RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
GGA3-206ENST00000578773 PHF8Q9UPP1 1060 aa17.18■□□□□ 0.34
GGA3-206ENST00000578773 RGPD3A6NKT7 1758 aaPredicted RBP17.17■□□□□ 0.34
GGA3-206ENST00000578773 RGPD4Q7Z3J3 1758 aa17.17■□□□□ 0.34
GGA3-206ENST00000578773 ARHGEF10O15013 1369 aa17.17■□□□□ 0.34
GGA3-206ENST00000578773 VGFO15240 615 aaPredicted RBP17.17■□□□□ 0.34
GGA3-206ENST00000578773 FAM196AQ6ZSG2 479 aa17.17■□□□□ 0.34
GGA3-206ENST00000578773 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
GGA3-206ENST00000578773 PHRF1Q9P1Y6 1649 aaKnown RBP17.17■□□□□ 0.34
GGA3-206ENST00000578773 NBPF8Q3BBV2 869 aa17.16■□□□□ 0.34
GGA3-206ENST00000578773 NBPF14Q5TI25 921 aa17.16■□□□□ 0.34
GGA3-206ENST00000578773 SHANK3Q9BYB0 1731 aa17.16■□□□□ 0.34
GGA3-206ENST00000578773 PEAK1Q9H792 1746 aa17.15■□□□□ 0.34
GGA3-206ENST00000578773 SPATA31A1Q5TZJ5 1347 aa17.15■□□□□ 0.34
GGA3-206ENST00000578773 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
GGA3-206ENST00000578773 PTGER2P43116 358 aa17.14■□□□□ 0.33
GGA3-206ENST00000578773 TMEM132EQ6IEE7 984 aa17.14■□□□□ 0.33
GGA3-206ENST00000578773 ADGRF5Q8IZF2 1346 aa17.14■□□□□ 0.33
GGA3-206ENST00000578773 PSME1Q06323 249 aa17.13■□□□□ 0.33
GGA3-206ENST00000578773 PMFBP1Q8TBY8 1022 aa17.13■□□□□ 0.33
GGA3-206ENST00000578773 GOLGB1Q14789 3259 aaKnown RBP17.12■□□□□ 0.33
GGA3-206ENST00000578773 PARP4Q9UKK3 1724 aaKnown RBP17.1■□□□□ 0.33
GGA3-206ENST00000578773 APLP2Q06481 763 aa17.1■□□□□ 0.33
GGA3-206ENST00000578773 CHRNA2Q15822 529 aa17.1■□□□□ 0.33
GGA3-206ENST00000578773 FHDC1Q9C0D6 1143 aaPredicted RBP17.1■□□□□ 0.33
GGA3-206ENST00000578773 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
GGA3-206ENST00000578773 ITGAEP38570 1179 aa17.09■□□□□ 0.33
GGA3-206ENST00000578773 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
GGA3-206ENST00000578773 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
GGA3-206ENST00000578773 ABCC11Q96J66 1382 aa17.09■□□□□ 0.33
GGA3-206ENST00000578773 PTF1AQ7RTS3 328 aa17.08■□□□□ 0.32
GGA3-206ENST00000578773 SYT17Q9BSW7 474 aa17.08■□□□□ 0.32
GGA3-206ENST00000578773 DLC1Q96QB1 1528 aa17.07■□□□□ 0.32
GGA3-206ENST00000578773 YTHDC2Q9H6S0 1430 aaKnown RBP17.07■□□□□ 0.32
GGA3-206ENST00000578773 GIGYF1O75420 1035 aaPredicted RBP17.07■□□□□ 0.32
GGA3-206ENST00000578773 KIAA0232Q92628 1395 aa17.06■□□□□ 0.32
GGA3-206ENST00000578773 PRDM11Q9NQV5 511 aa17.06■□□□□ 0.32
GGA3-206ENST00000578773 RPGRIP1LQ68CZ1 1315 aa17.05■□□□□ 0.32
GGA3-206ENST00000578773 LMO7Q8WWI1 1683 aa17.04■□□□□ 0.32
GGA3-206ENST00000578773 LRRC37A3O60309 1634 aa17.04■□□□□ 0.32
GGA3-206ENST00000578773 SAFB2Q14151 953 aaKnown RBP eCLIP17.04■□□□□ 0.32
GGA3-206ENST00000578773 WNK3Q9BYP7 1800 aa17.03■□□□□ 0.32
GGA3-206ENST00000578773 PDE3BQ13370 1112 aa17.03■□□□□ 0.32
GGA3-206ENST00000578773 SSH2Q76I76 1423 aa17.03■□□□□ 0.32
GGA3-206ENST00000578773 PROM2Q8N271 834 aa17.01■□□□□ 0.31
GGA3-206ENST00000578773 SGIP1Q9BQI5 828 aa17.01■□□□□ 0.31
GGA3-206ENST00000578773 AKAP12Q02952 1782 aa17■□□□□ 0.31
GGA3-206ENST00000578773 PIK3C2GO75747 1445 aa17■□□□□ 0.31
GGA3-206ENST00000578773 PRR36Q9H6K5 1346 aa16.99■□□□□ 0.31
GGA3-206ENST00000578773 ACIN1Q9UKV3 1341 aaKnown RBP16.99■□□□□ 0.31
GGA3-206ENST00000578773 LARP1Q6PKG0 1096 aaKnown RBP16.99■□□□□ 0.31
GGA3-206ENST00000578773 ANKARQ7Z5J8 1434 aa16.98■□□□□ 0.31
GGA3-206ENST00000578773 ZC3H6P61129 1189 aaKnown RBP16.98■□□□□ 0.31
GGA3-206ENST00000578773 BARGINQ6ZT62 677 aa16.98■□□□□ 0.31
GGA3-206ENST00000578773 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
GGA3-206ENST00000578773 RGL3Q3MIN7 710 aa16.95■□□□□ 0.3
GGA3-206ENST00000578773 SPATA31E1Q6ZUB1 1445 aa16.95■□□□□ 0.3
GGA3-206ENST00000578773 ATP7BP35670 1465 aa16.94■□□□□ 0.3
GGA3-206ENST00000578773 PAK3O75914 559 aaPredicted RBP16.94■□□□□ 0.3
GGA3-206ENST00000578773 NUTM2GQ5VZR2 741 aa16.94■□□□□ 0.3
GGA3-206ENST00000578773 PRAM1Q96QH2 718 aa16.94■□□□□ 0.3
GGA3-206ENST00000578773 OVOS2A0A0G2JMS6 1433 aa16.94■□□□□ 0.3
GGA3-206ENST00000578773 OVOS2A0A0J9YW53 1432 aa16.94■□□□□ 0.3
GGA3-206ENST00000578773 OVOS2Q6IE36 1432 aa16.94■□□□□ 0.3
GGA3-206ENST00000578773 PAPPAQ13219 1627 aa16.93■□□□□ 0.3
GGA3-206ENST00000578773 GPRASP1Q5JY77 1395 aa16.93■□□□□ 0.3
GGA3-206ENST00000578773 PLSCR1O15162 318 aa16.93■□□□□ 0.3
GGA3-206ENST00000578773 HIRIP3Q9BW71 556 aaPredicted RBP16.93■□□□□ 0.3
GGA3-206ENST00000578773 TUBGCP6Q96RT7 1819 aa16.93■□□□□ 0.3
GGA3-206ENST00000578773 ITSN1Q15811 1721 aa16.93■□□□□ 0.3
GGA3-206ENST00000578773 TULP4Q9NRJ4 1543 aa16.92■□□□□ 0.3
GGA3-206ENST00000578773 TCP11L2Q8N4U5 519 aa16.92■□□□□ 0.3
GGA3-206ENST00000578773 TOPAZ1Q8N9V7 1692 aa16.91■□□□□ 0.3
GGA3-206ENST00000578773 COL24A1Q17RW2 1714 aa16.91■□□□□ 0.3
GGA3-206ENST00000578773 GPR162Q16538 588 aa16.91■□□□□ 0.3
GGA3-206ENST00000578773 SIRT1Q96EB6 747 aa16.9■□□□□ 0.3
GGA3-206ENST00000578773 EVA1CP58658 441 aa16.89■□□□□ 0.29
GGA3-206ENST00000578773 ARXQ96QS3 562 aa16.89■□□□□ 0.29
GGA3-206ENST00000578773 MTFR1LQ9H019 292 aa16.89■□□□□ 0.29
GGA3-206ENST00000578773 RGPD5Q99666 1765 aa16.89■□□□□ 0.29
GGA3-206ENST00000578773 MAP3K5Q99683 1374 aa16.89■□□□□ 0.29
GGA3-206ENST00000578773 COL5A2P05997 1499 aaPredicted RBP16.88■□□□□ 0.29
GGA3-206ENST00000578773 SLC15A2Q16348 729 aa16.88■□□□□ 0.29
GGA3-206ENST00000578773 PELP1Q8IZL8 1130 aaKnown RBP16.88■□□□□ 0.29
GGA3-206ENST00000578773 CFAP70Q5T0N1 1121 aa16.87■□□□□ 0.29
GGA3-206ENST00000578773 STK32BQ9NY57 414 aa16.87■□□□□ 0.29
GGA3-206ENST00000578773 DHX57Q6P158 1386 aaKnown RBP16.87■□□□□ 0.29
GGA3-206ENST00000578773 ANKRD30BQ9BXX2 1392 aa16.87■□□□□ 0.29
GGA3-206ENST00000578773 TXNRD1Q16881 649 aa16.86■□□□□ 0.29
GGA3-206ENST00000578773 MINK1Q8N4C8 1332 aaPredicted RBP16.86■□□□□ 0.29
GGA3-206ENST00000578773 ATP10DQ9P241 1426 aa16.86■□□□□ 0.29
GGA3-206ENST00000578773 KLHL34Q8N239 644 aa16.85■□□□□ 0.29
GGA3-206ENST00000578773 HSPA6P17066 643 aa16.84■□□□□ 0.29
GGA3-206ENST00000578773 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
GGA3-206ENST00000578773 NLGN2Q8NFZ4 835 aa16.84■□□□□ 0.29
GGA3-206ENST00000578773 ADGRB1O14514 1584 aa16.83■□□□□ 0.28
GGA3-206ENST00000578773 BTAF1O14981 1849 aa16.83■□□□□ 0.28
GGA3-206ENST00000578773 COL18A1P39060 1754 aa16.83■□□□□ 0.28
GGA3-206ENST00000578773 QSER1Q2KHR3 1735 aa16.83■□□□□ 0.28
GGA3-206ENST00000578773 NHSQ6T4R5 1651 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms