 SMG6Q86US8 1419 aaKnown RBP26.74■■□□□ 1.87
SMG8-203ENST00000578922 U2AF1L5P0DN76 240 aaPredicted RBP26.74■■□□□ 1.87
SMG8-203ENST00000578922 U2AF1Q01081 240 aaKnown RBP eCLIP26.74■■□□□ 1.87
SMG8-203ENST00000578922 U2SURPO15042 1029 aaKnown RBP26.74■■□□□ 1.87
SMG8-203ENST00000578922 RRS1Q15050 365 aaKnown RBP26.73■■□□□ 1.87
SMG8-203ENST00000578922 ESCO1Q5FWF5 840 aa26.73■■□□□ 1.87
SMG8-203ENST00000578922 CDCA7LQ96GN5 454 aa26.73■■□□□ 1.87
SMG8-203ENST00000578922 PHF8Q9UPP1 1060 aa26.73■■□□□ 1.87
SMG8-203ENST00000578922 SSH2Q76I76 1423 aa26.72■■□□□ 1.87
SMG8-203ENST00000578922 SOX12O15370 315 aa26.72■■□□□ 1.87
SMG8-203ENST00000578922 MAP2P11137 1827 aaKnown RBP26.72■■□□□ 1.87
SMG8-203ENST00000578922 COL3A1P02461 1466 aaPredicted RBP26.71■■□□□ 1.87
SMG8-203ENST00000578922 STRCP1A6NGW2 1772 aa26.7■■□□□ 1.86
SMG8-203ENST00000578922 DIAPH1O60610 1272 aaKnown RBP26.69■■□□□ 1.86
SMG8-203ENST00000578922 PAK3O75914 559 aaPredicted RBP26.68■■□□□ 1.86
SMG8-203ENST00000578922 TTC21AQ8NDW8 1320 aa26.68■■□□□ 1.86
SMG8-203ENST00000578922 TMEM94Q12767 1356 aa26.68■■□□□ 1.86
SMG8-203ENST00000578922 OVOS2A0A0J9YW53 1432 aa26.68■■□□□ 1.86
SMG8-203ENST00000578922 OVOS2Q6IE36 1432 aa26.68■■□□□ 1.86
SMG8-203ENST00000578922 STRCQ7RTU9 1775 aa26.68■■□□□ 1.86
SMG8-203ENST00000578922 PNPLA6Q8IY17 1366 aa26.67■■□□□ 1.86
SMG8-203ENST00000578922 NUTM2GQ5VZR2 741 aa26.67■■□□□ 1.86
SMG8-203ENST00000578922 ORAI2Q96SN7 254 aa26.67■■□□□ 1.86
SMG8-203ENST00000578922 AATKQ6ZMQ8 1374 aa26.67■■□□□ 1.86
SMG8-203ENST00000578922 PDE3BQ13370 1112 aa26.67■■□□□ 1.86
SMG8-203ENST00000578922 RUNDC1Q96C34 613 aa26.66■■□□□ 1.86
SMG8-203ENST00000578922 IRX6P78412 446 aaPredicted RBP26.65■■□□□ 1.86
SMG8-203ENST00000578922 NEUROD2Q15784 382 aa26.65■■□□□ 1.86
SMG8-203ENST00000578922 C19orf44Q9H6X5 657 aa26.65■■□□□ 1.86
SMG8-203ENST00000578922 RRP7AQ9Y3A4 280 aaKnown RBP26.65■■□□□ 1.86
SMG8-203ENST00000578922 NLRP6P59044 892 aa26.63■■□□□ 1.85
SMG8-203ENST00000578922 PSME1Q06323 249 aa26.62■■□□□ 1.85
SMG8-203ENST00000578922 TCP11L2Q8N4U5 519 aa26.62■■□□□ 1.85
SMG8-203ENST00000578922 PIK3C2AO00443 1686 aa26.61■■□□□ 1.85
SMG8-203ENST00000578922 ABTB2Q8N961 1025 aa26.61■■□□□ 1.85
SMG8-203ENST00000578922 ZNF521Q96K83 1311 aa26.61■■□□□ 1.85
SMG8-203ENST00000578922 XPCQ01831 940 aaPredicted RBP26.6■■□□□ 1.85
SMG8-203ENST00000578922 FOXO3O43524 673 aa26.6■■□□□ 1.85
SMG8-203ENST00000578922 ATF3P18847 181 aa26.59■■□□□ 1.85
SMG8-203ENST00000578922 CDK12Q9NYV4 1490 aaPredicted RBP26.59■■□□□ 1.85
SMG8-203ENST00000578922 FANCIQ9NVI1 1328 aa26.59■■□□□ 1.85
SMG8-203ENST00000578922 USP31Q70CQ4 1352 aa26.58■■□□□ 1.84
SMG8-203ENST00000578922 ZNF335Q9H4Z2 1342 aaPredicted RBP26.57■■□□□ 1.84
SMG8-203ENST00000578922 GOLGA2Q08379 1002 aa26.57■■□□□ 1.84
SMG8-203ENST00000578922 IQSEC2Q5JU85 1478 aa26.56■■□□□ 1.84
SMG8-203ENST00000578922 C1orf167Q5SNV9 1468 aa26.56■■□□□ 1.84
SMG8-203ENST00000578922 IL13P35225 146 aa26.56■■□□□ 1.84
SMG8-203ENST00000578922 HMOX1P09601 288 aa26.55■■□□□ 1.84
SMG8-203ENST00000578922 PLEKHF1Q96S99 279 aa26.55■■□□□ 1.84
SMG8-203ENST00000578922 DMRT2Q9Y5R5 561 aa26.55■■□□□ 1.84
SMG8-203ENST00000578922 WWC1Q8IX03 1113 aa26.53■■□□□ 1.84
SMG8-203ENST00000578922 SPINK5Q9NQ38 1064 aaPredicted RBP26.53■■□□□ 1.84
SMG8-203ENST00000578922 MAP3K19Q56UN5 1328 aa26.53■■□□□ 1.84
SMG8-203ENST00000578922 PLEKHG5O94827 1062 aa26.53■■□□□ 1.84
SMG8-203ENST00000578922 MAPK8IP3Q9UPT6 1336 aa26.52■■□□□ 1.84
SMG8-203ENST00000578922 HSP90AB2PQ58FF8 381 aa26.52■■□□□ 1.84
SMG8-203ENST00000578922 MST1RQ04912 1400 aa26.5■■□□□ 1.83
SMG8-203ENST00000578922 NGEFQ8N5V2 710 aa26.5■■□□□ 1.83
SMG8-203ENST00000578922 RNF123Q5XPI4 1314 aa26.5■■□□□ 1.83
SMG8-203ENST00000578922 PEAK1Q9H792 1746 aa26.5■■□□□ 1.83
SMG8-203ENST00000578922 PRKAR2BP31323 418 aa26.5■■□□□ 1.83
SMG8-203ENST00000578922 SLFN5Q08AF3 891 aa26.5■■□□□ 1.83
SMG8-203ENST00000578922 DUSP27Q5VZP5 1158 aa26.5■■□□□ 1.83
SMG8-203ENST00000578922 LMOD2Q6P5Q4 547 aa26.5■■□□□ 1.83
SMG8-203ENST00000578922 RCAN3Q9UKA8 241 aa26.5■■□□□ 1.83
SMG8-203ENST00000578922 MSH6P52701 1360 aa26.49■■□□□ 1.83
SMG8-203ENST00000578922 NCOA3Q9Y6Q9 1424 aa26.49■■□□□ 1.83
SMG8-203ENST00000578922 EIF4A2Q14240 407 aaKnown RBP26.49■■□□□ 1.83
SMG8-203ENST00000578922 RSPH6AQ9H0K4 717 aa26.49■■□□□ 1.83
SMG8-203ENST00000578922 FCHSD2O94868 740 aa26.48■■□□□ 1.83
SMG8-203ENST00000578922 LRRC7Q96NW7 1537 aa26.48■■□□□ 1.83
SMG8-203ENST00000578922 CADPS2Q86UW7 1296 aa26.48■■□□□ 1.83
SMG8-203ENST00000578922 DDX17Q92841 729 aaKnown RBP26.48■■□□□ 1.83
SMG8-203ENST00000578922 MARF1Q9Y4F3 1742 aaKnown RBP26.48■■□□□ 1.83
SMG8-203ENST00000578922 AMPHP49418 695 aa26.47■■□□□ 1.83
SMG8-203ENST00000578922 KRT28Q7Z3Y7 464 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms